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$ ipcluster start -n4 --engines=MPIEngineSetLauncher
2013-05-23 19:40:39,864.864 [IPClusterStart] Using existing profile dir: u'/home/goldbaum/.ipython/profile_default'
2013-05-23 19:40:39.871 [IPClusterStart] Starting ipcluster with [daemon=False]
2013-05-23 19:40:39.872 [IPClusterStart] Creating pid file: /home/goldbaum/.ipython/profile_default/pid/ipcluster.pid
2013-05-23 19:40:39.873 [IPClusterStart] Starting Controller with LocalControllerLauncher
2013-05-23 19:40:40.872 [IPClusterStart] Starting 4 Engines with MPIEngineSetLauncher
2013-05-23 19:40:41.116 [IPClusterStart]
Engines shutdown early, they probably failed to connect.
Check the engine log files for output.
[goldbaum@astro-5-22 ~]$ mpirun -n 4 ipengine
2013-05-23 20:29:02,977.977 [IPEngineApp] Using existing profile dir: u'/home/goldbaum/.ipython/profile_default'
2013-05-23 20:29:02,979.979 [IPEngineApp] Using existing profile dir: u'/home/goldbaum/.ipython/profile_default'
2013-05-23 20:29:02.979 [IPEngineApp] url_file u'/home/goldbaum/.ipython/profile_default/security/ipcontroller-engine.json' not found
2013-05-23 20:29:02,979.979 [IPEngineApp] Using existing profile dir: u'/home/goldbaum/.ipython/profile_default'
2013-05-23 20:29:02.979 [IPEngineApp] Waiting up to 5.0 seconds for it to arrive.
2013-05-23 20:29:02,979.979 [IPEngineApp] Using existing profile dir: u'/home/goldbaum/.ipython/profile_default'
2013-05-23 20:29:02.980 [IPEngineApp] url_file u'/home/goldbaum/.ipython/profile_default/security/ipcontroller-engine.json' not found
2013-05-23 20:29:02.980 [IPEngineApp] Waiting up to 5.0 seconds for it to arrive.
2013-05-23 20:29:02.981 [IPEngineApp] url_file u'/home/goldbaum/.ipython/profile_default/secur
{
"url": "tcp://*:44003",
"exec_key": "2b653f0b-88c9-4f5f-bfb2-f45c6dbe828d",
"ssh": "",
"location": "128.114.126.225"
}
{
"stdin_port": 49971,
"ip": "127.0.0.1",
"hb_port": 44507,
"key": "b9ab9f77-d0a7-4b46-82bc-5ecc0845adb8",
"shell_port": 58990,
"iopub_port": 36240
}
@ngoldbaum
ngoldbaum / gist:6392792
Created August 30, 2013 18:18
h5py linking error on anaconda
goldbaum at ROUS in ~/Downloads/h5py-2.1.3
○ python setup.py install
running install
running build
running build_py
creating build
creating build/lib.macosx-10.5-x86_64-2.7
creating build/lib.macosx-10.5-x86_64-2.7/h5py
copying h5py/__init__.py -> build/lib.macosx-10.5-x86_64-2.7/h5py
copying h5py/api_gen.py -> build/lib.macosx-10.5-x86_64-2.7/h5py
This file has been truncated, but you can view the full file.
diff -r 079e456c38a8 -r 2d06aa201903 COPYING.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/COPYING.txt Mon Sep 09 14:13:42 2013 -0400
@@ -0,0 +1,81 @@
+===============================
+ The yt project licensing terms
+===============================
+
+yt is licensed under the terms of the Modified BSD License (also known as New
+or Revised BSD), as follows:
LDFLAGS=-arch x86_64
HDF5_DIR=/Users/goldbaum/anaconda/conda-bld/build_env
PY_VER=2.7
CXXFLAGS=-arch x86_64
CONDA_BUILD=1
PATH=/Users/goldbaum/anaconda/conda-bld/build_env/bin:/Users/goldbaum/anaconda/bin:/Users/goldbaum/yt-conda/bin:/usr/local/bin:/usr/local/sbin:/Users/goldbaum/Documents/charm/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/X11/bin:/usr/texbin:/Users/goldbaum/.cabal/bin
SRC_DIR=/Users/goldbaum/anaconda/conda-bld/work/h5py-2.2.0
PWD=/Users/goldbaum/anaconda/conda-bld/work/h5py-2.2.0
PY3K=0
STDLIB_DIR=/Users/goldbaum/anaconda/conda-bld/build_env/lib/python2.7
.SSSFS.................................................................................................................................................................................................................................................................................................................
======================================================================
FAIL: test_cppproj.test_all('PYTHONPATH="/Users/goldbaum/Documents/xdress" /usr/local/opt/python/bin/python2.7 /Users/goldbaum/Documents/xdress/scripts/xdress --debug -p=gccxml', '/Users/goldbaum/Documents/xdress/tests/cppproj', [1])
----------------------------------------------------------------------
Traceback (most recent call last):
File "/usr/local/lib/python2.7/site-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "/Users/goldbaum/Documents/xdress/tests/tools.py", line 45, in check_cmd
assert_equal(rtn, 0)
AssertionError: 1 != 0
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{
"metadata": {
"name": ""
},
"nbformat": 3,
"nbformat_minor": 0,
"worksheets": [
{
"cells": [
{