omsai

import imagedisk
from datetime import datetime

id = imagedisk.iQImageDisk()

##print type(id[1091567616].getDateAndTimeObject())

date_min = datetime(2011, 3, 7)
date_max = datetime(2011, 3, 10)
no_flip_rotation = 0

omsai

import imagedisk
import logging

REPLACE_DOT_WITH_CHAR = '_' # Replace dot with underscore
LOG_FILENAME = 'iQ_filename_fixer.log'

id = imagedisk.iQImageDisk()
##logging.basicConfig(filename=LOG_FILENAME, level=logging.DEBUG)
logging.basicConfig(level=logging.DEBUG)

omsai

'''
Zip Andor iQ settings

Creates a zip file on the desktop containing:
- iQ settings folder
  C:\Documents and Settings\All Users\Application Data\Kinetic Imaging\
  C:\ProgramData\Kinetic Imaging\
- Configurations file
  C:\Program Files\Andor Bioimaging\Common Files\kiconfig.ini
  C:\Program Files (x86)\Andor Bioimaging\Common Files\kiconfig.ini

omsai

'''
Generate an Andor iQ .rgn file with a scalable and repositionable pattern of 
FRAPPA points
'''

# User variables
SENSOR_SIZE = [512, 512]
CENTER = [255,255]
SIDE_LENGTH = 360
POINT_SPACING = 20

omsai

# -*- coding: utf-8 -*-
'''
Serial LCD control

Control Sparkfun LCD-10097 with DEV-09716
'''

from serial import Serial
from time import sleep

omsai

# Resizes images in current folder for vandanashourie.com
# Saves images into sub-folders:
#   ./tabs-square    <- 150x150 thumbnauls
#   ./full           <- 725x525 images

import os, sys
import Image
import math

omsai

"""
Toggle safety shutter until open on Andor Laser Combiner
"""

from ctypes import windll, c_ulong, byref
from time  import sleep, clock
import sys

class DeVaSys:
    """Microcontroller board in Combiner controlling laser safety interlocks

omsai

/*
Calculate specimen width in pixels using a line profile

Requires:
- Single channel image stack
- Line profile drawn on image

Algorithm:
- Assumes a single signal level threashold
- Checks each line profile pixel intensity from the left for start

omsai

/*
Calculate specimen width in pixels using a line profile

Requires:
- Single channel image stack
- Line profile drawn on image

Output:
- Bitmap image stack of profile plots of original stack (not usable data!)
- Text file on desktop with numeric data with format:

omsai

/*
Arduino UNO reads rising edge trigger pulses on pin 2 and displays counter on 
Sparkfun SerLCD LCD-10097

Photo of setup: http://ompldr.org/vZGNlbA/photo.JPG

Pariksheet <[email protected]> Mar 2012
*/