sahilseth

## a vector of full paths to fastq files (mate 1)
fqs1 = rep("myfile.fastq", 20)
## a vector of full paths to fastq files (mate 2)
fqs2 = rep("myfile.fastq", 20)
## full path to bwa
bwa_exe = ""
bwa_aln_opts = ""
bwa_sampe_opts = ""

sahilseth

#!/bin/sh
#----------------------------------------------------------------
# Daily Backup Routine - Backup and Sync to Dropbox
# This script creates a backup using today's date, then deleted
# any backups made 3 days ago. If run every day it will ensure
# you have a week's worth of backups of your MySQL databases and
# zPanel web directories. 
#
# Uses whatever Dropbox account is running on the server.
#

sahilseth

## ------ download this file:
## wget https://gist.githubusercontent.com/sahilseth/01d5e88e431334fcd527/raw -O cloud_formation.sh
## bash cloud_formation.sh

## run this file
## chmod u+x cloud_formation.sh

## Assuming you are running this as ubuntu user

### --------- Install from apt-get