This file has been truncated, but you can view the full file.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| @HD VN:1.4 SO:coordinate | |
| @SQ SN:chrPhage LN:48502 | |
| @RG ID:testPE1.L1 PU:unit1 LB:lib1 SM:testPE1 PL:Illumina | |
| @PG ID:bwa PN:bwa VN:0.7.15-r1140 CL:bwa mem -t 1 -R @RG\tID:testPE1.L1\tPU:unit1\tLB:lib1\tSM:testPE1\tPL:Illumina ./data/lambda_virus.fa /data2/junwenwang/panwen/tools/bioprocs/tests/workdir/PyPPL.pFastqPE2SamData.sambam.20pe9DUu/1/input/testPE1_1.fq /data2/junwenwang/panwen/tools/bioprocs/tests/workdir/PyPPL.pFastqPE2SamData.sambam.20pe9DUu/1/input/testPE1_2.fq | |
| @PG ID:bamsort PN:bamsort CL:bamsort I=/data2/junwenwang/panwen/tools/bioprocs/tests/workdir/PyPPL.pSam2BamData.sambam.hl9sPcM2/1/input/testPE1.sam O=/data2/junwenwang/panwen/tools/bioprocs/tests/workdir/PyPPL.pSam2BamData.sambam.hl9sPcM2/1/output/testPE1.bam SO=coordinate blockme=16384 tmpfile=/tmp/pSam2BamData.testPE1.1/tmp. inputformat=sam outformat=bam inputthreads=1 outputthreads=1 markduplicates=0 rmdup=0 PP:bwa VN:2.0.72 | |
| r92 2145 chrPhage 1 60 273H42M = 43 244 GGGCGGCGACCTCGCGGGTTTTCGCTATTTATGAAAATTTTC A5)?.3E8,=E*1F4/"F50>9/#H'=A:/$G9) |
NewerOlder