Steve Pieper pieper

pieper / iodide-dcmjs-vtkjs

Created November 22, 2018 20:09

iodide example of dicom SEG plus vtkjs

	<!DOCTYPE html>
	<html>
	<head>
	<meta charset="UTF-8">
	<title>dcmjs-example - iodide</title>
	<link rel="stylesheet" type="text/css" href="https://iodide.io/stable/iodide.stable.css">
	</head>
	<body>
	<script id="jsmd" type="text/jsmd">
	%% meta

pieper / workflow.py

Created March 3, 2019 21:01

example workflow for robot control

	#
	# create classes defining the behavior of each step
	#
	class sInitial(ctk.ctkWorkflowWidgetStep, ) :
	"""Initial state of the MRRobot workflow"""

	def __init__(self, stepid, workflowWidget):
	self.initialize(stepid)
	self.workflowWidget = workflowWidget
	self.setName( 'Create or load a case' )

pieper / gist:c523bc988a05d98bdbcdad678a9af02d

Created April 11, 2019 01:13

things to install...

	et install libqt5webchannel5-dev
	63 rm -rm *
	64 rm -rf *
	65 ~/Support/cmake-3.13.4-Linux-x86_64/bin/cmake ../slicer/
	66 rm -rf *
	67 apt-file search Qt5WebEngineWidgetsConfig.cmake
	68 sudo apt-get install qtwebengine5-dev
	69 ~/Support/cmake-3.13.4-Linux-x86_64/bin/cmake ../slicer/
	70 rm -rf *
	71 apt-file search Qt5XmlPatternsConfig.cmake

pieper / Google VM launcher from OHIF

Created January 24, 2020 09:38

	<!DOCTYPE html>
	<html lang="en">
	<head>
	<meta charset="utf-8" />

	<meta
	name="description"
	content="Open Health Imaging Foundation DICOM Viewer"
	/>
	<meta

pieper / guide.py

Last active December 26, 2022 00:16

Slicer CPPYY example


	# Copyright Steve Pieper
	# https://github.com/Slicer/Slicer/blob/master/License.txt
	# Demo video: https://youtu.be/xcQKj4yp2nw

	"""

	exec(open('/Users/pieper/slicer/latest/SlicerTMSGuide/guide.py', 'r').read())

	"""

pieper / facehead.py

Created May 19, 2020 15:25

Slicer, open3d, azure kinect, MRHead

	"""

	pip_install("open3d")

	rename "/c/Program\ Files/Azure\ Kinect\ SDK\ v1.4.0/tools/k4a.dll" by changing 1.4 to 1.2

	path="c:/pieper/facenav/facenav.py"
	exec(open(path).read())

pieper / InstallSlicerModuleFromGit.py

Created June 27, 2020 16:37

	import os
	import shutil

	archiveFilePath = os.path.join(slicer.app.temporaryPath, "master.zip")
	outputDir = os.path.join(slicer.app.temporaryPath, "SlicerImageStacks")

	try:
	os.remove(archiveFilePath)
	except FileNotFoundError:
	pass

pieper / make.log

Created August 1, 2020 19:49

make package output on mac

	pieper@hive Slicer-build % time make package
	[ 0%] Built target ExtensionWizard-Resources
	[ 0%] Built target SlicerPythonResources
	[ 3%] Built target CopySlicerPythonScriptFiles
	[ 3%] Built target CompileSlicerPythonFiles
	[ 9%] Built target CopySlicerPythonResourceFiles
	[ 12%] Built target SlicerData
	[ 12%] Configuring vtkSlicerVersionConfigure.h
	-- Configuring Slicer release type [Experimental]
	-- Found Git: /usr/local/bin/git

pieper / vr-depthpeel-crop.py

Last active June 21, 2021 17:03

Example script related to this discussion: https://discourse.slicer.org/t/trying-to-diagnose-an-issue-with-virtualgl-and-slicer/17685/14

	#!/usr/bin/env python

	comment = """
	You can use this script with either Slicer's python wrapped VTK or with pip installed VTK like this:

	~/Downloads/Slicer-4.13.0-2021-06-18-linux-amd64/bin/PythonSlicer vr-depth-crop.py

	python vr-depth-crop.py

	"""

pieper / slicer-compute.py

Created May 21, 2022 20:57

Slicer with python WebGPU compute shader

	"""

	Install wgpu as described here: https://github.com/pygfx/wgpu-py

	Tested with Slicer 5.0.2 and wgpu 537c3eab68e9eef77681fc5545532380df26d8cc (basically 0.8.1)

	exec(open("./slicer-compute.py").read())

	"""