sammlapp / notes_trial.md

Last active November 23, 2019 13:27

this is markdown!

when we put a link it just works...

we can take notes with lists

this list
this other list

and secondary headers

a
b

sammlapp / PyTorch Model Training.md

Last active June 8, 2020 16:42

Installing and setting up Pytorch

Procedure for setting up PyTorch for training and predicting with Inception CNN models. We were previously using Tensorflow + Keras, but are transitioning to PyTorch.

crc has instructions for python environment on cluster. Basically, we set up a new virtual environment on the cluster like this:

module purge

sammlapp / curtis_craig_audio_notes.md

Last active February 24, 2020 15:25

Notes from meeting with Curtis Craig on recorder testing 2/21/2020

Meeting with Curtis Craig on 2/21/2020

We chatted about approaches to microphone testing, recording impulse responses, simulating distant sound, and other topics. I need to email Curtis as a follow-up (get in touch with SMAART team, ask about crazy localizing mics, etc)

Localization

People are developing crazy microphones with many nodes for directionality (1000?).

Impulse Response measurement

People traditionally pop a balloon. In a large outdoor space, need a starter pistol to activate the space acoustically. But, since birds are not that loud a baloon is probably fine. Once, Curtis used a yacht cannon in a stadium.

sammlapp / opensoundscape_git_workflow.md

Last active December 15, 2020 22:21

Notes on git workflow for opensoundscape

Cloning a repository and setting up virtualenv

things formatted like this are terminal commands

0. If you don't have virtualenv and poetry, install them:

Check if you have poetry:

which poetry

If nothing is printed, you don't have it.

sammlapp / rook_globus.md

Last active April 21, 2020 18:24

setting up globus on Rook to transfer files

Start Globus container on Rook

Log in to the Rook gui
navigate to Start (Apps) > Docker > Container
Switch on container called 'Barrymoo-gcp_client1'
Double click on container called 'Barrymoo-gcp_client1'
Go to Terminal tab

In that terminal (we'll call this the "Rook GUI terminal")

type Return

sammlapp / bridges.md

Last active January 19, 2021 21:35

Using Bridges 2

NOTE: These instructions have migrated to Kitzes lab lab docs

Help

docs

[email protected]

Loging in

sammlapp / swallow_setup.md

Last active October 24, 2024 20:29

Setting up a Raspberry Pi 4.0 to use as a Swallow

These instructions are a work in progress

Operating system

flash SD card with raspberry pi OS using Raspberry PI Imager application
can now use the set-up features to:
- set the host-name (swallow-016, eg)
- enter wifi credentials for a local wifi network.
- enable SSH
set username ("pi" is good) and password (ask a lab member)

sammlapp / machine_learning_hot_takes.md

Created December 16, 2021 20:17

Machine Learning: Hot Takes

Multi-target vs Single-Target models

aka Multi-label vs Single-label

Multi-target = "checkboxes": each option (class) can be chosen or not, independently of the others Single-target model = "radio buttons": choose one and only one of the options (classes)

sammlapp / rpi_synth.md

Last active February 20, 2023 00:24

set up raspberry pi

use Raspberry Pi imager on mac to install Raspberry Pi OS on a microSD card

use the advanced setup option to pre-configure ssh access and wifi

remote access to the GUI:

From mac terminal:

ssh into pi (ssh [email protected], then enter password)
install tightvnc: sudo apt update (this might take a while) then sudo apt install tightvncserver
start the VNC server (will need to be restarted on each reboot, but you only specify the password the first time): vncserver then enter a password (password has 8 character limit)

sammlapp / model_sharing_guidelines.md

Last active February 6, 2023 16:57

Sharing models trained in OpenSoundscape

Recommended steps for publicly sharing a model trained with OpenSoundscape

Uploading the saved model object to a public location such as Box, OneDrive, etc
- Save the model object in two different ways to improve usability:
(1) model.save() in OpenSoundscape to save the entire model object, which can be re-loaded only in the same version as OpenSoundscape

(2) To enable use with other OpenSoundscape versions, save the weights dictionary and additional model information as a dictionary with torch.save. For instance:

Sam Lapp sammlapp