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Dzmitry Plashchynski plashchynski

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plashchynski / merge_dna_files.rb
Last active October 29, 2024 03:33
Tool to merge 23andme and Ancestory.com raw dna files
#!/usr/bin/ruby
#
# Usage:
# ruby ./merge_dna_files.rb file,file1,file2... > merged_file.txt
#
# Example:
# ruby ./merge_dna_files.rb AncestryDNA.txt genome_John_Doe_v4_Full_20170428065226.txt > merged_raw.txt
#
# Supports 23andMe, AncestryDNA, and Genes for Good 23andMe compatible file formats.
# The result will be in 23andMe file format.
@plashchynski
plashchynski / genes_for_good_snps.csv
Created July 14, 2017 13:35
List of SNPs from Genes for Good free DNA tests https://medium.com/genomics/dna-tests-for-free-175af5f3412e
We can't make this file beautiful and searchable because it's too large.
rs3094315
rs3131972
rs75333668
rs11240777
rs4970383
rs4475691
rs200686669
rs13302982
rs201186828
rs148711625
@plashchynski
plashchynski / gist:e405f388ee2e1222e10b73467ce5b69c
Created March 22, 2017 12:20
pubkey
ssh-rsa AAAAB3NzaC1yc2EAAAADAQABAAABAQDHw2ONqkDChoKfisxtvgQ1x4haN1d01HaRHdJQveKKngwErgdRaItSmoaS+7382pm9hpfHzFs5HAIObwmRMfeK0t59keoI+NdL3iq+CagCyPrw3DLOv7sn129wrspXDEVPfVhKjXsL2pSFYz7P1Gr6BQlij7U8RvUCCj5gpaWQWwKtfq5HtWQ0KiMLvP13Tdq6uBvyp5IQALp2+s1wlzgBFxV6nOTICN6g4/Bh3oCGxyFTr77Kjv6HJ0kmJo48tNUhClnJB1NilOsSdjCzajCdV6jvjM1XzXeeVzuK9m+UKdT7eImBxgkhFBS4NwjQ7dCfHXT4waFyeSYv+ZUSm/qx [email protected]
@plashchynski
plashchynski / settings.json
Last active March 4, 2017 13:19
VC Code User settings $HOME/Library/Application Support/Code/User/settings.json
{
"window.zoomLevel": 0,
"workbench.colorTheme": "Visual Studio Light",
"editor.tabSize": 2
}
@plashchynski
plashchynski / convert_GCS_backup_to_CSV.py
Created June 12, 2016 00:00
Convert google cloud store backup to CSV
import sys
import csv
import codecs
sys.path.append('/usr/local/google_appengine')
from google.appengine.api.files import records
from google.appengine.datastore import entity_pb
from google.appengine.api import datastore
encoder = codecs.getincrementalencoder("utf-8")()
@plashchynski
plashchynski / keybase.md
Created April 11, 2015 16:49

Keybase proof

I hereby claim:

  • I am plashchynski on github.
  • I am plashchynski (https://keybase.io/plashchynski) on keybase.
  • I have a public key whose fingerprint is 4419 EECA 7D19 B3B0 28C9 909E CB2C 2D65 75A8 B69F

To claim this, I am signing this object:

@plashchynski
plashchynski / google_play_purchase_verification.rb
Last active August 29, 2015 14:16
Android Google Play In-App purchases verification in Ruby
module Android
def self.verify_purchase(receipt_data, signature)
android_inapp_public_key = Rails.application.secrets[:android_inapp_public_key]
public_key = OpenSSL::PKey::RSA.new(Base64.decode64(android_inapp_public_key))
unless public_key.verify(OpenSSL::Digest::SHA1.new, Base64.decode64(signature), receipt_data)
raise "Wrong Android payment"
end
end
end
@plashchynski
plashchynski / rust_compilation_on_mountain_lion.txt
Created February 22, 2015 02:10
Rust make check error on Mountain Lion
This file has been truncated, but you can view the full file.
Started by upstream project "Homebrew Pull Requests" build number 21724
originally caused by:
GitHub pull request #37038 of commit 112853edbd74f026142fbfc70f5e1b1cf4a08186 automatically merged.
[EnvInject] - Loading node environment variables.
Building remotely on mountain_lion in workspace /Users/brew/Jenkins/workspace/Homebrew Pull Requests/version/mountain_lion
> /Applications/Xcode.app/Contents/Developer/usr/bin/git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> /Applications/Xcode.app/Contents/Developer/usr/bin/git config remote.origin.url https://github.com/Homebrew/homebrew.git # timeout=10
Fetching upstream changes from https://github.com/Homebrew/homebrew.git
@plashchynski
plashchynski / rust_compilation_on_mavericks.txt
Created February 22, 2015 02:08
Rust make check error on Mavericks
This file has been truncated, but you can view the full file.
Started by upstream project "Homebrew Pull Requests" build number 21724
originally caused by:
GitHub pull request #37038 of commit 112853edbd74f026142fbfc70f5e1b1cf4a08186 automatically merged.
[EnvInject] - Loading node environment variables.
Building remotely on mavericks in workspace /Users/brew/Jenkins/workspace/Homebrew Pull Requests/version/mavericks
> /Applications/Xcode.app/Contents/Developer/usr/bin/git rev-parse --is-inside-work-tree # timeout=10
Fetching changes from the remote Git repository
> /Applications/Xcode.app/Contents/Developer/usr/bin/git config remote.origin.url https://github.com/Homebrew/homebrew.git # timeout=10
Fetching upstream changes from https://github.com/Homebrew/homebrew.git
> /Applications/Xcode.app/Contents/Developer/usr/bin/git --version # timeout=10
@plashchynski
plashchynski / sublime.cfg
Last active August 29, 2015 14:05
sublime user config
{
"color_scheme": "Packages/Color Scheme - Default/Mac Classic.tmTheme",
"font_face": "Menlo-Regular",
"font_size": 14.0,
"ignored_packages":
[
"Vintage"
],
"tab_size": 2,
"translate_tabs_to_spaces": true