nutjob4life

# encoding: utf-8
#
# show-statements.py — print some RDF
#
# To use this:
#
# python3 -m venv venv
# venv/bin/pip install --quiet --upgrade pip setuptools rdflib
# venv/bin/python show-statements.py URL

nutjob4life

(Context: I've just completed the Wagtail for Beginners course and have an opportunity to leave a review. However my review's 1600 characters-or-so and the review box is limited to 1000 characters. So I'm posting it here.)

TL;DR: good course but where's search? ★★★★☆

Overall this is a pretty nice and fairly deep introduction to Wagtail. I'm using this course while simultaneously setting up a major Wagtail site (with an estimated 10,000 objects), so I'm not just learning the basics but also getting a thorough immersion. What's good about this approach is that topics Taulien introduces here are directly applicable to my project, such as using wagtail.contrib.settings classes for my custom control panels, or dividing Django configuration between dev and production, or how drop-dead easy it is to add a sitemap.xml endpoint, and so forth. I've had trouble understanding StreamFields ("Why not just use RichTextField for everything?") but Taulien helps

nutjob4life

while IFS='' read -r LINE || [ -n "${LINE}" ]; do
    echo "Downloading...: ${LINE}"
    basename "$LINE"
    f="$(basename -- $LINE)"
    curl  -H 'Authorization: Bearer xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx' "${LINE}" > $f
done <  files.csv

nutjob4life

# encoding: utf-8
#
# Sample LabCAS Download script
#
# To run this, you'll need Python 3 with the `requests` package. The easiest
# way to do this is with a "virtual environment" by running:
#
# $ python3 -m venv venv
# $ cd venv
# $ bin/pip install --quiet --upgrade pip requests

nutjob4life

2021-09-08 20:16:43.422 ERROR 46 --- [           main] o.s.boot.SpringApplication               : Application run failed

org.springframework.beans.factory.UnsatisfiedDependencyException: Error creating bean with name 'myBundlesApiController': Unsatisfied dependency expressed through field 'esRegistryConnection'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'esRegistryConnection' defined in class path resource [gov/nasa/pds/api/engineering/elasticsearch/ElasticSearchConfig.class]: Bean instantiation via factory method failed; nested exception is org.springframework.beans.BeanInstantiationException: Failed to instantiate [gov.nasa.pds.api.engineering.elasticsearch.ElasticSearchRegistryConnection]: Factory method 'ElasticSearchRegistryConnection' threw exception; nested exception is java.lang.RuntimeException: java.net.ConnectException: Connection refused
	at org.springframework.beans.factory.annotation.AutowiredAnnotationBeanPostProcessor$AutowiredF

nutjob4life

[INFO] --- spring-boot-maven-plugin:2.3.1.RELEASE:run (default-cli) @ registry-api-service ---
[INFO] Attaching agents: []
SLF4J: Class path contains multiple SLF4J bindings.
SLF4J: Found binding in [jar:file:/Users/kelly/.m2/repository/org/slf4j/slf4j-log4j12/1.7.30/slf4j-log4j12-1.7.30.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/Users/kelly/.m2/repository/ch/qos/logback/logback-classic/1.2.3/logback-classic-1.2.3.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation.
SLF4J: Actual binding is of type [org.slf4j.impl.Log4jLoggerFactory]
Exception in thread "main" java.lang.IllegalArgumentException: LoggerFactory is not a Logback LoggerContext but Logback is on the classpath. Either remove Logback or the competing implementation (class org.slf4j.impl.Log4jLoggerFactory loaded from file:/Users/kelly/.m2/repository/org/slf4j/slf4j-log4j12/1.7.30/slf4j-log4j12-1.7.30.jar). If you are using WebLogic you wil

nutjob4life

These are the podcasts I listen to and/or recommend, organized loosely by category. Updated 2021-06-05.

General Interest

• 99% Invisible
• Apple Events (video)
• Decoder Ring
• Endless Thread
• Everything Everywhere Daily

nutjob4life

SELECT
    biomarkers.id        AS 'BM ID',
    biomarker_names.name AS 'BM Name',
    organs.name          AS 'Organ',
    organ_data.phase     AS 'Organ phase',
    studies.FHCRC_ID     AS 'Protocol ID',
    studies.title        AS 'Protocol',
    study_data.phase     AS 'Protocol phase'
FROM
    biomarker_names,

nutjob4life

These are some good practices I've seen going around and they've worked for me.

Images should be small

→ Choose a base image carefully: do you need a full ubuntu when debian will work fine? Or better yet, consider alpine, which is one of the smallest Linux bases out there.

→ Always clean up after yourself. If you did something like:

RUN apt-get install -y maven subversion && svn checkout http://old.repo/old/code/tags/1.0.0 tags && cd 1.0.0 && mvn install

nutjob4life

--- /Users/kelly/.buildout/eggs/plone.recipe.zope2instance-4.4.1-py2.7.egg/plone/recipe/zope2instance/ctl.py	2020-06-10 10:04:50.000000000 -0500
+++ /tmp/ctl.py	2020-06-10 10:05:10.000000000 -0500
@@ -578,6 +578,7 @@
 
         if debug or zopectl.WIN:
             try:
+                command = ['/usr/local/opt/python@2/bin/python2.7', '-m', 'cProfile', '-o', '/tmp/stats', '/Users/kelly/Documents/Clients/JPL/Cancer/Portal/Development/P5/parts/zope-debug/bin/interpreter', '/Users/kelly/.buildout/eggs/Zope2-2.13.27-py2.7.egg/Zope2/Startup/run.py', '-C', '/Users/kelly/Documents/Clients/JPL/Cancer/Portal/Development/P5/parts/zope-debug/etc/zope.conf', '-X', 'debug-mode=on']
                 self._exitstatus = subprocess.call(command, env=env)
             except KeyboardInterrupt:
                 return