obonyojimmy

var http = require('http');
var router = require('routes')();
var Busboy = require('busboy');
var AWS = require('aws-sdk');
var inspect = require('util').inspect;
var port = 5000;

// Define s3-upload-stream with S3 credentials.
var s3Stream = require('s3-upload-stream')(new AWS.S3({
  accessKeyId: '',

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"""Python 3 script to get partial protein HGVS given NCBI dbSNP ID

Example:

$ python3 protein_hgvs_for_snp_id.py 334
snp_id:
334
gene:
{'name': 'HBB', 'gene_id': '3043'}
protein_change_hgvs:

obonyojimmy

nginx-proxy:
  image: 'jwilder/nginx-proxy'
  ports:
    - '80:80'
    - '443:443'
  volumes:
    - '/path/to/certs:/etc/nginx/certs:ro'
    - '/etc/nginx/vhost.d'
    - '/usr/share/nginx/html'
    - '/var/run/docker.sock:/tmp/docker.sock:ro'

obonyojimmy

xmlp

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# By default, Docker containers run as the root user. This is bad because:
#   1) You're more likely to modify up settings that you shouldn't be
#   2) If an attacker gets access to your container - well, that's bad if they're root.
# Here's how you can run change a Docker container to run as a non-root user

## CREATE APP USER ##

# Create the home directory for the new app user.
RUN mkdir -p /home/app

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server {
  listen [::]:80;
  listen 80;

  server_name app.example.com;

  return 301 https://$server_name$request_uri;
}

server {

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# Image neeeds to have ssh-client
image: docker:git

services:
  - docker:dind

stages:
  - staging
before_script:
  - docker login -u gitlab-ci-token -p $CI_BUILD_TOKEN $CI_REGISTRY

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/**
 * Changes value to past tense.
 * Simple filter does not support irregular verbs such as eat-ate, fly-flew, etc.
 * http://jsfiddle.net/bryan_k/0xczme2r/
 *
 * @param {String} value The value string.
 */
Vue.filter('past-tense', function(value) {
  // Slightly follows http://www.oxforddictionaries.com/us/words/verb-tenses-adding-ed-and-ing
  var vowels = ['a', 'e', 'i', 'o', 'u'];

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container_commands:
  01_install_pma:
    test: test -n "$PMA_VER" && test ! -f /tmp/phpmyadmin.tar.gz
    command: |
      cd /tmp
      wget https://files.phpmyadmin.net/phpMyAdmin/${PMA_VER}/phpMyAdmin-${PMA_VER}-all-languages.tar.gz
      wget https://files.phpmyadmin.net/phpMyAdmin/${PMA_VER}/phpMyAdmin-${PMA_VER}-all-languages.tar.gz.sha1
      cd /tmp && sha1sum --check phpMyAdmin-${PMA_VER}-all-languages.tar.gz.sha1
      if [[ $? == 0 ]]
      then

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# The following script will deploy a Laravel 5 applicaion on AWS Elastic Beanstalk.
# Add to .ebextensions at the root of your application and name your commands file (e.g., commands.config)

# -------------------------------- Commands ------------------------------------
# Use "commands" key to execute commands on the EC2 instance. The commands are 
# processed in alphabetical order by name, and they run before the application 
# and web server are set up and the application version file is extracted. 
# ------------------------------------------------------------------------------
commands:
  01updateComposer: