pgjones’s gists

pgjones / edit_soc.py

Last active December 15, 2015 10:29

Load and edit a RAT SOC TTree in python

	import ROOT
	import rat
	import sys

	file_ = ROOT.TFile(sys.argv[1])
	tree = file_.Get("T")
	soc = ROOT.RAT.DS.SOC()
	run_tree = file.Get("runT")
	tree.SetBranchAddress("soc", soc)
	for iEntry in range(0, tree.GetEntries()):

pgjones / PlotOccupancy.cc

Created March 13, 2013 19:40

Plot the occupancy by lcn from a rat ds root file

pgjones / ExtractStoppingPower.cc

Last active December 11, 2015 17:29

	////////////////////////////////////////////////////////
	/// Extracts the stopping power of the primary track.
	/// P G Jones <[email protected]>
	///
	/// 02/01/2013 : New File
	////////////////////////////////////////////////////////

	#include <RAT/DS/Root.hh>
	#include <RAT/DS/MC.hh>
	#include <RAT/DS/Run.hh>

pgjones / plot_stopping_power.py

Last active October 12, 2015 14:08

Plot dE/dx from rat

	#!/usr/bin/env python
	# Plot the stopping power versus energy, and deposited energy versus distance travelled
	# Author P G Jones - 13/09/2012 <[email protected]>
	import ROOT
	import rat
	import time
	import sys
	import math

	def plot_file(file_name):

pgjones / Load.cc

Created October 8, 2012 13:13

Basic rat macros and code

	////////////////////////////////////////////////////////
	/// My preferred method to load a root file in root.
	/// Must load in root as .L Load.cc+
	///
	/// 11/10/2012 : New File
	////////////////////////////////////////////////////////

	#include <RAT/DS/Root.hh>
	#include <RAT/DS/EV.hh>
	#include <RAT/DS/Run.hh>

pgjones / ExtractTimeNhit.cc

Created September 28, 2012 10:02

Extract Nhit and time per event histogram from SNOMAN QSNO root files

	////////////////////////////////////////////////////////
	/// Extracts the Nhit histograms and Time histograms, into
	/// a SNOMAN independent version.
	///
	/// 06/12/10 - New File
	////////////////////////////////////////////////////////

	#include <TH1D.h>
	#include <TFile.h>
	#include <TTree.h>

pgjones / LoadRatDB.py

Created July 13, 2012 11:22

Load a ratdb file into a python dict using yaml and json_minify

	#!/usr/bin/env python
	# Author P G Jones - 13/07/2012 <[email protected]>
	# This script parses a ratdb file and loads the information into a python dict
	import yaml # Needs installing, not part of the standard python library
	import sys
	from minify_json import json_minify # Available from https://github.com/getify/JSON.minify

	def LoadRatDB( fileName ):
	""" Load a ratdb file and return a dictionary of the contents."""
	ratDBFile = open( fileName, "r" )

pgjones / PMTOpticsSNOMAN.mac

Created May 30, 2012 21:42

SNOMAN PMT rat commands

	/rat/db/set GEO[innerPMT] type "panelbuilder"
	/rat/db/set GEO[innerPMT] bucket_type "bSNOMAN"
	/rat/db/set GEO[innerPMT] concentrator_type "cSNOMAN"
	/rat/db/set GEO[innerPMT] pmt_type "s1408"
	/rat/db/set PMT[s1408] model_type "PMTOpticsSNOMAN"
	/rat/db/set PMT[s1408] model_params "PMTOpticsSNOMAN_salt"

pgjones / .emacs

Last active June 6, 2023 07:42

Good emacs init file, colours and no tabs

	(custom-set-variables
	;; custom-set-variables was added by Custom.
	;; If you edit it by hand, you could mess it up, so be careful.
	;; Your init file should contain only one such instance.
	;; If there is more than one, they won't work right.
	'(column-number-mode t)
	'(inhibit-startup-screen t)
	'(line-number-mode t)
	'(load-home-init-file t t)
	'(package-selected-packages (quote (terraform-mode))))

pgjones / Batch.sh

Created March 14, 2012 15:45

Useful batch script file

	#!/bin/bash
	CODEFOLDER=/home/jonesph/MCComparison/Electrons/RAT
	DATAFOLDER=/data/snoplus/jonesph/MCComparisonData
	TEMPFOLDER=$TMPDIR
	source /home/jonesph/snoplusenv

	file[1]=RAT5MeV

	cd $TEMPFOLDER

Phil Jones pgjones