samehkamaleldin

from collections import Counter
from typing import Dict


def main():
    # ----------------- Configuration ----------------- #
    fasta_filepath = "./data/Hsym_primary_v1.0.aa.fasta"
    window_size = 16
    slide_size = 4
    aa_min_occurrences = {'R': 5, 'G': 3}

samehkamaleldin

# : << 'EOF'
# https://github.com/gpakosz/.tmux
# (‑●‑●)> dual licensed under the WTFPL v2 license and the MIT license,
#         without any warranty.
#         Copyright 2012— Gregory Pakosz (@gpakosz).
#
# ------------------------------------------------------------------------------
# /!\ DO NOT EDIT THIS FILE
#     instead, override your .local customization file copy, see README.md   /!\
# ------------------------------------------------------------------------------

samehkamaleldin

version = 2
console_title_template = '{{ .Shell }} in {{ .PWD }}'
shell_integration = true

[[blocks]]
  type = 'prompt'
  alignment = 'left'
  newline = true

  [[blocks.segments]]

samehkamaleldin

import xml.etree.ElementTree as ET
import re
from pathlib import Path
from typing import Dict, List, Any, Optional
from dataclasses import dataclass, field
import logging
import pandas as pd
from datetime import datetime

# Set up logging

samehkamaleldin

#!/usr/bin/env python3

import argparse
import re
import shutil
from pathlib import Path
from typing import Dict, List, Set

DATA_DIRPATH = r"PATH_TO_YOUR_DATA_DIRECTORY"  # Replace with your actual data directory path

samehkamaleldin

import xml.etree.ElementTree as ET
import re
from pathlib import Path
from typing import Dict, List, Any, Optional
from dataclasses import dataclass, field
import logging
import pandas as pd
from datetime import datetime

# Set up logging