prem0862
/ create_client_response
Created
February 25, 2018 13:00
This is the Request Payload code i am getting while interrupting the request using developer tools
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| { | |
| "activationDate":"25 Feb 2018", | |
| "active":true, | |
| "address":[ | |
| ], | |
| "clientClassificationId":219, | |
| "clientTypeId":213, | |
| "datatables":[ | |
| { |
prem0862
/ SBOLDesigner_Error
Created
April 20, 2018 22:44
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| [INFO] Scanning for projects... | |
| [WARNING] | |
| [WARNING] Some problems were encountered while building the effective model for edu.utah.ece.async.sboldesigner:SBOLDesigner:jar:3.0-SNAPSHOT | |
| [WARNING] 'build.plugins.plugin.version' for org.apache.maven.plugins:maven-jar-plugin is missing. @ line 67, column 12 | |
| [WARNING] | |
| [WARNING] It is highly recommended to fix these problems because they threaten the stability of your build. | |
| [WARNING] | |
| [WARNING] For this reason, future Maven versions might no longer support building such malformed projects. | |
| [WARNING] | |
| [WARNING] The POM for org.eclipse.m2e:lifecycle-mapping:jar:1.0.0 is missing, no dependency information available |
prem0862
/ SBOLDesigner_Error_
Created
April 24, 2018 18:33
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| [INFO] ------------------------------------------------------------------------ | |
| [INFO] BUILD FAILURE | |
| [INFO] ------------------------------------------------------------------------ | |
| [INFO] Total time: 1.965 s | |
| [INFO] Finished at: 2018-04-24T23:57:47+05:30 | |
| [INFO] Final Memory: 14M/155M | |
| [INFO] ------------------------------------------------------------------------ | |
| [ERROR] Failed to execute goal org.codehaus.mojo:exec-maven-plugin:1.6.0:java (default-cli) on project SBOLDesigner: An exception occured while executing the Java class. com.clarkparsia.sbol.editor.SBOLDesignerStandalone -> [Help 1] | |
| org.apache.maven.lifecycle.LifecycleExecutionException: Failed to execute goal org.codehaus.mojo:exec-maven-plugin:1.6.0:java (default-cli) on project SBOLDesigner: An exception occured while executing the Java class. com.clarkparsia.sbol.editor.SBOLDesignerStandalone | |
| at org.apache.maven.lifecycle.internal.MojoExecutor.execute(MojoExecutor.java:212) |
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| public class LoginFrame { | |
| public static void main(String []args) { | |
| JFrame frame = new JFrame("Login"); | |
| frame.setSize(300, 150); | |
| frame.setDefaultCloseOperation(JFrame.EXIT_ON_CLOSE); | |
| placeComponents(frame); | |
| frame.setVisible(true); | |
| } |
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| public final SBOLEditorAction BOOST = new SBOLEditorAction("BOOST", "Prepare for Synthesis with BOOST", | |
| "upload.png") { | |
| @Override | |
| protected void perform() { | |
| // TODO Prem fill in code here | |
| // create document | |
| // call boost dialog and pass in document | |
| // print response document for now (or write to disk, etc) | |
| try { |
prem0862
/ SBOL-Error
Created
June 3, 2018 13:27
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| Exception in thread "AWT-EventQueue-0" java.lang.NoSuchFieldError: CIRCULAR | |
| at edu.utah.ece.async.sboldesigner.sbol.editor.SBOLDesign.updateCanvasCD(SBOLDesign.java:1554) | |
| at edu.utah.ece.async.sboldesigner.sbol.editor.SBOLDesign.createDocument(SBOLDesign.java:1522) | |
| at edu.utah.ece.async.sboldesigner.sbol.editor.SBOLDesign.expandCombinatorial(SBOLDesign.java:1399) | |
| at edu.utah.ece.async.sboldesigner.sbol.editor.SBOLDesign.access$3(SBOLDesign.java:1397) | |
| at edu.utah.ece.async.sboldesigner.sbol.editor.SBOLDesign$6.perform(SBOLDesign.java:273) | |
| at edu.utah.ece.async.sboldesigner.sbol.editor.SBOLEditorAction.actionPerformed(SBOLEditorAction.java:91) | |
| at javax.swing.AbstractButton.fireActionPerformed(Unknown Source) | |
| at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source) | |
| at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source) |
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| {"job":{"job-time-finished":"06/12/2018 01:23:10 PM","job-time-created":"06/12/2018 01:23:10 PM","job-uuid":"f76a2af3-fc55-4260-b499-e965fc25cfec","job-report":{"response":[{"exception":[],"modified-sequences-file":"e1ee6ddf-cdd7-4135-a462-7c5750425ac7_JUG.sbol","original-sequences-file":"e1ee6ddf-cdd7-4135-a462-7c5750425ac7","original-sequences-text":"<?xml version=\"1.0\" ?>\r\n<rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:sbol=\"http://sbols.org/v2#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:prov=\"http://www.w3.org/ns/prov#\">\r\n <sbol:ComponentDefinition rdf:about=\"http://www.async.ece.utah.edu/BBa_C0062\">\r\n <sbol:persistentIdentity rdf:resource=\"http://www.async.ece.utah.edu/BBa_C0062\"/>\r\n <sbol:displayId>BBa_C0062<\/sbol:displayId>\r\n <prov:wasDerivedFrom rdf:resource=\"http://partsregistry.org/Part:BBa_C0062\"/>\r\n <dcterms:title>luxR<\/dcterms:title>\r\n <sbol:type rdf:resource=\"http://www.biopax.org/release/biopax-level3.owl#DnaRegion\" |
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| { | |
| "job": { | |
| "job-time-finished": "06/12/2018 01:23:10 PM", | |
| "job-time-created": "06/12/2018 01:23:10 PM", | |
| "job-uuid": "f76a2af3-fc55-4260-b499-e965fc25cfec", | |
| "job-report": { | |
| "response": [{ | |
| "exception": [], | |
| "modified-sequences-file": "e1ee6ddf-cdd7-4135-a462-7c5750425ac7_JUG.sbol", | |
| "original-sequences-file": "e1ee6ddf-cdd7-4135-a462-7c5750425ac7", |
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| { | |
| "response": [{ | |
| "exception": [], | |
| "modified-sequences-file": "e676dff4-706d-4020-96ba-60315dc59c41_JUG.sbol", | |
| "original-sequences-file": "e676dff4-706d-4020-96ba-60315dc59c41", | |
| "original-sequences-text": "<?xml version=\"1.0\" ?>\r\n<rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\" xmlns:sbol=\"http://sbols.org/v2#\" xmlns:dcterms=\"http://purl.org/dc/terms/\" xmlns:prov=\"http://www.w3.org/ns/prov#\">\r\n <sbol:ComponentDefinition rdf:about=\"http://www.async.ece.utah.edu/BBa_C0062\">\r\n <sbol:persistentIdentity rdf:resource=\"http://www.async.ece.utah.edu/BBa_C0062\"/>\r\n <sbol:displayId>BBa_C0062<\/sbol:displayId>\r\n <prov:wasDerivedFrom rdf:resource=\"http://partsregistry.org/Part:BBa_C0062\"/>\r\n <dcterms:title>luxR<\/dcterms:title>\r\n <sbol:type rdf:resource=\"http://www.biopax.org/release/biopax-level3.owl#DnaRegion\"/>\r\n <sbol:type rdf:resource=\"http://identifiers.org/so/SO:0000987\"/>\r\n <sbol:role rdf:resource=\"http://identifiers.org/so/SO:00 |
prem0862
/ JSON Request example
Created
June 22, 2018 11:38
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| { | |
| "output": { | |
| "format": "SBOL" | |
| }, | |
| "job": { | |
| "job-BOOST-function": "CODON_JUGGLE" | |
| }, | |
| "sequences": { | |
| "auto-annotate": true, | |
| "text": "<?xml version=\"1.0\" ?>\r\n<rdf:RDF xmlns:rdf=\"http://www.w3.org/1999/02/22-rdf-syntax-ns#\"\r\n xmlns:sbol=\"http://sbols.org/v2#\"\r\n xmlns:dcterms=\"http://purl.org/dc/terms/\"\r\n xmlns:prov=\"http://www.w3.org/ns/prov#\">\r\n <sbol:ComponentDefinition rdf:about=\"http://www.async.ece.utah.edu/BBa_C0062\">\r\n <sbol:persistentIdentity rdf:resource=\"http://www.async.ece.utah.edu/BBa_C0062\"/>\r\n <sbol:displayId>BBa_C0062<\/sbol:displayId>\r\n <prov:wasDerivedFrom rdf:resource=\"http://partsregistry.org/Part:BBa_C0062\"/>\r\n <dcterms:title>luxR<\/dcterms:title>\r\n <sbol:type rdf:resource=\"http://www.biopax.org/release/biopax-level3.owl#DnaRegion\"/>\r\n <sbol:type rdf:resource=\"http://identifiers.org/so/SO:0000987\"/>\r\n <sbol:role rdf:resource=\"http://identifiers.org/so/SO:0000316\"/>\r\n <\/sbol:ComponentDef |
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