tfmoraes

diff --git a/invesalius/data/viewer_slice.py b/invesalius/data/viewer_slice.py
index ff6344ed..bba882b3 100644
--- a/invesalius/data/viewer_slice.py
+++ b/invesalius/data/viewer_slice.py
@@ -682,14 +682,14 @@ class Viewer(wx.Panel):
         mposx, mposy = wx.GetMousePosition()
         cposx, cposy = self.interactor.ScreenToClient((mposx, mposy))
         mx, my = cposx, self.interactor.GetSize()[1] - cposy
-        if sys.platform == 'darwin':
-            # It's needed to mutiple by scale factor in HighDPI because of

tfmoraes

diff --git a/setup.py b/setup.py
index 9f69c998..2b923001 100644
--- a/setup.py
+++ b/setup.py
@@ -12,8 +12,8 @@ from Cython.Build import cythonize
 from Cython.Distutils import build_ext
 
 if sys.platform == "darwin":
-    unix_copt = ["-Xpreprocessor", "-fopenmp", "-lomp"]
-    unix_lopt = ["-Xpreprocessor", "-fopenmp", "-lomp"]

tfmoraes

❯ nix-shell --show-trace
building '/nix/store/p4jwrw756b2ps1076m3zly5rs8y5hhsz-mach_nix_file.drv'...

Some requirements could not be resolved.
Top level requirements: 
  openvino==2022.1.0
Providers:
  {'_default': ['wheel', 'sdist', 'nixpkgs'],
   'gdal': ['nixpkgs'],
   'pip': ['nixpkgs', 'sdist'],

tfmoraes

diff --git a/invesalius/data/brainmesh_handler.py b/invesalius/data/brainmesh_handler.py
index 172b3c3a..a6f6732b 100644
--- a/invesalius/data/brainmesh_handler.py
+++ b/invesalius/data/brainmesh_handler.py
@@ -33,6 +33,8 @@ class Brain:
         tmpPeel = downsample(refSurface)
         # Standard space coordinates
         mask_sFormMatrix = mask_reader.GetSFormMatrix()
+        if mask_sFormMatrix is None:
+            mask_sFormMatrix = vtk.vtkMatrix4x4()

tfmoraes

diff --git a/src/cmd/create.go b/src/cmd/create.go
index 74e90b1..c94e44d 100644
--- a/src/cmd/create.go
+++ b/src/cmd/create.go
@@ -298,6 +298,56 @@ func createContainer(container, image, release string, showCommandToEnter bool)
 		kcmSocketMount = []string{"--volume", kcmSocketMountArg}
 	}
 
+	var etcStaticMount []string
+    var resolveMount []string

tfmoraes

{
    "name": "python3-modules",
    "buildsystem": "simple",
    "build-commands": [
        "pip3 install --exists-action=i --no-index --find-links=\"file://${PWD}\" --prefix=${FLATPAK_DEST} wxpython numpy scipy imageio scikit-image Pillow pyserial psutil nibabel configparser h5py PyPubsub plaidml-keras cython"
    ],
    "build-options": {
        "env": {
            "WXPYTHON_BUILD_ARGS": "--use_syswx"
        }

tfmoraes

{ lib, pkgs, buildPythonPackage, fetchPypi, unzip, python }:

buildPythonPackage rec {
  pname = "plaidml";
  version = "0.7.0";
  format = "other";

  srcs = [
    (fetchPypi {
      inherit pname version;

tfmoraes

wget -qO - http://repo.radeon.com/rocm/apt/debian/rocm.gpg.key | sudo apt-key add -
echo 'deb [arch=amd64] http://repo.radeon.com/rocm/apt/debian/ xenial main' | sudo tee /etc/apt/sources.list.d/rocm.list

sudo apt update
sudo apt install rocm-dkms

sudo usermod -a -G render $LOGNAME
sudo reboot

tfmoraes

diff --git a/invesalius/data/slice_.py b/invesalius/data/slice_.py
index e53235f5..2380f15d 100644
--- a/invesalius/data/slice_.py
+++ b/invesalius/data/slice_.py
@@ -1381,7 +1381,7 @@ class Slice(with_metaclass(utils.Singleton, object)):
             colorer.SetInputData(image)
             colorer.SetWindow(self.window_width)
             colorer.SetLevel(self.window_level)
-            colorer.SetOutputFormatToRGB()
+            colorer.SetOutputFormatToLuminance()

tfmoraes

import os
import sys
from distutils.core import setup
from distutils.extension import Extension

import numpy
from Cython.Build import cythonize
from Cython.Distutils import build_ext

copt = {"msvc": ["/openmp"], "mingw32": ["-fopenmp"], "unix": ["-fopenmp"]}