Martin Bohun Hormann mbohun

ala-cas
ala-cas-client
ala-downloads
ala-expert java.io.FileNotFoundException: /var/log/tomcat6/expert.log (No such file or directory)
ala-fieldguide
ala-hub
ala-install
ala-logger
ala-logger-service
ala-name-matching

####problem Add travis support to ALA projects

####solution Our projects can be devided into 3 categories:

java/mvn/jenkins-mvn-project-plugin
grails with maven-publisher
grails with scp

#####1. java/mvn/jenkins-mv-plugin

##Intro The ALA applications/components can be divided into 3 diff groups/types according to the build system they use:

jenkins-mvn/maven - maven project, build with maven, deployed into a maven repo using hudons/jenkins maven plugin
grails-mvn - grails project, build with grails, deployed into a maven repo using grails maven plugin
jenkins-scp - grails project, build with grails, resulting .war scp into a maven repo using hudson/jenkins scp plugin

jenkins-mvn/maven	grails-mvn	jenkins-scp
ala-cas	ala-downloads	ala-expert

blah, blah, blah:

aaaa
bbbb
cccc

tr=plotTree(ax,type="fan",ftype="off") ## plot tree without labels
## add each image
library(jpeg)

Catalog Number	Scientific Name	Genus	Species	Latitude	Longitude	Event Date
A00001	Limnodynastes interioris	Limnodynastes	Limnodynastes interioris	-33.6333	147.45	8/12/1970
A00030	Bufo marinus	Rhinella	Rhinella marina	-21.1667	149.1917	6/05/1971
B00700	Eclectus roratus	Eclectus	Eclectus roratus	-12.7917	143.3	8/01/1966
B07625	Ailuroedus crassirostris	Ailuroedus	Ailuroedus crassirostris	-4.5083	142.6667	10/08/1966
R08920	Lampropholis guichenoti	Lampropholis	Lampropholis guichenoti	-37.075	149.4667	1/02/1995

example usage:

# execute github-add-travis.sh for one repo
./github-add-travis.sh collectory

# execute github-add-travis.sh for all/for each AtlasOfLivingAustralia github repo
./githubapi-get-all-repos.sh [github user or organization] [github token] | xargs ./github-add-travis.sh

repo	travis build status
ala-cas
ala-cas-client
ala-downloads
ala-expert
ala-hub	[![Build Status]

	# TODO: review this - and suggest some reasonable branching strategy if required/suitable

	# we are currently at version: 1.2-SNAPSHOT

	# get the grails module source
	git clone ala-module-in-grails
	cd ala-module-in-grails

	# preview what is about to happen
	mvn release:prepare -DdryRun=true

	# problem: vlc does not play mp4 files, error message:
	# No suitable decoder module: VLC does not support the audio or video format "h264".
	# Unfortunately there is no way for you to fix this.
	#
	# reason: the installed libautil52 from openSUSE13.1 distro repo is incompatible with /usr/lib64/vlc/plugins/codec/libavcodec_plugin.so
	# from vlc-codecs from the videolan.org repo
	#
	# solution: remove/uninstall libavutil52 from openSUSE13.1 repo
	sudo zypper rm libavutil52

	# download and install JDK

	# download and install sonatype nexus
	wget -c http://www.sonatype.org/downloads/nexus-latest-bundle.tar.gz
	sudo cp nexus-latest-bundle.tar.gz /usr/local
	cd /usr/local
	sudo tar -zxvf nexus-latest-bundle.tar.gz
	sudo ln -s nexus-2.9.1-02 nexus

	# the sonatype nexus howto seems to be incorrect (resp. incomplete), you need a non-root user that can run nexus in /usr/local