Nezar Abdennur nvictus

I hereby claim:

To claim this, I am signing this object:

	"\e[A": history-search-backward
	"\e[B": history-search-forward
	set show-all-if-ambiguous on
	set completion-ignore-case on

	# Notes
	# -----
	# * Cooler's stored bin IDs are 0-based. However, for consistency with R, this API should take
	# 1-based indexing as input for table row and matrix range queries.
	# * See Ilya's implementation: https://github.com/dozmorovlab/HiCcompare/issues/9
	library(hdf5r)
	library(dplyr)
	library(tibble)
	library(purrr)
	library(data.table)

	"""
	Forked from: https://gist.github.com/nokados/e8f0a64b55099f2f07a50f2b090c91c7

	Changes
	* Added slider control to scroll through pages of really large dataframes.
	* Reduce flicker by making events trigger widget element updates instead of
	clearing output and re-rendering.
	* Add support for dataframe CSS styling.
	* Register custom pandas accessor

	'''
	Non-parametric computation of entropy and mutual-information

	Adapted by G Varoquaux for code created by R Brette, itself
	from several papers (see in the code).

	These computations rely on nearest-neighbor statistics
	'''
	import numpy as np

	def geomprog(start, mul):
	"""
	Generate a geometric progression.

	Beginning with integer `start`, generate an unbounded geometric
	progression with ratio `mul`.

	"""
	start = int(start)
	yield start

	import numpy as np
	import pandas as pd


	def _probability_mat_to_information_mat(prob_df, bg_df):
	"""
	Converts a probability matrix to an information matrix.
	Taken from logomaker (https://github.com/jbkinney/logomaker).

	"""

	#!/usr/bin/env python
	import hashlib
	import os.path as op
	import os
	import re
	import warnings
	from contextlib import closing
	from urllib.parse import urlsplit
	from urllib.request import urlopen