Patrick Kofod Mogensen pkofod
pkofod
/ gist:5e39d37a1d764bc2f8bc6648e6cdbb91
Created
September 3, 2019 10:53
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| julia> o_ode = fit(iv_ode,data,param,Pumas.FOCEI()) | |
| ERROR: MethodError: no method matching Float64(::ForwardDiff.Dual{ForwardDiff.Tag{getfield(Pumas, Symbol("##176#181")){Array{ForwardDiff.Dual{ForwardDiff.Tag{getfield(Pumas, Symbol("##175#180")){Float64,Base.Iterators.Pairs{Union{},Union{},Tuple{},NamedTuple{(),Tuple{}}},PumasModel{ParamSet{NamedTuple{(:tvcl, :tvv, :dur, :Ω, :σ_prop),Tuple{RealDomain{Float64},RealDomain{Float64},RealDomain{Float64},PDiagDomain{PDMats.PDiagMat{Float64,Array{Float64,1}}},RealDomain{Float64}}}},getfield(Main, Symbol("##53#58")),getfield(Main, Symbol("##54#59")),getfield(Main, Symbol("##55#60")),ODEProblem{Nothing,Tuple{Nothing,Nothing},false,Nothing,ODEFunction{false,getfield(ModelingToolkit, Symbol("#out_f_safe#66")){getfield(ModelingToolkit, Symbol("###396"))},UniformScaling{Bool},Nothing,Nothing,Nothing,Nothing,Nothing,Nothing,Nothing,Nothing,Nothing},Nothing,DiffEqBase.StandardODEProblem},getfield(Main, Symbol("##56#61")),getfield(Main, Symbol("##57#62"))},Subject{NamedTupl |
pkofod
/ gist:b3b35aef3810cca6ac9c7d8c33bfc59e
Created
March 28, 2020 14:25
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| julia> @code_warntype Pumas.vpc(pkres.model, pkres.data, coef(pkres), 1) | |
| Variables | |
| #self#::Core.Compiler.Const(Pumas.vpc, false) | |
| m::PumasModel{ParamSet{NamedTuple{(:tvcl, :tvv, :pmoncl, :Ω, :σ_prop),Tuple{RealDomain{Int64,TransformVariables.Infinity{true},Float64},RealDomain{Int64,TransformVariables.Infinity{true},Float64},RealDomain{Float64,TransformVariables.Infinity{true},Float64},PDiagDomain{PDMats.PDiagMat{Float64,Array{Float64,1}}},RealDomain{Int64,TransformVariables.Infinity{true},Float64}}}},var"#3#12",var"#4#13",var"#5#15",Central1,var"#6#16",var"#9#19"} | |
| population::Array{Subject{NamedTuple{(:dv,),Tuple{Array{Union{Missing, Float64},1}}},NamedTuple{(:isPM, :wt),Tuple{Int64,Int64}},Array{Pumas.Event{Float64,Float64,Float64,Float64,Float64,Float64,Int64},1},Array{Float64,1},Pumas.ConstantCovar{NamedTuple{(:isPM, :wt),Tuple{Int64,Int64}}},Float64},1} | |
| param::NamedTuple{(:tvcl, :tvv, :pmoncl, :Ω, :σ_prop),Tuple{Float64,Float64,Float64,PDMats.PDiagMat{Float64,Array{Float64,1}},Float64}} | |
| reps::Int |
pkofod
/ gist:a1daf55be5319e6ffd43c20bbe2ac01e
Created
August 10, 2020 14:14
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| _ | |
| _ _ _(_)_ | Documentation: https://docs.julialang.org | |
| (_) | (_) (_) | | |
| _ _ _| |_ __ _ | Type "?" for help, "]?" for Pkg help. | |
| | | | | | | |/ _` | | | |
| | | |_| | | | (_| | | Version 1.4.2 (2020-05-23) | |
| _/ |\__'_|_|_|\__'_| | Official https://julialang.org/ release | |
| |__/ | | |
| julia> using Random |
pkofod
/ gist:7a7918c30a2ccb75ebef787ac6466e7a
Created
August 10, 2020 14:17
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| _ | |
| _ _ _(_)_ | Documentation: https://docs.julialang.org | |
| (_) | (_) (_) | | |
| _ _ _| |_ __ _ | Type "?" for help, "]?" for Pkg help. | |
| | | | | | | |/ _` | | | |
| | | |_| | | | (_| | | Version 1.5.0 (2020-08-01) | |
| _/ |\__'_|_|_|\__'_| | Official https://julialang.org/ release | |
| |__/ | | |
| julia> using Random |
pkofod
/ gist:702c6a22cb29089a3b49e7a71af50d0b
Created
August 17, 2020 16:52
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| (@JuliaPro_v1.5.0-1) pkg> test Pumas | |
| Testing Pumas | |
| Status `C:\Users\patri\AppData\Local\Temp\jl_REwB9j\Project.toml` | |
| [0bf59076] AdvancedHMC v0.2.25 | |
| [336ed68f] CSV v0.7.7 | |
| [a93c6f00] DataFrames v0.21.6 | |
| [82cc6244] DataInterpolations v3.1.3 | |
| [864edb3b] DataStructures v0.17.20 | |
| [bcd4f6db] DelayDiffEq v5.24.1 |
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