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sebastien-bratieres/package test - parakeet.ipynb

Created November 27, 2013 23:10
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package test - parakeet.ipynb
{
"metadata": {
"name": ""
},
"nbformat": 3,
"nbformat_minor": 0,
"worksheets": [
{
"cells": [
{
"cell_type": "code",
"collapsed": false,
"input": [
"from parakeet import jit\n",
"\n",
"@jit \n",
"def allpairs_dist(X,Y):\n",
" \"\"\"\n",
" Compute all pairs distances between rows of X and Y\n",
" For two 1000x1000 float64 inputs (on a 2.67ghz Xeon): \n",
" - Python runtime: 11.5 seconds\n",
" - Parakeet runtime: .013 seconds \n",
" \"\"\"\n",
" def dist(x,y):\n",
" return np.sum( (x-y)**2 )\n",
" return np.array([[dist(x,y) for y in Y] for x in X])\n",
"%timeit allpairs_dist(np.arange((1000)), np.arange((1000)))"
],
"language": "python",
"metadata": {},
"outputs": [
{
"output_type": "stream",
"stream": "stdout",
"text": [
"/usr/bin/gcc -I/home/sb358/anaconda/include/python2.7 -I/home/sb358/anaconda/lib/python2.7/site-packages/numpy/core/include -fPIC -O2 -msse2 -ffast-math -c /tmp/parakeet_allpairs_dist_ULjpH0.c -o /tmp/parakeet_allpairs_dist_ULjpH0.o\n",
"/usr/bin/gcc /tmp/parakeet_allpairs_dist_ULjpH0.o -shared -lm -o /tmp/parakeet_allpairs_dist_ULjpH0.so"
]
},
{
"output_type": "stream",
"stream": "stdout",
"text": [
"\n",
"Loading newly compiled extension module /tmp/parakeet_allpairs_dist_ULjpH0.so...\n",
"1 loops, best of 3: 4.73 ms per loop\n"
]
}
],
"prompt_number": 9
},
{
"cell_type": "code",
"collapsed": false,
"input": [
"import parakeet\n",
"\n",
"#parakeet.config.backend = 'c'\n",
"parakeet.c_backend.config.print_commands = True\n",
"\n",
"from parakeet import jit\n",
"import numpy as np\n",
"a = np.linspace(0,1,20000)\n",
"\n",
"@parakeet.jit \n",
"def lse_parakeet(a):\n",
" result = 0.0\n",
" largest_in_a = 0.0\n",
" for i in range(a.shape[0]):\n",
" if (a[i] > largest_in_a):\n",
" largest_in_a = a[i]\n",
" for i in range(a.shape[0]):\n",
" result += np.exp(a[i] - largest_in_a)\n",
" return np.log(result) + largest_in_a\n",
"\n",
"%timeit lse_parakeet(a)"
],
"language": "python",
"metadata": {},
"outputs": [
{
"output_type": "stream",
"stream": "stdout",
"text": [
"/usr/bin/gcc -I/home/sb358/anaconda/include/python2.7 -I/home/sb358/anaconda/lib/python2.7/site-packages/numpy/core/include -fPIC -O2 -msse2 -ffast-math -c /tmp/parakeet_lse_parakeet_q4ezKG.c -o /tmp/parakeet_lse_parakeet_q4ezKG.o\n",
"/usr/bin/gcc /tmp/parakeet_lse_parakeet_q4ezKG.o -shared -lm -o /tmp/parakeet_lse_parakeet_q4ezKG.so"
]
},
{
"ename": "ImportError",
"evalue": "/homes/mlghomes/sb358/anaconda/bin/../lib/libm.so.6: version `GLIBC_2.15' not found (required by /tmp/parakeet_lse_parakeet_q4ezKG.so)",
"output_type": "pyerr",
"traceback": [
"\u001b[1;31m---------------------------------------------------------------------------\u001b[0m\n\u001b[1;31mImportError\u001b[0m Traceback (most recent call last)",
"\u001b[1;32m<ipython-input-8-f205d36e7ecb>\u001b[0m in \u001b[0;36m<module>\u001b[1;34m()\u001b[0m\n\u001b[0;32m 19\u001b[0m \u001b[1;32mreturn\u001b[0m \u001b[0mnp\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mlog\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mresult\u001b[0m\u001b[1;33m)\u001b[0m \u001b[1;33m+\u001b[0m \u001b[0mlargest_in_a\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 20\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m---> 21\u001b[1;33m \u001b[0mget_ipython\u001b[0m\u001b[1;33m(\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mmagic\u001b[0m\u001b[1;33m(\u001b[0m\u001b[1;34mu'timeit lse_parakeet(a)'\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/IPython/core/interactiveshell.pyc\u001b[0m in \u001b[0;36mmagic\u001b[1;34m(self, arg_s)\u001b[0m\n\u001b[0;32m 2170\u001b[0m \u001b[0mmagic_name\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0m_\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mmagic_arg_s\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0marg_s\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mpartition\u001b[0m\u001b[1;33m(\u001b[0m\u001b[1;34m' '\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 2171\u001b[0m \u001b[0mmagic_name\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mmagic_name\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mlstrip\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mprefilter\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mESC_MAGIC\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m-> 2172\u001b[1;33m \u001b[1;32mreturn\u001b[0m \u001b[0mself\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mrun_line_magic\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mmagic_name\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mmagic_arg_s\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 2173\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 2174\u001b[0m \u001b[1;31m#-------------------------------------------------------------------------\u001b[0m\u001b[1;33m\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/IPython/core/interactiveshell.pyc\u001b[0m in \u001b[0;36mrun_line_magic\u001b[1;34m(self, magic_name, line)\u001b[0m\n\u001b[0;32m 2091\u001b[0m \u001b[0mkwargs\u001b[0m\u001b[1;33m[\u001b[0m\u001b[1;34m'local_ns'\u001b[0m\u001b[1;33m]\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0msys\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0m_getframe\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mstack_depth\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mf_locals\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 2092\u001b[0m \u001b[1;32mwith\u001b[0m \u001b[0mself\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mbuiltin_trap\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m-> 2093\u001b[1;33m \u001b[0mresult\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mfn\u001b[0m\u001b[1;33m(\u001b[0m\u001b[1;33m*\u001b[0m\u001b[0margs\u001b[0m\u001b[1;33m,\u001b[0m\u001b[1;33m**\u001b[0m\u001b[0mkwargs\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 2094\u001b[0m \u001b[1;32mreturn\u001b[0m \u001b[0mresult\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 2095\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/IPython/core/magics/execution.pyc\u001b[0m in \u001b[0;36mtimeit\u001b[1;34m(self, line, cell)\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/IPython/core/magic.pyc\u001b[0m in \u001b[0;36m<lambda>\u001b[1;34m(f, *a, **k)\u001b[0m\n\u001b[0;32m 189\u001b[0m \u001b[1;31m# but it's overkill for just that one bit of state.\u001b[0m\u001b[1;33m\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 190\u001b[0m \u001b[1;32mdef\u001b[0m \u001b[0mmagic_deco\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0marg\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m--> 191\u001b[1;33m \u001b[0mcall\u001b[0m \u001b[1;33m=\u001b[0m \u001b[1;32mlambda\u001b[0m \u001b[0mf\u001b[0m\u001b[1;33m,\u001b[0m \u001b[1;33m*\u001b[0m\u001b[0ma\u001b[0m\u001b[1;33m,\u001b[0m \u001b[1;33m**\u001b[0m\u001b[0mk\u001b[0m\u001b[1;33m:\u001b[0m \u001b[0mf\u001b[0m\u001b[1;33m(\u001b[0m\u001b[1;33m*\u001b[0m\u001b[0ma\u001b[0m\u001b[1;33m,\u001b[0m \u001b[1;33m**\u001b[0m\u001b[0mk\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 192\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 193\u001b[0m \u001b[1;32mif\u001b[0m \u001b[0mcallable\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0marg\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/IPython/core/magics/execution.pyc\u001b[0m in \u001b[0;36mtimeit\u001b[1;34m(self, line, cell)\u001b[0m\n\u001b[0;32m 929\u001b[0m \u001b[0mnumber\u001b[0m \u001b[1;33m=\u001b[0m \u001b[1;36m1\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 930\u001b[0m \u001b[1;32mfor\u001b[0m \u001b[0mi\u001b[0m \u001b[1;32min\u001b[0m \u001b[0mrange\u001b[0m\u001b[1;33m(\u001b[0m\u001b[1;36m1\u001b[0m\u001b[1;33m,\u001b[0m \u001b[1;36m10\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m--> 931\u001b[1;33m \u001b[1;32mif\u001b[0m \u001b[0mtimer\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mtimeit\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mnumber\u001b[0m\u001b[1;33m)\u001b[0m \u001b[1;33m>=\u001b[0m \u001b[1;36m0.2\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 932\u001b[0m \u001b[1;32mbreak\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 933\u001b[0m \u001b[0mnumber\u001b[0m \u001b[1;33m*=\u001b[0m \u001b[1;36m10\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/timeit.pyc\u001b[0m in \u001b[0;36mtimeit\u001b[1;34m(self, number)\u001b[0m\n\u001b[0;32m 193\u001b[0m \u001b[0mgc\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mdisable\u001b[0m\u001b[1;33m(\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 194\u001b[0m \u001b[1;32mtry\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m--> 195\u001b[1;33m \u001b[0mtiming\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mself\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0minner\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mit\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mself\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mtimer\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 196\u001b[0m \u001b[1;32mfinally\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 197\u001b[0m \u001b[1;32mif\u001b[0m \u001b[0mgcold\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m<magic-timeit>\u001b[0m in \u001b[0;36minner\u001b[1;34m(_it, _timer)\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/parakeet/frontend/decorators.pyc\u001b[0m in \u001b[0;36m__call__\u001b[1;34m(self, *args, **kwargs)\u001b[0m\n\u001b[0;32m 18\u001b[0m \u001b[1;32melse\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 19\u001b[0m \u001b[0mbackend_name\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mNone\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m---> 20\u001b[1;33m \u001b[1;32mreturn\u001b[0m \u001b[0mrun_python_fn\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mself\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mf\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0margs\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mkwargs\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mbackend\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mbackend_name\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 21\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 22\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/parakeet/frontend/run_function.pyc\u001b[0m in \u001b[0;36mrun_python_fn\u001b[1;34m(fn, args, kwargs, backend)\u001b[0m\n\u001b[0;32m 131\u001b[0m \u001b[1;31m# translate from the Python AST to Parakeet's untyped format\u001b[0m\u001b[1;33m\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 132\u001b[0m \u001b[0muntyped\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mast_conversion\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mtranslate_function_value\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m--> 133\u001b[1;33m \u001b[1;32mreturn\u001b[0m \u001b[0mrun_untyped_fn\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0muntyped\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0margs\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mkwargs\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mbackend\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 134\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/parakeet/frontend/run_function.pyc\u001b[0m in \u001b[0;36mrun_untyped_fn\u001b[1;34m(fn, args, kwargs, backend)\u001b[0m\n\u001b[0;32m 113\u001b[0m \u001b[0mkwargs\u001b[0m \u001b[1;33m=\u001b[0m \u001b[1;33m{\u001b[0m\u001b[1;33m}\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 114\u001b[0m \u001b[0mtyped_fn\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mlinear_args\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mspecialize\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0margs\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mkwargs\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m--> 115\u001b[1;33m \u001b[1;32mreturn\u001b[0m \u001b[0mrun_typed_fn\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mtyped_fn\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mlinear_args\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mbackend\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 116\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 117\u001b[0m def run_python_ast(fn_name, fn_args, fn_body, globals_dict, \n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/parakeet/frontend/run_function.pyc\u001b[0m in \u001b[0;36mrun_typed_fn\u001b[1;34m(fn, args, backend)\u001b[0m\n\u001b[0;32m 73\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 74\u001b[0m \u001b[1;32mif\u001b[0m \u001b[0mbackend\u001b[0m \u001b[1;33m==\u001b[0m \u001b[1;34m'c'\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m---> 75\u001b[1;33m \u001b[1;32mreturn\u001b[0m \u001b[0mc_backend\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mrun\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mfn\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0margs\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 76\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 77\u001b[0m \u001b[1;32melif\u001b[0m \u001b[0mbackend\u001b[0m \u001b[1;33m==\u001b[0m \u001b[1;34m'openmp'\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/parakeet/c_backend/run_function.pyc\u001b[0m in \u001b[0;36mrun\u001b[1;34m(fn, args)\u001b[0m\n\u001b[0;32m 20\u001b[0m \u001b[0mc_fn\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0m_cache\u001b[0m\u001b[1;33m[\u001b[0m\u001b[0mkey\u001b[0m\u001b[1;33m]\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 21\u001b[0m \u001b[1;32melse\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m---> 22\u001b[1;33m \u001b[0mcompiled_fn\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mPyModuleCompiler\u001b[0m\u001b[1;33m(\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mcompile_entry\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mtransformed_fn\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 23\u001b[0m \u001b[0mc_fn\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mcompiled_fn\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mc_fn\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 24\u001b[0m \u001b[0m_cache\u001b[0m\u001b[1;33m[\u001b[0m\u001b[0mkey\u001b[0m\u001b[1;33m]\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mc_fn\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/parakeet/c_backend/pymodule_compiler.pyc\u001b[0m in \u001b[0;36mcompile_entry\u001b[1;34m(self, parakeet_fn)\u001b[0m\n\u001b[0;32m 769\u001b[0m \u001b[0mcompiler\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mself\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mcompiler_cmd\u001b[0m\u001b[1;33m,\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 770\u001b[0m \u001b[0mcompiler_flag_prefix\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mself\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mcompiler_flag_prefix\u001b[0m\u001b[1;33m,\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m--> 771\u001b[1;33m linker_flag_prefix = self.linker_flag_prefix)\n\u001b[0m\u001b[0;32m 772\u001b[0m \u001b[0mself\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0m_entry_compile_cache\u001b[0m\u001b[1;33m[\u001b[0m\u001b[0mkey\u001b[0m\u001b[1;33m]\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mcompiled_fn\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 773\u001b[0m \u001b[1;32mreturn\u001b[0m \u001b[0mcompiled_fn\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;32m/home/sb358/anaconda/lib/python2.7/site-packages/parakeet/c_backend/compile_util.pyc\u001b[0m in \u001b[0;36mcompile_module_from_source\u001b[1;34m(partial_src, fn_name, fn_signature, src_filename, src_extension, declarations, extra_function_sources, extra_headers, extra_objects, extra_compile_flags, extra_link_flags, print_source, print_commands, compiler, compiler_flag_prefix, linker_flag_prefix)\u001b[0m\n\u001b[0;32m 286\u001b[0m \u001b[1;32mif\u001b[0m \u001b[0mprint_commands\u001b[0m\u001b[1;33m:\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 287\u001b[0m \u001b[1;32mprint\u001b[0m \u001b[1;34m\"Loading newly compiled extension module %s...\"\u001b[0m \u001b[1;33m%\u001b[0m \u001b[0mshared_name\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[1;32m--> 288\u001b[1;33m \u001b[0mmodule\u001b[0m \u001b[1;33m=\u001b[0m \u001b[0mimp\u001b[0m\u001b[1;33m.\u001b[0m\u001b[0mload_dynamic\u001b[0m\u001b[1;33m(\u001b[0m\u001b[0mfn_name\u001b[0m\u001b[1;33m,\u001b[0m \u001b[0mshared_name\u001b[0m\u001b[1;33m)\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0m\u001b[0;32m 289\u001b[0m \u001b[1;33m\u001b[0m\u001b[0m\n\u001b[0;32m 290\u001b[0m \u001b[1;31m#on a UNIX-style filesystem it should be OK to delete a file while it's open\u001b[0m\u001b[1;33m\u001b[0m\u001b[1;33m\u001b[0m\u001b[0m\n",
"\u001b[1;31mImportError\u001b[0m: /homes/mlghomes/sb358/anaconda/bin/../lib/libm.so.6: version `GLIBC_2.15' not found (required by /tmp/parakeet_lse_parakeet_q4ezKG.so)"
]
},
{
"output_type": "stream",
"stream": "stdout",
"text": [
"\n",
"Loading newly compiled extension module /tmp/parakeet_lse_parakeet_q4ezKG.so...\n"
]
}
],
"prompt_number": 8
},
{
"cell_type": "code",
"collapsed": false,
"input": [],
"language": "python",
"metadata": {},
"outputs": []
}
],
"metadata": {}
}
]
}
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