sammlapp / notes_trial.md

Last active November 23, 2019 13:27

this is markdown!

when we put a link it just works...

we can take notes with lists

this list
this other list

and secondary headers

a
b

sammlapp / PyTorch Model Training.md

Last active June 8, 2020 16:42

Installing and setting up Pytorch

Procedure for setting up PyTorch for training and predicting with Inception CNN models. We were previously using Tensorflow + Keras, but are transitioning to PyTorch.

crc has instructions for python environment on cluster. Basically, we set up a new virtual environment on the cluster like this:

module purge

sammlapp / curtis_craig_audio_notes.md

Last active February 24, 2020 15:25

Notes from meeting with Curtis Craig on recorder testing 2/21/2020

Meeting with Curtis Craig on 2/21/2020

We chatted about approaches to microphone testing, recording impulse responses, simulating distant sound, and other topics. I need to email Curtis as a follow-up (get in touch with SMAART team, ask about crazy localizing mics, etc)

Localization

People are developing crazy microphones with many nodes for directionality (1000?).

Impulse Response measurement

People traditionally pop a balloon. In a large outdoor space, need a starter pistol to activate the space acoustically. But, since birds are not that loud a baloon is probably fine. Once, Curtis used a yacht cannon in a stadium.

sammlapp / opensoundscape_git_workflow.md

Last active December 15, 2020 22:21

Notes on git workflow for opensoundscape

Cloning a repository and setting up virtualenv

things formatted like this are terminal commands

0. If you don't have virtualenv and poetry, install them:

Check if you have poetry:

which poetry

If nothing is printed, you don't have it.

sammlapp / rook_globus.md

Last active April 21, 2020 18:24

setting up globus on Rook to transfer files

Start Globus container on Rook

Log in to the Rook gui
navigate to Start (Apps) > Docker > Container
Switch on container called 'Barrymoo-gcp_client1'
Double click on container called 'Barrymoo-gcp_client1'
Go to Terminal tab

In that terminal (we'll call this the "Rook GUI terminal")

type Return

sammlapp / bridges.md

Last active January 19, 2021 21:35

Using Bridges 2

NOTE: These instructions have migrated to Kitzes lab lab docs

Help

docs

help@psc.edu

Loging in

sammlapp / swallow_setup.md

Last active April 28, 2026 15:32

Setting up a Raspberry Pi 4.0 to use as a Swallow

These instructions are a work in progress

Operating system

flash SD card with raspberry pi OS using Raspberry PI Imager application.

Choose the latest 64 Bit Raspberry Pi OS and select the attached SD card as the drive

use the set-up features in the application to:
set the country/location

sammlapp / machine_learning_hot_takes.md

Created December 16, 2021 20:17

Machine Learning: Hot Takes

Multi-target vs Single-Target models

aka Multi-label vs Single-label

Multi-target = "checkboxes": each option (class) can be chosen or not, independently of the others Single-target model = "radio buttons": choose one and only one of the options (classes)

sammlapp / rpi_synth.md

Last active February 20, 2023 00:24

set up raspberry pi

use Raspberry Pi imager on mac to install Raspberry Pi OS on a microSD card

use the advanced setup option to pre-configure ssh access and wifi

remote access to the GUI:

From mac terminal:

ssh into pi (ssh pi@username.local, then enter password)
install tightvnc: sudo apt update (this might take a while) then sudo apt install tightvncserver
start the VNC server (will need to be restarted on each reboot, but you only specify the password the first time): vncserver then enter a password (password has 8 character limit)

sammlapp / model_sharing_guidelines.md

Last active February 6, 2023 16:57

Sharing models trained in OpenSoundscape

Recommended steps for publicly sharing a model trained with OpenSoundscape

Uploading the saved model object to a public location such as Box, OneDrive, etc
- Save the model object in two different ways to improve usability:
(1) model.save() in OpenSoundscape to save the entire model object, which can be re-loaded only in the same version as OpenSoundscape

(2) To enable use with other OpenSoundscape versions, save the weights dictionary and additional model information as a dictionary with torch.save. For instance:

Sam Lapp sammlapp