Last active
August 20, 2024 15:00
-
-
Save theferrit32/49b95f96d68934e6cd0415f650063b2a to your computer and use it in GitHub Desktop.
gnomad gks lcr and monoallelic example
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
{ | |
"cells": [ | |
{ | |
"cell_type": "code", | |
"execution_count": 1, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/html": [ | |
" <style>\n", | |
" .bk-notebook-logo {\n", | |
" display: block;\n", | |
" width: 20px;\n", | |
" height: 20px;\n", | |
" background-image: url(data:image/png;base64,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);\n", | |
" }\n", | |
" </style>\n", | |
" <div>\n", | |
" <a href=\"https://bokeh.org\" target=\"_blank\" class=\"bk-notebook-logo\"></a>\n", | |
" <span id=\"d111134e-6f8b-480d-bf25-1a7c6b058765\">Loading BokehJS ...</span>\n", | |
" </div>\n" | |
] | |
}, | |
"metadata": {}, | |
"output_type": "display_data" | |
}, | |
{ | |
"data": { | |
"application/javascript": "(function(root) {\n function now() {\n return new Date();\n }\n\n const force = true;\n\n if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n root._bokeh_onload_callbacks = [];\n root._bokeh_is_loading = undefined;\n }\n\nconst JS_MIME_TYPE = 'application/javascript';\n const HTML_MIME_TYPE = 'text/html';\n const EXEC_MIME_TYPE = 'application/vnd.bokehjs_exec.v0+json';\n const CLASS_NAME = 'output_bokeh rendered_html';\n\n /**\n * Render data to the DOM node\n */\n function render(props, node) {\n const script = document.createElement(\"script\");\n node.appendChild(script);\n }\n\n /**\n * Handle when an output is cleared or removed\n */\n function handleClearOutput(event, handle) {\n function drop(id) {\n const view = Bokeh.index.get_by_id(id)\n if (view != null) {\n view.model.document.clear()\n Bokeh.index.delete(view)\n }\n }\n\n const cell = handle.cell;\n\n const id = cell.output_area._bokeh_element_id;\n const server_id = cell.output_area._bokeh_server_id;\n\n // Clean up Bokeh references\n if (id != null) {\n drop(id)\n }\n\n if (server_id !== undefined) {\n // Clean up Bokeh references\n const cmd_clean = \"from bokeh.io.state import curstate; print(curstate().uuid_to_server['\" + server_id + \"'].get_sessions()[0].document.roots[0]._id)\";\n cell.notebook.kernel.execute(cmd_clean, {\n iopub: {\n output: function(msg) {\n const id = msg.content.text.trim()\n drop(id)\n }\n }\n });\n // Destroy server and session\n const cmd_destroy = \"import bokeh.io.notebook as ion; ion.destroy_server('\" + server_id + \"')\";\n cell.notebook.kernel.execute(cmd_destroy);\n }\n }\n\n /**\n * Handle when a new output is added\n */\n function handleAddOutput(event, handle) {\n const output_area = handle.output_area;\n const output = handle.output;\n\n // limit handleAddOutput to display_data with EXEC_MIME_TYPE content only\n if ((output.output_type != \"display_data\") || (!Object.prototype.hasOwnProperty.call(output.data, EXEC_MIME_TYPE))) {\n return\n }\n\n const toinsert = output_area.element.find(\".\" + CLASS_NAME.split(' ')[0]);\n\n if (output.metadata[EXEC_MIME_TYPE][\"id\"] !== undefined) {\n toinsert[toinsert.length - 1].firstChild.textContent = output.data[JS_MIME_TYPE];\n // store reference to embed id on output_area\n output_area._bokeh_element_id = output.metadata[EXEC_MIME_TYPE][\"id\"];\n }\n if (output.metadata[EXEC_MIME_TYPE][\"server_id\"] !== undefined) {\n const bk_div = document.createElement(\"div\");\n bk_div.innerHTML = output.data[HTML_MIME_TYPE];\n const script_attrs = bk_div.children[0].attributes;\n for (let i = 0; i < script_attrs.length; i++) {\n toinsert[toinsert.length - 1].firstChild.setAttribute(script_attrs[i].name, script_attrs[i].value);\n toinsert[toinsert.length - 1].firstChild.textContent = bk_div.children[0].textContent\n }\n // store reference to server id on output_area\n output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n }\n }\n\n function register_renderer(events, OutputArea) {\n\n function append_mime(data, metadata, element) {\n // create a DOM node to render to\n const toinsert = this.create_output_subarea(\n metadata,\n CLASS_NAME,\n EXEC_MIME_TYPE\n );\n this.keyboard_manager.register_events(toinsert);\n // Render to node\n const props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n render(props, toinsert[toinsert.length - 1]);\n element.append(toinsert);\n return toinsert\n }\n\n /* Handle when an output is cleared or removed */\n events.on('clear_output.CodeCell', handleClearOutput);\n events.on('delete.Cell', handleClearOutput);\n\n /* Handle when a new output is added */\n events.on('output_added.OutputArea', handleAddOutput);\n\n /**\n * Register the mime type and append_mime function with output_area\n */\n OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n /* Is output safe? */\n safe: true,\n /* Index of renderer in `output_area.display_order` */\n index: 0\n });\n }\n\n // register the mime type if in Jupyter Notebook environment and previously unregistered\n if (root.Jupyter !== undefined) {\n const events = require('base/js/events');\n const OutputArea = require('notebook/js/outputarea').OutputArea;\n\n if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n register_renderer(events, OutputArea);\n }\n }\n if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n root._bokeh_timeout = Date.now() + 5000;\n root._bokeh_failed_load = false;\n }\n\n const NB_LOAD_WARNING = {'data': {'text/html':\n \"<div style='background-color: #fdd'>\\n\"+\n \"<p>\\n\"+\n \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n \"</p>\\n\"+\n \"<ul>\\n\"+\n \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n \"<li>use INLINE resources instead, as so:</li>\\n\"+\n \"</ul>\\n\"+\n \"<code>\\n\"+\n \"from bokeh.resources import INLINE\\n\"+\n \"output_notebook(resources=INLINE)\\n\"+\n \"</code>\\n\"+\n \"</div>\"}};\n\n function display_loaded() {\n const el = document.getElementById(\"d111134e-6f8b-480d-bf25-1a7c6b058765\");\n if (el != null) {\n el.textContent = \"BokehJS is loading...\";\n }\n if (root.Bokeh !== undefined) {\n if (el != null) {\n el.textContent = \"BokehJS \" + root.Bokeh.version + \" successfully loaded.\";\n }\n } else if (Date.now() < root._bokeh_timeout) {\n setTimeout(display_loaded, 100)\n }\n }\n\n function run_callbacks() {\n try {\n root._bokeh_onload_callbacks.forEach(function(callback) {\n if (callback != null)\n callback();\n });\n } finally {\n delete root._bokeh_onload_callbacks\n }\n console.debug(\"Bokeh: all callbacks have finished\");\n }\n\n function load_libs(css_urls, js_urls, callback) {\n if (css_urls == null) css_urls = [];\n if (js_urls == null) js_urls = [];\n\n root._bokeh_onload_callbacks.push(callback);\n if (root._bokeh_is_loading > 0) {\n console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n return null;\n }\n if (js_urls == null || js_urls.length === 0) {\n run_callbacks();\n return null;\n }\n console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n root._bokeh_is_loading = css_urls.length + js_urls.length;\n\n function on_load() {\n root._bokeh_is_loading--;\n if (root._bokeh_is_loading === 0) {\n console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n run_callbacks()\n }\n }\n\n function on_error(url) {\n console.error(\"failed to load \" + url);\n }\n\n for (let i = 0; i < css_urls.length; i++) {\n const url = css_urls[i];\n const element = document.createElement(\"link\");\n element.onload = on_load;\n element.onerror = on_error.bind(null, url);\n element.rel = \"stylesheet\";\n element.type = \"text/css\";\n element.href = url;\n console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n document.body.appendChild(element);\n }\n\n for (let i = 0; i < js_urls.length; i++) {\n const url = js_urls[i];\n const element = document.createElement('script');\n element.onload = on_load;\n element.onerror = on_error.bind(null, url);\n element.async = false;\n element.src = url;\n console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n document.head.appendChild(element);\n }\n };\n\n function inject_raw_css(css) {\n const element = document.createElement(\"style\");\n element.appendChild(document.createTextNode(css));\n document.body.appendChild(element);\n }\n\n const js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.3.4.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.3.4.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.3.4.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.3.4.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-mathjax-3.3.4.min.js\"];\n const css_urls = [];\n\n const inline_js = [ function(Bokeh) {\n Bokeh.set_log_level(\"info\");\n },\nfunction(Bokeh) {\n }\n ];\n\n function run_inline_js() {\n if (root.Bokeh !== undefined || force === true) {\n for (let i = 0; i < inline_js.length; i++) {\n inline_js[i].call(root, root.Bokeh);\n }\nif (force === true) {\n display_loaded();\n }} else if (Date.now() < root._bokeh_timeout) {\n setTimeout(run_inline_js, 100);\n } else if (!root._bokeh_failed_load) {\n console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n root._bokeh_failed_load = true;\n } else if (force !== true) {\n const cell = $(document.getElementById(\"d111134e-6f8b-480d-bf25-1a7c6b058765\")).parents('.cell').data().cell;\n cell.output_area.append_execute_result(NB_LOAD_WARNING)\n }\n }\n\n if (root._bokeh_is_loading === 0) {\n console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n run_inline_js();\n } else {\n load_libs(css_urls, js_urls, function() {\n console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n run_inline_js();\n });\n }\n}(window));", | |
"application/vnd.bokehjs_load.v0+json": "" | |
}, | |
"metadata": {}, | |
"output_type": "display_data" | |
}, | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"Initializing Hail with default parameters...\n", | |
"SLF4J: Failed to load class \"org.slf4j.impl.StaticLoggerBinder\".\n", | |
"SLF4J: Defaulting to no-operation (NOP) logger implementation\n", | |
"SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details.\n", | |
"Running on Apache Spark version 3.5.2\n", | |
"SparkUI available at http://192.168.1.4:4040\n", | |
"Welcome to\n", | |
" __ __ <>__\n", | |
" / /_/ /__ __/ /\n", | |
" / __ / _ `/ / /\n", | |
" /_/ /_/\\_,_/_/_/ version 0.2.132-678e1f52b999\n", | |
"LOGGING: writing to /Users/kferrite/dev/gnomad_methods/notebooks/hail-20240820-1048-0.2.132-678e1f52b999.log\n" | |
] | |
} | |
], | |
"source": [ | |
"import hail as hl\n", | |
"\n", | |
"hl.default_reference = hl.get_reference(\"GRCh38\")" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 2, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"# ht_url = \"gs://gcp-public-data--gnomad/release/4.0/ht/exomes/gnomad.exomes.v4.0.sites.ht\"\n", | |
"ht_url = (\n", | |
" \"gs://gcp-public-data--gnomad/release/4.0/ht/genomes/gnomad.genomes.v4.0.sites.ht/\"\n", | |
")\n", | |
"\n", | |
"ht = hl.read_table(ht_url)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 3, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"SLF4J: Failed to load class \"org.slf4j.impl.StaticMDCBinder\".\n", | |
"SLF4J: Defaulting to no-operation MDCAdapter implementation.\n", | |
"SLF4J: See http://www.slf4j.org/codes.html#no_static_mdc_binder for further details.\n", | |
"[Stage 1:> (0 + 1) / 1]\r" | |
] | |
}, | |
{ | |
"data": { | |
"text/html": [ | |
"<table><thead><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"31\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"13\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"3\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"48\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"8\"><div style=\"text-align: left;\"></div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"31\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"13\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"3\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"48\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">histograms</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"8\"><div style=\"text-align: left;\"></div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"31\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">info</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"13\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"3\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"20\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">qual_hists</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"20\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">raw_qual_hists</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"8\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">age_hists</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"8\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">in_silico_predictors</div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">grpmax</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">fafmax</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_grpmax</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_fafmax</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">vrs</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"13\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">vep</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">vqsr_results</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"3\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">region_flags</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">allele_info</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gq_hist_all</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">dp_hist_all</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gq_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">dp_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">ab_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gq_hist_all</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">dp_hist_all</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gq_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">dp_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">ab_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">age_hist_het</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">age_hist_hom</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"2\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">cadd</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">locus</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">alleles</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AC</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AF</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AN</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">homozygote_count</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf95_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf95_max_gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf99_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf99_max_gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AC</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AF</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AN</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">homozygote_count</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_faf</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf95_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf95_max_gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf99_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf99_max_gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_fafmax_data_type</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">a_index</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">was_split</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">rsid</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">filters</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">FS</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">MQ</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">MQRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">QUALapprox</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">QD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">ReadPosRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">SB</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">SOR</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VarDP</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_FS</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_MQ</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_MQRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_pab_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_QUALapprox</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_QD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_ReadPosRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_SB_TABLE</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_SOR</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_VarDP</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">singleton</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">transmitted_singleton</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">omni</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">mills</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">monoallelic</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">only_het</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_VQSLOD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">inbreeding_coeff</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_Allele_IDs</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_Starts</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_Ends</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_States</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">allele_string</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">end</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">id</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">input</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">intergenic_consequences</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">most_severe_consequence</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">motif_feature_consequences</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">regulatory_feature_consequences</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">seq_region_name</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">start</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">strand</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">transcript_consequences</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">variant_class</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_VQSLOD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_culprit</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">positive_train_site</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">negative_train_site</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">non_par</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">lcr</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">segdup</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">allele_type</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_alt_alleles</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">variant_type</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">was_mixed</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">phred</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">raw_score</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">revel_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">spliceai_ds_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">pangolin_largest_ds</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">phylop</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">sift_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">polyphen_max</div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">locus<GRCh38></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{AC: int32, AF: float64, AN: int32, homozygote_count: int32}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{faf95: float64, faf99: float64}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{AC: int32, AF: float64, AN: int32, homozygote_count: int32}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{faf95: float64, faf99: float64}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">set<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">set<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{allele_num: int32, consequence_terms: array<str>, impact: str, variant_allele: str}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{allele_num: int32, consequence_terms: array<str>, high_inf_pos: str, impact: str, motif_feature_id: str, motif_name: str, motif_pos: int32, motif_score_change: float64, transcription_factors: array<str>, strand: int32, variant_allele: str}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{allele_num: int32, biotype: str, consequence_terms: array<str>, impact: str, regulatory_feature_id: str, variant_allele: str}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{allele_num: int32, amino_acids: str, appris: str, biotype: str, canonical: int32, ccds: str, cdna_start: int32, cdna_end: int32, cds_end: int32, cds_start: int32, codons: str, consequence_terms: array<str>, distance: int32, domains: array<struct{db: str, name: str}>, exon: str, flags: str, gene_id: str, gene_pheno: int32, gene_symbol: str, gene_symbol_source: str, hgnc_id: str, hgvsc: str, hgvsp: str, hgvs_offset: int32, impact: str, intron: str, lof: str, lof_flags: str, lof_filter: str, lof_info: str, mane_select: str, mane_plus_clinical: str, mirna: array<str>, protein_end: int32, protein_start: int32, protein_id: str, source: str, strand: int32, transcript_id: str, tsl: int32, uniprot_isoform: array<str>, variant_allele: str}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td></tr>\n", | |
"</thead><tbody><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">chr1:10297</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["C","CT"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(0,0.00e+00,51524,0),(1,1.48e-05,67420,0),(0,0.00e+00,26372,0),(0,0.00e+00,2080,0),(0,0.00e+00,46,0),(0,0.00e+00,708,0),(0,0.00e+00,296,0),(0,0.00e+00,1376,0),(0,0.00e+00,14236,0),(0,0.00e+00,962,0),(0,0.00e+00,1308,0),(0,0.00e+00,4140,0),(0,0.00e+00,26902,0),(0,0.00e+00,24622,0),(0,0.00e+00,15100,0),(0,0.00e+00,690,0),(0,0.00e+00,18,0),(0,0.00e+00,330,0),(0,0.00e+00,154,0),(0,0.00e+00,728,0),(0,0.00e+00,7308,0),(0,0.00e+00,422,0),(0,0.00e+00,226,0),(0,0.00e+00,1926,0),(0,0.00e+00,11272,0),(0,0.00e+00,1390,0),(0,0.00e+00,28,0),(0,0.00e+00,378,0),(0,0.00e+00,142,0),(0,0.00e+00,648,0),(0,0.00e+00,6928,0),(0,0.00e+00,540,0),(0,0.00e+00,1082,0),(0,0.00e+00,2214,0),(0,0.00e+00,190,0),(0,0.00e+00,292,0),(0,0.00e+00,0,0),(0,0.00e+00,14,0),(0,0.00e+00,6,0),(0,0.00e+00,12,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,12,0),(0,0.00e+00,16,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,10,0),(0,0.00e+00,8,0),(0,0.00e+00,8,0),(0,0.00e+00,8,0),(0,0.00e+00,6,0),(0,0.00e+00,6,0),(0,0.00e+00,8,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,6,0),(0,0.00e+00,12,0),(0,0.00e+00,4,0),(0,0.00e+00,8,0),(0,0.00e+00,6,0),(0,0.00e+00,4,0),(0,0.00e+00,6,0),(0,0.00e+00,114,0),(0,0.00e+00,76,0),(0,0.00e+00,0,0),(0,0.00e+00,10,0),(0,0.00e+00,2,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,10,0),(0,0.00e+00,10,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,6,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,6,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,56,0),(0,0.00e+00,58,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,6,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,26,0),(0,0.00e+00,30,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0)]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(0,0.00e+00,51524,0),(1,1.48e-05,67420,0),(0,0.00e+00,26372,0),(0,0.00e+00,2080,0),(0,0.00e+00,46,0),(0,0.00e+00,708,0),(0,0.00e+00,296,0),(0,0.00e+00,1376,0),(0,0.00e+00,14236,0),(0,0.00e+00,962,0),(0,0.00e+00,1308,0),(0,0.00e+00,4140,0),(0,0.00e+00,26902,0),(0,0.00e+00,24622,0),(0,0.00e+00,15100,0),(0,0.00e+00,690,0),(0,0.00e+00,18,0),(0,0.00e+00,330,0),(0,0.00e+00,154,0),(0,0.00e+00,728,0),(0,0.00e+00,7308,0),(0,0.00e+00,422,0),(0,0.00e+00,226,0),(0,0.00e+00,1926,0),(0,0.00e+00,11272,0),(0,0.00e+00,1390,0),(0,0.00e+00,28,0),(0,0.00e+00,378,0),(0,0.00e+00,142,0),(0,0.00e+00,648,0),(0,0.00e+00,6928,0),(0,0.00e+00,540,0),(0,0.00e+00,1082,0),(0,0.00e+00,2214,0)]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">{"AC0"}</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.32e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.46e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2.96e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">48426</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.53e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-1.60e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1541,5140,1902,2100]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.04e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10684</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NaN</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.25e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.58e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">495</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.71e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7.20e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1541,5140,5,8]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.84e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">29</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.55e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-1.48e-05</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["ga4gh:VA.g4sgFckNwkoUuFjslpWH81LGi4fBgtEg","ga4gh:VA.Oew4TkElW0CP8CoLf-GhLAGoWnunQOD-"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[10296,10297]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[10297,10297]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["C","T"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"-/T"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10297</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"."</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"chr1\t10297\t.\tC\tCT\t.\t.\tGT"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"upstream_gene_variant"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00209248132","ENSPFM0579",11,NA,["TEAD4::SPDEF"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00524830044","ENSPFM0238",11,NA,["GCM1::MAX"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00206690853","ENSPFM0220",3,NA,["GCM1::ELF1","GCM2::ELK1","GCM1::ETV1","GCM1::ETV4","GCM1::ELK3","GCM1::ERG"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00522400749","ENSPFM0150",1,NA,["ETV2::HOXA2","FLI1::DLX2","HOXB2::ELF1","HOXB2::ELK3","ETV2::DRGX","ELK1::HOXA1","FLI1::DRGX","ETV5::DRGX","ETV5::HOXA2","HOXB2::ELK1"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00208944996","ENSPFM0543",5,NA,["TEAD4::ETV7"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00208753194","ENSPFM0549",14,NA,["TEAD4::FOXI1"],1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00209302952","ENSPFM0578",5,NA,["TEAD4::SPDEF"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00207313426","ENSPFM0328",14,NA,["HOXB2::RFX5"],1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00525891420","ENSPFM0239",17,NA,["GCM1::MAX"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00207130833","ENSPFM0160",18,NA,["ETV2::RFX5"],1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00209464963","ENSPFM0536",4,NA,["TEAD4::EOMES","TEAD4::TBX21"],-1,"T")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,"CTCF_binding_site",["regulatory_region_variant"],"MODIFIER","ENSR00001164744","T")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"chr1"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10298</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,NA,NA,"transcribed_unprocessed_pseudogene",1,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1712,NA,NA,NA,"ENSG00000223972",NA,"DDX11L1","HGNC","HGNC:37102",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",1,"ENST00000450305",NA,NA,"T"),(1,NA,NA,"processed_transcript",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1571,NA,NA,NA,"ENSG00000223972",NA,"DDX11L1","HGNC","HGNC:37102",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",1,"ENST00000456328",1,NA,"T"),(1,NA,NA,"unprocessed_pseudogene",1,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],4106,NA,NA,NA,"ENSG00000227232",NA,"WASH7P","HGNC","HGNC:38034",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",-1,"ENST00000488147",NA,NA,"T"),(1,NA,NA,"transcribed_pseudogene",1,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],4064,NA,NA,NA,"653635",NA,"WASH7P","EntrezGene","HGNC:38034",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"RefSeq",-1,"NR_024540.1",NA,NA,"T"),(1,NA,NA,"transcribed_pseudogene",1,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1576,NA,NA,NA,"100287102",NA,"DDX11L1","EntrezGene","HGNC:37102",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"RefSeq",1,"NR_046018.2",NA,NA,"T")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"insertion"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.55e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"AS_FS"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"ins"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"mixed"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,7885,4270,4440,3251,1561,1582,1026,464,460,279,135,138,65,27,37,142]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,100,87,90,156,324,713,1274,1880,2370,2677,2575,2446,2200,1872,1632,1332,1057,910]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2067</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,4.00e-01,4.50e-01,5.00e-01,5.50e-01,6.00e-01,6.50e-01,7.00e-01,7.50e-01,8.00e-01,8.50e-01,9.00e-01,9.50e-01,1.00e+00]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1424,1839,2156,2413,7914,4287,4452,3265,1569,1585,1031,467,464,284,141,139,68,28,39,145]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[138,125,124,144,232,488,913,1520,2231,2841,3227,3415,3160,2907,2531,2122,1807,1477,1141,974]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2193</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,4.00e-01,4.50e-01,5.00e-01,5.50e-01,6.00e-01,6.50e-01,7.00e-01,7.50e-01,8.00e-01,8.50e-01,9.00e-01,9.50e-01,1.00e+00]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5.30e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.89e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td></tr>\n", | |
"<tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">chr1:10297</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["C","G"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(0,0.00e+00,51524,0),(2,2.97e-05,67420,0),(0,0.00e+00,26372,0),(0,0.00e+00,2080,0),(0,0.00e+00,46,0),(0,0.00e+00,708,0),(0,0.00e+00,296,0),(0,0.00e+00,1376,0),(0,0.00e+00,14236,0),(0,0.00e+00,962,0),(0,0.00e+00,1308,0),(0,0.00e+00,4140,0),(0,0.00e+00,26902,0),(0,0.00e+00,24622,0),(0,0.00e+00,15100,0),(0,0.00e+00,690,0),(0,0.00e+00,18,0),(0,0.00e+00,330,0),(0,0.00e+00,154,0),(0,0.00e+00,728,0),(0,0.00e+00,7308,0),(0,0.00e+00,422,0),(0,0.00e+00,226,0),(0,0.00e+00,1926,0),(0,0.00e+00,11272,0),(0,0.00e+00,1390,0),(0,0.00e+00,28,0),(0,0.00e+00,378,0),(0,0.00e+00,142,0),(0,0.00e+00,648,0),(0,0.00e+00,6928,0),(0,0.00e+00,540,0),(0,0.00e+00,1082,0),(0,0.00e+00,2214,0),(0,0.00e+00,190,0),(0,0.00e+00,292,0),(0,0.00e+00,0,0),(0,0.00e+00,14,0),(0,0.00e+00,6,0),(0,0.00e+00,12,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,12,0),(0,0.00e+00,16,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,10,0),(0,0.00e+00,8,0),(0,0.00e+00,8,0),(0,0.00e+00,8,0),(0,0.00e+00,6,0),(0,0.00e+00,6,0),(0,0.00e+00,8,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,6,0),(0,0.00e+00,12,0),(0,0.00e+00,4,0),(0,0.00e+00,8,0),(0,0.00e+00,6,0),(0,0.00e+00,4,0),(0,0.00e+00,6,0),(0,0.00e+00,114,0),(0,0.00e+00,76,0),(0,0.00e+00,0,0),(0,0.00e+00,10,0),(0,0.00e+00,2,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,10,0),(0,0.00e+00,10,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,6,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,6,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,56,0),(0,0.00e+00,58,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,6,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,26,0),(0,0.00e+00,30,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0)]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(0,0.00e+00,51524,0),(2,2.97e-05,67420,0),(0,0.00e+00,26372,0),(0,0.00e+00,2080,0),(0,0.00e+00,46,0),(0,0.00e+00,708,0),(0,0.00e+00,296,0),(0,0.00e+00,1376,0),(0,0.00e+00,14236,0),(0,0.00e+00,962,0),(0,0.00e+00,1308,0),(0,0.00e+00,4140,0),(0,0.00e+00,26902,0),(0,0.00e+00,24622,0),(0,0.00e+00,15100,0),(0,0.00e+00,690,0),(0,0.00e+00,18,0),(0,0.00e+00,330,0),(0,0.00e+00,154,0),(0,0.00e+00,728,0),(0,0.00e+00,7308,0),(0,0.00e+00,422,0),(0,0.00e+00,226,0),(0,0.00e+00,1926,0),(0,0.00e+00,11272,0),(0,0.00e+00,1390,0),(0,0.00e+00,28,0),(0,0.00e+00,378,0),(0,0.00e+00,142,0),(0,0.00e+00,648,0),(0,0.00e+00,6928,0),(0,0.00e+00,540,0),(0,0.00e+00,1082,0),(0,0.00e+00,2214,0)]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">{"rs868413313"}</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">{"AC0","AS_VQSR"}</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.32e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.46e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2.96e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">48426</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.53e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-1.60e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1541,5140,1902,2100]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.04e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10684</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NaN</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.33e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7.54e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">233</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7.28e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-7.36e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1541,5140,3,5]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.84e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-4.04e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-2.97e-05</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["ga4gh:VA.g4sgFckNwkoUuFjslpWH81LGi4fBgtEg","ga4gh:VA.7RgEXLjMZKds84BmzpYpNSit-R2hIdT6"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[10296,10296]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[10297,10297]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["C","G"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"C/G"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10297</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"."</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"chr1\t10297\t.\tC\tG\t.\t.\tGT"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"upstream_gene_variant"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00209248132","ENSPFM0579",12,-2.00e-02,["TEAD4::SPDEF"],-1,"G"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00524830044","ENSPFM0238",12,-4.10e-02,["GCM1::MAX"],-1,"G"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00206690853","ENSPFM0220",4,2.50e-02,["GCM1::ELF1","GCM2::ELK1","GCM1::ETV1","GCM1::ETV4","GCM1::ELK3","GCM1::ERG"],-1,"G"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00522400749","ENSPFM0150",2,1.60e-02,["ETV2::HOXA2","FLI1::DLX2","HOXB2::ELF1","HOXB2::ELK3","ETV2::DRGX","ELK1::HOXA1","FLI1::DRGX","ETV5::DRGX","ETV5::HOXA2","HOXB2::ELK1"],-1,"G"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00206722406","ENSPFM0357",11,-7.00e-02,["KLF14","SP4","KLF16","SP8","SP3","SP1"],1,"G"),(1,["TF_binding_site_variant"],"Y","MODIFIER","ENSM00208944996","ENSPFM0543",6,-3.80e-02,["TEAD4::ETV7"],-1,"G"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00208753194","ENSPFM0549",13,-5.00e-03,["TEAD4::FOXI1"],1,"G"),(1,["TF_binding_site_variant"],"Y","MODIFIER","ENSM00209302952","ENSPFM0578",6,-4.30e-02,["TEAD4::SPDEF"],-1,"G"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00207313426","ENSPFM0328",13,-6.10e-02,["HOXB2::RFX5"],1,"G"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00525891420","ENSPFM0239",18,-9.00e-03,["GCM1::MAX"],-1,"G"),(1,["TF_binding_site_variant"],"Y","MODIFIER","ENSM00207130833","ENSPFM0160",17,-5.00e-02,["ETV2::RFX5"],1,"G"),(1,["TF_binding_site_variant"],"Y","MODIFIER","ENSM00209464963","ENSPFM0536",5,-1.09e-01,["TEAD4::EOMES","TEAD4::TBX21"],-1,"G")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,"CTCF_binding_site",["regulatory_region_variant"],"MODIFIER","ENSR00001164744","G")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"chr1"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10297</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,NA,NA,"transcribed_unprocessed_pseudogene",1,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1713,NA,NA,NA,"ENSG00000223972",NA,"DDX11L1","HGNC","HGNC:37102",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",1,"ENST00000450305",NA,NA,"G"),(1,NA,NA,"processed_transcript",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1572,NA,NA,NA,"ENSG00000223972",NA,"DDX11L1","HGNC","HGNC:37102",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",1,"ENST00000456328",1,NA,"G"),(1,NA,NA,"unprocessed_pseudogene",1,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],4107,NA,NA,NA,"ENSG00000227232",NA,"WASH7P","HGNC","HGNC:38034",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",-1,"ENST00000488147",NA,NA,"G"),(1,NA,NA,"transcribed_pseudogene",1,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],4065,NA,NA,NA,"653635",NA,"WASH7P","EntrezGene","HGNC:38034",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"RefSeq",-1,"NR_024540.1",NA,NA,"G"),(1,NA,NA,"transcribed_pseudogene",1,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1577,NA,NA,NA,"100287102",NA,"DDX11L1","EntrezGene","HGNC:37102",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"RefSeq",1,"NR_046018.2",NA,NA,"G")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"SNV"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-4.04e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"AS_MQ"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"snv"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"mixed"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,7885,4270,4440,3251,1561,1582,1026,464,460,279,135,138,65,27,37,142]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,100,87,90,156,324,713,1274,1880,2370,2677,2575,2446,2200,1872,1632,1332,1057,910]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2067</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,4.00e-01,4.50e-01,5.00e-01,5.50e-01,6.00e-01,6.50e-01,7.00e-01,7.50e-01,8.00e-01,8.50e-01,9.00e-01,9.50e-01,1.00e+00]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1424,1839,2156,2413,7914,4287,4452,3265,1569,1585,1031,467,464,284,141,139,68,28,39,145]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[138,125,124,144,232,488,913,1520,2231,2841,3227,3415,3160,2907,2531,2122,1807,1477,1141,974]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2193</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,4.00e-01,4.50e-01,5.00e-01,5.50e-01,6.00e-01,6.50e-01,7.00e-01,7.50e-01,8.00e-01,8.50e-01,9.00e-01,9.50e-01,1.00e+00]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7.17e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5.65e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td></tr>\n", | |
"<tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">chr1:10297</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["C","T"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(220,4.27e-03,51510,0),(420,6.23e-03,67426,28),(158,5.99e-03,26362,0),(33,1.59e-02,2074,0),(1,2.17e-02,46,0),(1,1.41e-03,708,0),(0,0.00e+00,296,0),(0,0.00e+00,1376,0),(10,7.02e-04,14240,0),(4,4.17e-03,960,0),(2,1.53e-03,1310,0),(11,2.66e-03,4138,0),(122,4.54e-03,26894,0),(98,3.98e-03,24616,0),(100,6.63e-03,15094,0),(10,1.45e-02,690,0),(0,0.00e+00,18,0),(0,0.00e+00,330,0),(0,0.00e+00,154,0),(0,0.00e+00,728,0),(4,5.47e-04,7306,0),(2,4.74e-03,422,0),(0,0.00e+00,228,0),(6,3.12e-03,1924,0),(58,5.15e-03,11268,0),(23,1.66e-02,1384,0),(1,3.57e-02,28,0),(1,2.65e-03,378,0),(0,0.00e+00,142,0),(0,0.00e+00,648,0),(6,8.65e-04,6934,0),(2,3.72e-03,538,0),(2,1.85e-03,1082,0),(5,2.26e-03,2214,0),(3,1.58e-02,190,0),(11,3.85e-02,286,2),(0,0.00e+00,0,0),(0,0.00e+00,14,0),(0,0.00e+00,8,0),(0,0.00e+00,12,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(1,8.33e-02,12,0),(0,0.00e+00,16,0),(1,2.50e-01,4,0),(0,0.00e+00,2,0),(0,0.00e+00,10,0),(0,0.00e+00,8,0),(0,0.00e+00,8,0),(0,0.00e+00,8,0),(1,1.67e-01,6,0),(0,0.00e+00,6,0),(0,0.00e+00,8,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,6,0),(0,0.00e+00,12,0),(0,0.00e+00,4,0),(0,0.00e+00,6,0),(0,0.00e+00,6,0),(0,0.00e+00,4,0),(0,0.00e+00,6,0),(3,2.63e-02,114,0),(0,0.00e+00,76,0),(0,0.00e+00,0,0),(0,0.00e+00,10,0),(0,0.00e+00,4,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(1,1.00e-01,10,0),(0,0.00e+00,10,0),(1,5.00e-01,2,0),(0,0.00e+00,0,0),(0,0.00e+00,6,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(1,2.50e-01,4,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,6,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,8,0),(0,0.00e+00,4,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(1,1.47e-02,68,0),(1,1.43e-02,70,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,8,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(1,2.50e-01,4,0),(0,0.00e+00,2,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,6,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,30,0),(1,2.63e-02,38,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,8,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(1,5.00e-01,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,4,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,2,0),(0,0.00e+00,2,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(0,0.00e+00,0,0)]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">158</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5.99e-03</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">26362</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(3.81e-03,3.63e-03),(5.23e-03,4.94e-03),(3.80e-04,2.89e-04),(1.42e-03,8.57e-04),(2.71e-04,1.13e-04),(1.49e-03,1.15e-03),NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5.23e-03</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.94e-03</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(220,4.27e-03,51510,0),(420,6.23e-03,67426,28),(158,5.99e-03,26362,0),(33,1.59e-02,2074,0),(1,2.17e-02,46,0),(1,1.41e-03,708,0),(0,0.00e+00,296,0),(0,0.00e+00,1376,0),(10,7.02e-04,14240,0),(4,4.17e-03,960,0),(2,1.53e-03,1310,0),(11,2.66e-03,4138,0),(122,4.54e-03,26894,0),(98,3.98e-03,24616,0),(100,6.63e-03,15094,0),(10,1.45e-02,690,0),(0,0.00e+00,18,0),(0,0.00e+00,330,0),(0,0.00e+00,154,0),(0,0.00e+00,728,0),(4,5.47e-04,7306,0),(2,4.74e-03,422,0),(0,0.00e+00,228,0),(6,3.12e-03,1924,0),(58,5.15e-03,11268,0),(23,1.66e-02,1384,0),(1,3.57e-02,28,0),(1,2.65e-03,378,0),(0,0.00e+00,142,0),(0,0.00e+00,648,0),(6,8.65e-04,6934,0),(2,3.72e-03,538,0),(2,1.85e-03,1082,0),(5,2.26e-03,2214,0)]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">158</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5.99e-03</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">26362</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(3.81e-03,3.63e-03),(5.23e-03,4.94e-03),(3.80e-04,2.89e-04),(1.42e-03,8.57e-04),(2.71e-04,1.13e-04),(1.49e-03,1.15e-03),NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5.23e-03</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.94e-03</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"genomes"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">{"rs868413313"}</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">{"AS_VQSR"}</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.32e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.46e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2.96e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">48426</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.53e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-1.60e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1541,5140,1902,2100]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.04e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10684</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.32e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.46e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.12e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">47698</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.49e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-1.63e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1541,5140,1894,2087]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.04e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10623</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-7.06e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.28e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["ga4gh:VA.g4sgFckNwkoUuFjslpWH81LGi4fBgtEg","ga4gh:VA.lCiFsEupYAEwzTG1HkfBj_c_DLOUCqST"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[10296,10296]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[10297,10297]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["C","T"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"C/T"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10297</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"."</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"chr1\t10297\t.\tC\tT\t.\t.\tGT"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"upstream_gene_variant"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00209248132","ENSPFM0579",12,-8.00e-03,["TEAD4::SPDEF"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00524830044","ENSPFM0238",12,-2.50e-02,["GCM1::MAX"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00206690853","ENSPFM0220",4,-9.00e-03,["GCM1::ELF1","GCM2::ELK1","GCM1::ETV1","GCM1::ETV4","GCM1::ELK3","GCM1::ERG"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00522400749","ENSPFM0150",2,-2.00e-03,["ETV2::HOXA2","FLI1::DLX2","HOXB2::ELF1","HOXB2::ELK3","ETV2::DRGX","ELK1::HOXA1","FLI1::DRGX","ETV5::DRGX","ETV5::HOXA2","HOXB2::ELK1"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00206722406","ENSPFM0357",11,-2.40e-02,["KLF14","SP4","KLF16","SP8","SP3","SP1"],1,"T"),(1,["TF_binding_site_variant"],"Y","MODIFIER","ENSM00208944996","ENSPFM0543",6,-4.50e-02,["TEAD4::ETV7"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00208753194","ENSPFM0549",13,-5.00e-03,["TEAD4::FOXI1"],1,"T"),(1,["TF_binding_site_variant"],"Y","MODIFIER","ENSM00209302952","ENSPFM0578",6,-1.29e-01,["TEAD4::SPDEF"],-1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00207313426","ENSPFM0328",13,-1.70e-02,["HOXB2::RFX5"],1,"T"),(1,["TF_binding_site_variant"],"N","MODIFIER","ENSM00525891420","ENSPFM0239",18,-4.00e-03,["GCM1::MAX"],-1,"T"),(1,["TF_binding_site_variant"],"Y","MODIFIER","ENSM00207130833","ENSPFM0160",17,-3.00e-02,["ETV2::RFX5"],1,"T"),(1,["TF_binding_site_variant"],"Y","MODIFIER","ENSM00209464963","ENSPFM0536",5,-3.80e-02,["TEAD4::EOMES","TEAD4::TBX21"],-1,"T")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,"CTCF_binding_site",["regulatory_region_variant"],"MODIFIER","ENSR00001164744","T")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"chr1"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">10297</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,NA,NA,"transcribed_unprocessed_pseudogene",1,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1713,NA,NA,NA,"ENSG00000223972",NA,"DDX11L1","HGNC","HGNC:37102",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",1,"ENST00000450305",NA,NA,"T"),(1,NA,NA,"processed_transcript",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1572,NA,NA,NA,"ENSG00000223972",NA,"DDX11L1","HGNC","HGNC:37102",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",1,"ENST00000456328",1,NA,"T"),(1,NA,NA,"unprocessed_pseudogene",1,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],4107,NA,NA,NA,"ENSG00000227232",NA,"WASH7P","HGNC","HGNC:38034",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",-1,"ENST00000488147",NA,NA,"T"),(1,NA,NA,"transcribed_pseudogene",1,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],4065,NA,NA,NA,"653635",NA,"WASH7P","EntrezGene","HGNC:38034",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"RefSeq",-1,"NR_024540.1",NA,NA,"T"),(1,NA,NA,"transcribed_pseudogene",1,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1577,NA,NA,NA,"100287102",NA,"DDX11L1","EntrezGene","HGNC:37102",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"RefSeq",1,"NR_046018.2",NA,NA,"T")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"SNV"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-7.06e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"AS_FS"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"snv"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"mixed"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,7885,4269,4437,3250,1559,1581,1025,463,460,278,135,138,63,27,37,142]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,95,83,89,154,323,713,1274,1880,2370,2677,2575,2446,2200,1872,1632,1332,1057,910]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2067</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,12,6,11,9,8,9,8,13,9,10,9,7,5,8,10,86]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,43,44,40,44,26,13,8,2,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,4.00e-01,4.50e-01,5.00e-01,5.50e-01,6.00e-01,6.50e-01,7.00e-01,7.50e-01,8.00e-01,8.50e-01,9.00e-01,9.50e-01,1.00e+00]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,18,33,34,44,38,22,15,10,4,0,1,1,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1424,1839,2156,2413,7914,4287,4452,3265,1569,1585,1031,467,464,284,141,139,68,28,39,145]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[138,125,124,144,232,488,913,1520,2231,2841,3227,3415,3160,2907,2531,2122,1807,1477,1141,974]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2193</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[22,14,18,18,22,17,26,23,17,13,14,17,12,16,15,8,10,9,12,89]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[70,67,55,52,45,50,29,13,9,2,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,4.00e-01,4.50e-01,5.00e-01,5.50e-01,6.00e-01,6.50e-01,7.00e-01,7.50e-01,8.00e-01,8.50e-01,9.00e-01,9.50e-01,1.00e+00]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,6,19,26,48,56,49,50,22,34,16,10,13,3,6,5,0,0,1]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1,1,10,7,16,12,14,13,4,5]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7.58e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">6.07e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td></tr>\n", | |
"</tbody></table>" | |
], | |
"text/plain": [ | |
"+---------------+------------+\n", | |
"| locus | alleles |\n", | |
"+---------------+------------+\n", | |
"| locus<GRCh38> | array<str> |\n", | |
"+---------------+------------+\n", | |
"| chr1:10297 | [\"C\",\"CT\"] |\n", | |
"| chr1:10297 | [\"C\",\"G\"] |\n", | |
"| chr1:10297 | [\"C\",\"T\"] |\n", | |
"+---------------+------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{AC: int32, AF: float64, AN: int32, homozygote_count: int32}> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(0,0.00e+00,51524,0),(1,1.48e-05,67420,0),(0,0.00e+00,26372,0),(0,0.00e+... |\n", | |
"| [(0,0.00e+00,51524,0),(2,2.97e-05,67420,0),(0,0.00e+00,26372,0),(0,0.00e+... |\n", | |
"| [(220,4.27e-03,51510,0),(420,6.23e-03,67426,28),(158,5.99e-03,26362,0),(3... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-----------+-----------+-----------+-------------------------+----------------+\n", | |
"| grpmax.AC | grpmax.AF | grpmax.AN | grpmax.homozygote_count | grpmax.gen_anc |\n", | |
"+-----------+-----------+-----------+-------------------------+----------------+\n", | |
"| int32 | float64 | int32 | int32 | str |\n", | |
"+-----------+-----------+-----------+-------------------------+----------------+\n", | |
"| NA | NA | NA | NA | NA |\n", | |
"| NA | NA | NA | NA | NA |\n", | |
"| 158 | 5.99e-03 | 26362 | 0 | \"nfe\" |\n", | |
"+-----------+-----------+-----------+-------------------------+----------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| faf |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{faf95: float64, faf99: float64}> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.... |\n", | |
"| [(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.... |\n", | |
"| [(3.81e-03,3.63e-03),(5.23e-03,4.94e-03),(3.80e-04,2.89e-04),(1.42e-03,8.... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------+--------------------------+------------------+\n", | |
"| fafmax.faf95_max | fafmax.faf95_max_gen_anc | fafmax.faf99_max |\n", | |
"+------------------+--------------------------+------------------+\n", | |
"| float64 | str | float64 |\n", | |
"+------------------+--------------------------+------------------+\n", | |
"| NA | NA | NA |\n", | |
"| NA | NA | NA |\n", | |
"| 5.23e-03 | \"nfe\" | 4.94e-03 |\n", | |
"+------------------+--------------------------+------------------+\n", | |
"\n", | |
"+--------------------------+\n", | |
"| fafmax.faf99_max_gen_anc |\n", | |
"+--------------------------+\n", | |
"| str |\n", | |
"+--------------------------+\n", | |
"| NA |\n", | |
"| NA |\n", | |
"| \"nfe\" |\n", | |
"+--------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| joint_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{AC: int32, AF: float64, AN: int32, homozygote_count: int32}> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(0,0.00e+00,51524,0),(1,1.48e-05,67420,0),(0,0.00e+00,26372,0),(0,0.00e+... |\n", | |
"| [(0,0.00e+00,51524,0),(2,2.97e-05,67420,0),(0,0.00e+00,26372,0),(0,0.00e+... |\n", | |
"| [(220,4.27e-03,51510,0),(420,6.23e-03,67426,28),(158,5.99e-03,26362,0),(3... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-----------------+-----------------+-----------------+\n", | |
"| joint_grpmax.AC | joint_grpmax.AF | joint_grpmax.AN |\n", | |
"+-----------------+-----------------+-----------------+\n", | |
"| int32 | float64 | int32 |\n", | |
"+-----------------+-----------------+-----------------+\n", | |
"| NA | NA | NA |\n", | |
"| NA | NA | NA |\n", | |
"| 158 | 5.99e-03 | 26362 |\n", | |
"+-----------------+-----------------+-----------------+\n", | |
"\n", | |
"+-------------------------------+----------------------+\n", | |
"| joint_grpmax.homozygote_count | joint_grpmax.gen_anc |\n", | |
"+-------------------------------+----------------------+\n", | |
"| int32 | str |\n", | |
"+-------------------------------+----------------------+\n", | |
"| NA | NA |\n", | |
"| NA | NA |\n", | |
"| 0 | \"nfe\" |\n", | |
"+-------------------------------+----------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| joint_faf |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{faf95: float64, faf99: float64}> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.... |\n", | |
"| [(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.00e+00),(0.00e+00,0.... |\n", | |
"| [(3.81e-03,3.63e-03),(5.23e-03,4.94e-03),(3.80e-04,2.89e-04),(1.42e-03,8.... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------+--------------------------------+\n", | |
"| joint_fafmax.faf95_max | joint_fafmax.faf95_max_gen_anc |\n", | |
"+------------------------+--------------------------------+\n", | |
"| float64 | str |\n", | |
"+------------------------+--------------------------------+\n", | |
"| NA | NA |\n", | |
"| NA | NA |\n", | |
"| 5.23e-03 | \"nfe\" |\n", | |
"+------------------------+--------------------------------+\n", | |
"\n", | |
"+------------------------+--------------------------------+\n", | |
"| joint_fafmax.faf99_max | joint_fafmax.faf99_max_gen_anc |\n", | |
"+------------------------+--------------------------------+\n", | |
"| float64 | str |\n", | |
"+------------------------+--------------------------------+\n", | |
"| NA | NA |\n", | |
"| NA | NA |\n", | |
"| 4.94e-03 | \"nfe\" |\n", | |
"+------------------------+--------------------------------+\n", | |
"\n", | |
"+-------------------------------------+---------+-----------+-----------------+\n", | |
"| joint_fafmax.joint_fafmax_data_type | a_index | was_split | rsid |\n", | |
"+-------------------------------------+---------+-----------+-----------------+\n", | |
"| str | int32 | bool | set<str> |\n", | |
"+-------------------------------------+---------+-----------+-----------------+\n", | |
"| NA | 1 | True | NA |\n", | |
"| NA | 2 | True | {\"rs868413313\"} |\n", | |
"| \"genomes\" | 3 | True | {\"rs868413313\"} |\n", | |
"+-------------------------------------+---------+-----------+-----------------+\n", | |
"\n", | |
"+-------------------+----------+----------+----------------+-----------------+\n", | |
"| filters | info.FS | info.MQ | info.MQRankSum | info.QUALapprox |\n", | |
"+-------------------+----------+----------+----------------+-----------------+\n", | |
"| set<str> | float64 | float64 | float64 | int64 |\n", | |
"+-------------------+----------+----------+----------------+-----------------+\n", | |
"| {\"AC0\"} | 3.32e+01 | 3.46e+01 | 2.96e-01 | 48426 |\n", | |
"| {\"AC0\",\"AS_VQSR\"} | 3.32e+01 | 3.46e+01 | 2.96e-01 | 48426 |\n", | |
"| {\"AS_VQSR\"} | 3.32e+01 | 3.46e+01 | 2.96e-01 | 48426 |\n", | |
"+-------------------+----------+----------+----------------+-----------------+\n", | |
"\n", | |
"+----------+---------------------+-----------------------+----------+\n", | |
"| info.QD | info.ReadPosRankSum | info.SB | info.SOR |\n", | |
"+----------+---------------------+-----------------------+----------+\n", | |
"| float32 | float64 | array<int32> | float64 |\n", | |
"+----------+---------------------+-----------------------+----------+\n", | |
"| 4.53e+00 | -1.60e+00 | [1541,5140,1902,2100] | 1.04e-01 |\n", | |
"| 4.53e+00 | -1.60e+00 | [1541,5140,1902,2100] | 1.04e-01 |\n", | |
"| 4.53e+00 | -1.60e+00 | [1541,5140,1902,2100] | 1.04e-01 |\n", | |
"+----------+---------------------+-----------------------+----------+\n", | |
"\n", | |
"+------------+------------+------------+-------------------+-----------------+\n", | |
"| info.VarDP | info.AS_FS | info.AS_MQ | info.AS_MQRankSum | info.AS_pab_max |\n", | |
"+------------+------------+------------+-------------------+-----------------+\n", | |
"| int32 | float64 | float64 | float64 | float64 |\n", | |
"+------------+------------+------------+-------------------+-----------------+\n", | |
"| 10684 | NaN | 3.25e+01 | 3.58e-01 | 1.00e+00 |\n", | |
"| 10684 | NaN | 3.33e+01 | 7.54e-01 | 1.00e+00 |\n", | |
"| 10684 | 3.32e+01 | 3.46e+01 | 3.12e-01 | 1.00e+00 |\n", | |
"+------------+------------+------------+-------------------+-----------------+\n", | |
"\n", | |
"+--------------------+------------+------------------------+\n", | |
"| info.AS_QUALapprox | info.AS_QD | info.AS_ReadPosRankSum |\n", | |
"+--------------------+------------+------------------------+\n", | |
"| int64 | float32 | float64 |\n", | |
"+--------------------+------------+------------------------+\n", | |
"| 495 | 1.71e+01 | 7.20e-01 |\n", | |
"| 233 | 7.28e+00 | -7.36e-01 |\n", | |
"| 47698 | 4.49e+00 | -1.63e+00 |\n", | |
"+--------------------+------------+------------------------+\n", | |
"\n", | |
"+-----------------------+-------------+---------------+----------------+\n", | |
"| info.AS_SB_TABLE | info.AS_SOR | info.AS_VarDP | info.singleton |\n", | |
"+-----------------------+-------------+---------------+----------------+\n", | |
"| array<int32> | float64 | int32 | bool |\n", | |
"+-----------------------+-------------+---------------+----------------+\n", | |
"| [1541,5140,5,8] | 1.84e-01 | 29 | True |\n", | |
"| [1541,5140,3,5] | 1.84e-01 | 32 | False |\n", | |
"| [1541,5140,1894,2087] | 1.04e-01 | 10623 | False |\n", | |
"+-----------------------+-------------+---------------+----------------+\n", | |
"\n", | |
"+----------------------------+-----------+------------+------------------+\n", | |
"| info.transmitted_singleton | info.omni | info.mills | info.monoallelic |\n", | |
"+----------------------------+-----------+------------+------------------+\n", | |
"| bool | bool | bool | bool |\n", | |
"+----------------------------+-----------+------------+------------------+\n", | |
"| False | NA | NA | False |\n", | |
"| NA | NA | NA | False |\n", | |
"| NA | NA | NA | False |\n", | |
"+----------------------------+-----------+------------+------------------+\n", | |
"\n", | |
"+---------------+----------------+-----------------------+\n", | |
"| info.only_het | info.AS_VQSLOD | info.inbreeding_coeff |\n", | |
"+---------------+----------------+-----------------------+\n", | |
"| bool | float64 | float64 |\n", | |
"+---------------+----------------+-----------------------+\n", | |
"| False | 1.55e+01 | -1.48e-05 |\n", | |
"| False | -4.04e+00 | -2.97e-05 |\n", | |
"| False | -7.06e+00 | 1.28e-01 |\n", | |
"+---------------+----------------+-----------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| info.vrs.VRS_Allele_IDs |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<str> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [\"ga4gh:VA.g4sgFckNwkoUuFjslpWH81LGi4fBgtEg\",\"ga4gh:VA.Oew4TkElW0CP8CoLf-... |\n", | |
"| [\"ga4gh:VA.g4sgFckNwkoUuFjslpWH81LGi4fBgtEg\",\"ga4gh:VA.7RgEXLjMZKds84Bmzp... |\n", | |
"| [\"ga4gh:VA.g4sgFckNwkoUuFjslpWH81LGi4fBgtEg\",\"ga4gh:VA.lCiFsEupYAEwzTG1Hk... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"| info.vrs.VRS_Starts | info.vrs.VRS_Ends | info.vrs.VRS_States |\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"| array<int32> | array<int32> | array<str> |\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"| [10296,10297] | [10297,10297] | [\"C\",\"T\"] |\n", | |
"| [10296,10296] | [10297,10297] | [\"C\",\"G\"] |\n", | |
"| [10296,10296] | [10297,10297] | [\"C\",\"T\"] |\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"\n", | |
"+-------------------+---------+--------+----------------------------+\n", | |
"| vep.allele_string | vep.end | vep.id | vep.input |\n", | |
"+-------------------+---------+--------+----------------------------+\n", | |
"| str | int32 | str | str |\n", | |
"+-------------------+---------+--------+----------------------------+\n", | |
"| \"-/T\" | 10297 | \".\" | \"chr1\t10297\t.\tC\tCT\t.\t.\tGT\" |\n", | |
"| \"C/G\" | 10297 | \".\" | \"chr1\t10297\t.\tC\tG\t.\t.\tGT\" |\n", | |
"| \"C/T\" | 10297 | \".\" | \"chr1\t10297\t.\tC\tT\t.\t.\tGT\" |\n", | |
"+-------------------+---------+--------+----------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| vep.intergenic_consequences |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{allele_num: int32, consequence_terms: array<str>, impact: st... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| NA |\n", | |
"| NA |\n", | |
"| NA |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-----------------------------+\n", | |
"| vep.most_severe_consequence |\n", | |
"+-----------------------------+\n", | |
"| str |\n", | |
"+-----------------------------+\n", | |
"| \"upstream_gene_variant\" |\n", | |
"| \"upstream_gene_variant\" |\n", | |
"| \"upstream_gene_variant\" |\n", | |
"+-----------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| vep.motif_feature_consequences |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{allele_num: int32, consequence_terms: array<str>, high_inf_p... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(1,[\"TF_binding_site_variant\"],\"N\",\"MODIFIER\",\"ENSM00209248132\",\"ENSPFM0... |\n", | |
"| [(1,[\"TF_binding_site_variant\"],\"N\",\"MODIFIER\",\"ENSM00209248132\",\"ENSPFM0... |\n", | |
"| [(1,[\"TF_binding_site_variant\"],\"N\",\"MODIFIER\",\"ENSM00209248132\",\"ENSPFM0... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| vep.regulatory_feature_consequences |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{allele_num: int32, biotype: str, consequence_terms: array<st... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(1,\"CTCF_binding_site\",[\"regulatory_region_variant\"],\"MODIFIER\",\"ENSR000... |\n", | |
"| [(1,\"CTCF_binding_site\",[\"regulatory_region_variant\"],\"MODIFIER\",\"ENSR000... |\n", | |
"| [(1,\"CTCF_binding_site\",[\"regulatory_region_variant\"],\"MODIFIER\",\"ENSR000... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------+-----------+------------+\n", | |
"| vep.seq_region_name | vep.start | vep.strand |\n", | |
"+---------------------+-----------+------------+\n", | |
"| str | int32 | int32 |\n", | |
"+---------------------+-----------+------------+\n", | |
"| \"chr1\" | 10298 | 1 |\n", | |
"| \"chr1\" | 10297 | 1 |\n", | |
"| \"chr1\" | 10297 | 1 |\n", | |
"+---------------------+-----------+------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| vep.transcript_consequences |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{allele_num: int32, amino_acids: str, appris: str, biotype: s... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(1,NA,NA,\"transcribed_unprocessed_pseudogene\",1,NA,NA,NA,NA,NA,NA,[\"upst... |\n", | |
"| [(1,NA,NA,\"transcribed_unprocessed_pseudogene\",1,NA,NA,NA,NA,NA,NA,[\"upst... |\n", | |
"| [(1,NA,NA,\"transcribed_unprocessed_pseudogene\",1,NA,NA,NA,NA,NA,NA,[\"upst... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------+------------------------+-------------------------+\n", | |
"| vep.variant_class | vqsr_results.AS_VQSLOD | vqsr_results.AS_culprit |\n", | |
"+-------------------+------------------------+-------------------------+\n", | |
"| str | float64 | str |\n", | |
"+-------------------+------------------------+-------------------------+\n", | |
"| \"insertion\" | 1.55e+01 | \"AS_FS\" |\n", | |
"| \"SNV\" | -4.04e+00 | \"AS_MQ\" |\n", | |
"| \"SNV\" | -7.06e+00 | \"AS_FS\" |\n", | |
"+-------------------+------------------------+-------------------------+\n", | |
"\n", | |
"+----------------------------------+----------------------------------+\n", | |
"| vqsr_results.positive_train_site | vqsr_results.negative_train_site |\n", | |
"+----------------------------------+----------------------------------+\n", | |
"| bool | bool |\n", | |
"+----------------------------------+----------------------------------+\n", | |
"| False | False |\n", | |
"| False | False |\n", | |
"| False | False |\n", | |
"+----------------------------------+----------------------------------+\n", | |
"\n", | |
"+----------------------+------------------+---------------------+\n", | |
"| region_flags.non_par | region_flags.lcr | region_flags.segdup |\n", | |
"+----------------------+------------------+---------------------+\n", | |
"| bool | bool | bool |\n", | |
"+----------------------+------------------+---------------------+\n", | |
"| False | True | True |\n", | |
"| False | True | True |\n", | |
"| False | True | True |\n", | |
"+----------------------+------------------+---------------------+\n", | |
"\n", | |
"+-------------------------+---------------------------+\n", | |
"| allele_info.allele_type | allele_info.n_alt_alleles |\n", | |
"+-------------------------+---------------------------+\n", | |
"| str | int32 |\n", | |
"+-------------------------+---------------------------+\n", | |
"| \"ins\" | 3 |\n", | |
"| \"snv\" | 3 |\n", | |
"| \"snv\" | 3 |\n", | |
"+-------------------------+---------------------------+\n", | |
"\n", | |
"+--------------------------+-----------------------+\n", | |
"| allele_info.variant_type | allele_info.was_mixed |\n", | |
"+--------------------------+-----------------------+\n", | |
"| str | bool |\n", | |
"+--------------------------+-----------------------+\n", | |
"| \"mixed\" | True |\n", | |
"| \"mixed\" | True |\n", | |
"| \"mixed\" | True |\n", | |
"+--------------------------+-----------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_all.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_all.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0,0,0,0,7885,4270,4440,3251,1561,1582,1026,464,460,279,135,138,65,27,37,... |\n", | |
"| [0,0,0,0,7885,4270,4440,3251,1561,1582,1026,464,460,279,135,138,65,27,37,... |\n", | |
"| [0,0,0,0,7885,4269,4437,3250,1559,1581,1025,463,460,278,135,138,63,27,37,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_all.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_all.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_all.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_all.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0,0,100,87,90,156,324,713,1274,1880,2370,2677,2575,2446,2200,1872,1632,1... |\n", | |
"| [0,0,100,87,90,156,324,713,1274,1880,2370,2677,2575,2446,2200,1872,1632,1... |\n", | |
"| [0,0,95,83,89,154,323,713,1274,1880,2370,2677,2575,2446,2200,1872,1632,13... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_all.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_all.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 2067 |\n", | |
"| 2067 |\n", | |
"| 2067 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_alt.bin_freq |\n", | |
"+-------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+-------------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,12,6,11,9,8,9,8,13,9,10,9,7,5,8,10,86] |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_alt.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_alt.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_alt.bin_freq |\n", | |
"+-------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+-------------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,43,44,40,44,26,13,8,2,0,0,0,0,0,0,0,0,0,0] |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_alt.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_alt.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.ab_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,... |\n", | |
"| [0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,... |\n", | |
"| [0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------------+\n", | |
"| histograms.qual_hists.ab_hist_alt.bin_freq |\n", | |
"+---------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+---------------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,18,33,34,44,38,22,15,10,4,0,1,1,0,0,0,0] |\n", | |
"+---------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.ab_hist_alt.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.ab_hist_alt.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_all.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_all.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [1424,1839,2156,2413,7914,4287,4452,3265,1569,1585,1031,467,464,284,141,1... |\n", | |
"| [1424,1839,2156,2413,7914,4287,4452,3265,1569,1585,1031,467,464,284,141,1... |\n", | |
"| [1424,1839,2156,2413,7914,4287,4452,3265,1569,1585,1031,467,464,284,141,1... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_all.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_all.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_all.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_all.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [138,125,124,144,232,488,913,1520,2231,2841,3227,3415,3160,2907,2531,2122... |\n", | |
"| [138,125,124,144,232,488,913,1520,2231,2841,3227,3415,3160,2907,2531,2122... |\n", | |
"| [138,125,124,144,232,488,913,1520,2231,2841,3227,3415,3160,2907,2531,2122... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_all.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_all.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 2193 |\n", | |
"| 2193 |\n", | |
"| 2193 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_alt.bin_freq |\n", | |
"+-------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+-------------------------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0] |\n", | |
"| [22,14,18,18,22,17,26,23,17,13,14,17,12,16,15,8,10,9,12,89] |\n", | |
"+-------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_alt.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_alt.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_alt.bin_freq |\n", | |
"+---------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+---------------------------------------------------+\n", | |
"| [1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [1,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [70,67,55,52,45,50,29,13,9,2,0,0,0,0,0,0,0,0,0,0] |\n", | |
"+---------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_alt.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_alt.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.ab_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,... |\n", | |
"| [0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,... |\n", | |
"| [0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.ab_hist_alt.bin_freq |\n", | |
"+------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,0,1,0,0,0,0,0,0,0,1,0,0,0,0,0,0] |\n", | |
"| [0,0,6,19,26,48,56,49,50,22,34,16,10,13,3,6,5,0,0,1] |\n", | |
"+------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.ab_hist_alt.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.ab_hist_alt.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_het.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,... |\n", | |
"| [3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,... |\n", | |
"| [3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_het.bin_freq |\n", | |
"+--------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+--------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [1,1,10,7,16,12,14,13,4,5] |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_het.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 7 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_het.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 3 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_hom.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,... |\n", | |
"| [3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,... |\n", | |
"| [3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_hom.bin_freq |\n", | |
"+--------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+--------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,0,0,0,0,0,0] |\n", | |
"| [0,0,0,0,0,0,0,0,0,0] |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_hom.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+---------------------------------+\n", | |
"| histograms.age_hists.age_hist_hom.n_larger | in_silico_predictors.cadd.phred |\n", | |
"+--------------------------------------------+---------------------------------+\n", | |
"| int64 | float32 |\n", | |
"+--------------------------------------------+---------------------------------+\n", | |
"| 0 | 5.30e+00 |\n", | |
"| 0 | 7.17e+00 |\n", | |
"| 0 | 7.58e+00 |\n", | |
"+--------------------------------------------+---------------------------------+\n", | |
"\n", | |
"+-------------------------------------+--------------------------------+\n", | |
"| in_silico_predictors.cadd.raw_score | in_silico_predictors.revel_max |\n", | |
"+-------------------------------------+--------------------------------+\n", | |
"| float32 | float64 |\n", | |
"+-------------------------------------+--------------------------------+\n", | |
"| 3.89e-01 | NA |\n", | |
"| 5.65e-01 | NA |\n", | |
"| 6.07e-01 | NA |\n", | |
"+-------------------------------------+--------------------------------+\n", | |
"\n", | |
"+--------------------------------------+\n", | |
"| in_silico_predictors.spliceai_ds_max |\n", | |
"+--------------------------------------+\n", | |
"| float32 |\n", | |
"+--------------------------------------+\n", | |
"| NA |\n", | |
"| NA |\n", | |
"| NA |\n", | |
"+--------------------------------------+\n", | |
"\n", | |
"+------------------------------------------+-----------------------------+\n", | |
"| in_silico_predictors.pangolin_largest_ds | in_silico_predictors.phylop |\n", | |
"+------------------------------------------+-----------------------------+\n", | |
"| float64 | float64 |\n", | |
"+------------------------------------------+-----------------------------+\n", | |
"| NA | 0.00e+00 |\n", | |
"| NA | 0.00e+00 |\n", | |
"| NA | 0.00e+00 |\n", | |
"+------------------------------------------+-----------------------------+\n", | |
"\n", | |
"+-------------------------------+-----------------------------------+\n", | |
"| in_silico_predictors.sift_max | in_silico_predictors.polyphen_max |\n", | |
"+-------------------------------+-----------------------------------+\n", | |
"| float64 | float64 |\n", | |
"+-------------------------------+-----------------------------------+\n", | |
"| NA | NA |\n", | |
"| NA | NA |\n", | |
"| NA | NA |\n", | |
"+-------------------------------+-----------------------------------+" | |
] | |
}, | |
"metadata": {}, | |
"output_type": "display_data" | |
} | |
], | |
"source": [ | |
"# LCR example\n", | |
"# chr1:10297\t[\"C\",\"T\"]\n", | |
"\n", | |
"ht_lcr = ht.filter(ht.locus == hl.locus(\"chr1\", 10297, reference_genome=\"GRCh38\"))\n", | |
"ht_lcr.show()" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 4, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"/Users/kferrite/dev/gnomad_methods/venv/lib/python3.12/site-packages/python_jsonschema_objects/__init__.py:46: UserWarning:\n", | |
"\n", | |
"Schema version http://json-schema.org/draft-07/schema not recognized. Some keywords and features may not be supported.\n", | |
"\n" | |
] | |
}, | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"2024-08-20 10:48:36.363 Hail: INFO: wrote table with 3 rows in 1 partition to /tmp/vrs_checkpoint-3zkQ4Anm5OzY6J7WX1NPxj.ht\n", | |
"2024-08-20 10:48:48.195 Hail: INFO: wrote table with 1 row in 1 partition to /tmp/vrs_checkpoint-jZSie4HlokuWSYWIjTzpcM.ht\n" | |
] | |
} | |
], | |
"source": [ | |
"from gnomad.resources.grch38.gnomad import gnomad_gks\n", | |
"\n", | |
"annotations_lcr = gnomad_gks(\n", | |
" locus_interval=hl.interval(\n", | |
" hl.locus(\"chr1\", 10297, reference_genome=\"GRCh38\"),\n", | |
" hl.locus(\"chr1\", 10297 + 1, reference_genome=\"GRCh38\"),\n", | |
" ),\n", | |
" version=\"4.0\",\n", | |
" data_type=\"genomes\",\n", | |
" custom_ht=ht_lcr,\n", | |
")" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 5, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"3\n", | |
"True\n", | |
"True\n", | |
"True\n" | |
] | |
} | |
], | |
"source": [ | |
"print(len(annotations_lcr))\n", | |
"for a in annotations_lcr:\n", | |
" print(a[\"gks_va_freq\"][\"qualityMeasures\"][\"lowComplexityRegion\"])" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 6, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"[Stage 5:> (0 + 1) / 1]\r" | |
] | |
}, | |
{ | |
"data": { | |
"text/html": [ | |
"<table><thead><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"31\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"13\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"3\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"48\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"8\"><div style=\"text-align: left;\"></div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"31\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"13\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"3\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"48\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">histograms</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"8\"><div style=\"text-align: left;\"></div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"31\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">info</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"13\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"3\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"20\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">qual_hists</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"20\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">raw_qual_hists</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"8\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">age_hists</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"8\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">in_silico_predictors</div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">grpmax</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">fafmax</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_grpmax</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"5\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_fafmax</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">vrs</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"13\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">vep</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">vqsr_results</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"3\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">region_flags</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">allele_info</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gq_hist_all</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">dp_hist_all</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gq_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">dp_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">ab_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gq_hist_all</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">dp_hist_all</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gq_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">dp_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">ab_hist_alt</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">age_hist_het</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">age_hist_hom</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"2\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">cadd</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">locus</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">alleles</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AC</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AF</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AN</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">homozygote_count</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf95_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf95_max_gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf99_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf99_max_gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AC</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AF</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AN</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">homozygote_count</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_faf</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf95_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf95_max_gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf99_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">faf99_max_gen_anc</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">joint_fafmax_data_type</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">a_index</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">was_split</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">rsid</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">filters</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">FS</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">MQ</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">MQRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">QUALapprox</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">QD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">ReadPosRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">SB</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">SOR</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VarDP</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_FS</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_MQ</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_MQRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_pab_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_QUALapprox</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_QD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_ReadPosRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_SB_TABLE</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_SOR</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_VarDP</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">singleton</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">transmitted_singleton</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">omni</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">mills</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">monoallelic</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">only_het</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_VQSLOD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">inbreeding_coeff</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_Allele_IDs</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_Starts</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_Ends</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_States</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">allele_string</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">end</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">id</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">input</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">intergenic_consequences</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">most_severe_consequence</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">motif_feature_consequences</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">regulatory_feature_consequences</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">seq_region_name</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">start</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">strand</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">transcript_consequences</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">variant_class</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_VQSLOD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_culprit</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">positive_train_site</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">negative_train_site</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">non_par</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">lcr</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">segdup</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">allele_type</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_alt_alleles</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">variant_type</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">was_mixed</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_edges</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">bin_freq</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_smaller</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">n_larger</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">phred</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">raw_score</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">revel_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">spliceai_ds_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">pangolin_largest_ds</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">phylop</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">sift_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">polyphen_max</div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">locus<GRCh38></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{AC: int32, AF: float64, AN: int32, homozygote_count: int32}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{faf95: float64, faf99: float64}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{AC: int32, AF: float64, AN: int32, homozygote_count: int32}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{faf95: float64, faf99: float64}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">set<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">set<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{allele_num: int32, consequence_terms: array<str>, impact: str, variant_allele: str}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{allele_num: int32, consequence_terms: array<str>, high_inf_pos: str, impact: str, motif_feature_id: str, motif_name: str, motif_pos: int32, motif_score_change: float64, transcription_factors: array<str>, strand: int32, variant_allele: str}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{allele_num: int32, biotype: str, consequence_terms: array<str>, impact: str, regulatory_feature_id: str, variant_allele: str}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<struct{allele_num: int32, amino_acids: str, appris: str, biotype: str, canonical: int32, ccds: str, cdna_start: int32, cdna_end: int32, cds_end: int32, cds_start: int32, codons: str, consequence_terms: array<str>, distance: int32, domains: array<struct{db: str, name: str}>, exon: str, flags: str, gene_id: str, gene_pheno: int32, gene_symbol: str, gene_symbol_source: str, hgnc_id: str, hgvsc: str, hgvsp: str, hgvs_offset: int32, impact: str, intron: str, lof: str, lof_flags: str, lof_filter: str, lof_info: str, mane_select: str, mane_plus_clinical: str, mirna: array<str>, protein_end: int32, protein_start: int32, protein_id: str, source: str, strand: int32, transcript_id: str, tsl: int32, uniprot_isoform: array<str>, variant_allele: str}></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">str</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<float64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int64></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td></tr>\n", | |
"</thead><tbody><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">chr1:1782275</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["T","G"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(152336,1.00e+00,152336,76168),(152430,1.00e+00,152430,76215),(68026,1.00e+00,68026,34013),(10626,1.00e+00,10626,5313),(294,1.00e+00,294,147),(2114,1.00e+00,2114,1057),(910,1.00e+00,910,455),(3472,1.00e+00,3472,1736),(41588,1.00e+00,41588,20794),(5168,1.00e+00,5168,2584),(4830,1.00e+00,4830,2415),(15308,1.00e+00,15308,7654),(77850,1.00e+00,77850,38925),(74486,1.00e+00,74486,37243),(39354,1.00e+00,39354,19677),(2574,1.00e+00,2574,1287),(144,1.00e+00,144,72),(1048,1.00e+00,1048,524),(470,1.00e+00,470,235),(1868,1.00e+00,1868,934),(22180,1.00e+00,22180,11090),(2262,1.00e+00,2262,1131),(1154,1.00e+00,1154,577),(6796,1.00e+00,6796,3398),(28672,1.00e+00,28672,14336),(8052,1.00e+00,8052,4026),(150,1.00e+00,150,75),(1066,1.00e+00,1066,533),(440,1.00e+00,440,220),(1604,1.00e+00,1604,802),(19408,1.00e+00,19408,9704),(2906,1.00e+00,2906,1453),(3676,1.00e+00,3676,1838),(8512,1.00e+00,8512,4256),(4968,1.00e+00,4968,2484),(4968,1.00e+00,4968,2484),(176,1.00e+00,176,88),(200,1.00e+00,200,100),(160,1.00e+00,160,80),(208,1.00e+00,208,104),(198,1.00e+00,198,99),(204,1.00e+00,204,102),(238,1.00e+00,238,119),(206,1.00e+00,206,103),(196,1.00e+00,196,98),(192,1.00e+00,192,96),(230,1.00e+00,230,115),(170,1.00e+00,170,85),(198,1.00e+00,198,99),(184,1.00e+00,184,92),(204,1.00e+00,204,102),(124,1.00e+00,124,62),(102,1.00e+00,102,51),(188,1.00e+00,188,94),(232,1.00e+00,232,116),(172,1.00e+00,172,86),(174,1.00e+00,174,87),(204,1.00e+00,204,102),(206,1.00e+00,206,103),(204,1.00e+00,204,102),(202,1.00e+00,202,101),(196,1.00e+00,196,98),(2476,1.00e+00,2476,1238),(2492,1.00e+00,2492,1246),(92,1.00e+00,92,46),(92,1.00e+00,92,46),(80,1.00e+00,80,40),(104,1.00e+00,104,52),(102,1.00e+00,102,51),(84,1.00e+00,84,42),(118,1.00e+00,118,59),(100,1.00e+00,100,50),(120,1.00e+00,120,60),(92,1.00e+00,92,46),(116,1.00e+00,116,58),(86,1.00e+00,86,43),(94,1.00e+00,94,47),(94,1.00e+00,94,47),(102,1.00e+00,102,51),(60,1.00e+00,60,30),(56,1.00e+00,56,28),(102,1.00e+00,102,51),(114,1.00e+00,114,57),(92,1.00e+00,92,46),(84,1.00e+00,84,42),(114,1.00e+00,114,57),(94,1.00e+00,94,47),(92,1.00e+00,92,46),(108,1.00e+00,108,54),(84,1.00e+00,84,42),(84,1.00e+00,84,42),(108,1.00e+00,108,54),(80,1.00e+00,80,40),(104,1.00e+00,104,52),(96,1.00e+00,96,48),(120,1.00e+00,120,60),(120,1.00e+00,120,60),(106,1.00e+00,106,53),(76,1.00e+00,76,38),(100,1.00e+00,100,50),(114,1.00e+00,114,57),(84,1.00e+00,84,42),(104,1.00e+00,104,52),(90,1.00e+00,90,45),(102,1.00e+00,102,51),(64,1.00e+00,64,32),(46,1.00e+00,46,23),(86,1.00e+00,86,43),(118,1.00e+00,118,59),(80,1.00e+00,80,40),(90,1.00e+00,90,45),(90,1.00e+00,90,45),(112,1.00e+00,112,56),(112,1.00e+00,112,56),(94,1.00e+00,94,47),(112,1.00e+00,112,56),(1708,1.00e+00,1708,854),(1710,1.00e+00,1710,855),(32,1.00e+00,32,16),(48,1.00e+00,48,24),(76,1.00e+00,76,38),(20,1.00e+00,20,10),(54,1.00e+00,54,27),(16,1.00e+00,16,8),(44,1.00e+00,44,22),(20,1.00e+00,20,10),(18,1.00e+00,18,9),(44,1.00e+00,44,22),(22,1.00e+00,22,11),(20,1.00e+00,20,10),(50,1.00e+00,50,25),(40,1.00e+00,40,20),(14,1.00e+00,14,7),(28,1.00e+00,28,14),(84,1.00e+00,84,42),(18,1.00e+00,18,9),(46,1.00e+00,46,23),(14,1.00e+00,14,7),(18,1.00e+00,18,9),(10,1.00e+00,10,5),(20,1.00e+00,20,10),(18,1.00e+00,18,9),(50,1.00e+00,50,25),(46,1.00e+00,46,23),(38,1.00e+00,38,19),(54,1.00e+00,54,27),(42,1.00e+00,42,21),(6,1.00e+00,6,3),(20,1.00e+00,20,10),(20,1.00e+00,20,10),(48,1.00e+00,48,24),(32,1.00e+00,32,16),(20,1.00e+00,20,10),(42,1.00e+00,42,21),(50,1.00e+00,50,25),(22,1.00e+00,22,11),(16,1.00e+00,16,8),(20,1.00e+00,20,10),(16,1.00e+00,16,8),(12,1.00e+00,12,6),(44,1.00e+00,44,22),(70,1.00e+00,70,35),(56,1.00e+00,56,28),(16,1.00e+00,16,8),(588,1.00e+00,588,294),(1120,1.00e+00,1120,560),(20,1.00e+00,20,10),(8,1.00e+00,8,4),(50,1.00e+00,50,25),(2,1.00e+00,2,1),(32,1.00e+00,32,16),(0,0.00e+00,0,0),(14,1.00e+00,14,7),(6,1.00e+00,6,3),(6,1.00e+00,6,3),(8,1.00e+00,8,4),(10,1.00e+00,10,5),(2,1.00e+00,2,1),(14,1.00e+00,14,7),(14,1.00e+00,14,7),(8,1.00e+00,8,4),(16,1.00e+00,16,8),(34,1.00e+00,34,17),(6,1.00e+00,6,3),(0,0.00e+00,0,0),(4,1.00e+00,4,2),(4,1.00e+00,4,2),(2,1.00e+00,2,1),(6,1.00e+00,6,3),(2,1.00e+00,2,1),(18,1.00e+00,18,9),(0,0.00e+00,0,0),(34,1.00e+00,34,17),(24,1.00e+00,24,12),(20,1.00e+00,20,10),(4,1.00e+00,4,2),(12,1.00e+00,12,6),(2,1.00e+00,2,1),(10,1.00e+00,10,5),(0,0.00e+00,0,0),(8,1.00e+00,8,4),(8,1.00e+00,8,4),(14,1.00e+00,14,7),(8,1.00e+00,8,4),(4,1.00e+00,4,2),(6,1.00e+00,6,3),(4,1.00e+00,4,2),(4,1.00e+00,4,2),(8,1.00e+00,8,4),(48,1.00e+00,48,24),(16,1.00e+00,16,8),(6,1.00e+00,6,3),(12,1.00e+00,12,6),(40,1.00e+00,40,20),(26,1.00e+00,26,13),(18,1.00e+00,18,9),(22,1.00e+00,22,11),(16,1.00e+00,16,8),(30,1.00e+00,30,15),(14,1.00e+00,14,7),(12,1.00e+00,12,6),(36,1.00e+00,36,18),(12,1.00e+00,12,6),(18,1.00e+00,18,9),(36,1.00e+00,36,18),(26,1.00e+00,26,13),(6,1.00e+00,6,3),(12,1.00e+00,12,6),(50,1.00e+00,50,25),(12,1.00e+00,12,6),(46,1.00e+00,46,23),(10,1.00e+00,10,5),(14,1.00e+00,14,7),(8,1.00e+00,8,4),(14,1.00e+00,14,7),(16,1.00e+00,16,8),(32,1.00e+00,32,16),(46,1.00e+00,46,23),(4,1.00e+00,4,2),(30,1.00e+00,30,15),(22,1.00e+00,22,11),(2,1.00e+00,2,1),(8,1.00e+00,8,4),(18,1.00e+00,18,9),(38,1.00e+00,38,19),(32,1.00e+00,32,16),(12,1.00e+00,12,6),(34,1.00e+00,34,17),(36,1.00e+00,36,18),(14,1.00e+00,14,7),(12,1.00e+00,12,6),(14,1.00e+00,14,7),(12,1.00e+00,12,6),(8,1.00e+00,8,4),(36,1.00e+00,36,18),(22,1.00e+00,22,11),(40,1.00e+00,40,20),(10,1.00e+00,10,5),(66,1.00e+00,66,33),(20,1.00e+00,20,10),(36,1.00e+00,36,18),(30,1.00e+00,30,15),(4,1.00e+00,4,2),(16,1.00e+00,16,8),(44,1.00e+00,44,22),(22,1.00e+00,22,11),(24,1.00e+00,24,12),(4,1.00e+00,4,2),(2,1.00e+00,2,1),(12,1.00e+00,12,6),(0,0.00e+00,0,0),(44,1.00e+00,44,22),(14,1.00e+00,14,7),(8,1.00e+00,8,4),(4,1.00e+00,4,2),(20,1.00e+00,20,10),(2,1.00e+00,2,1),(2,1.00e+00,2,1),(2,1.00e+00,2,1),(0,0.00e+00,0,0),(0,0.00e+00,0,0),(12,1.00e+00,12,6)]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">68026</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">68026</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">34013</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(9.96e-01,9.94e-01),(9.94e-01,9.91e-01),(9.92e-01,9.89e-01),(9.77e-01,9.68e-01),(9.76e-01,9.67e-01),(9.87e-01,9.81e-01),NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">9.94e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">9.91e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(152336,1.00e+00,152336,76168),(152430,1.00e+00,152430,76215),(68026,1.00e+00,68026,34013),(10626,1.00e+00,10626,5313),(294,1.00e+00,294,147),(2114,1.00e+00,2114,1057),(910,1.00e+00,910,455),(3472,1.00e+00,3472,1736),(41588,1.00e+00,41588,20794),(5168,1.00e+00,5168,2584),(4830,1.00e+00,4830,2415),(15308,1.00e+00,15308,7654),(77850,1.00e+00,77850,38925),(74486,1.00e+00,74486,37243),(39354,1.00e+00,39354,19677),(2574,1.00e+00,2574,1287),(144,1.00e+00,144,72),(1048,1.00e+00,1048,524),(470,1.00e+00,470,235),(1868,1.00e+00,1868,934),(22180,1.00e+00,22180,11090),(2262,1.00e+00,2262,1131),(1154,1.00e+00,1154,577),(6796,1.00e+00,6796,3398),(28672,1.00e+00,28672,14336),(8052,1.00e+00,8052,4026),(150,1.00e+00,150,75),(1066,1.00e+00,1066,533),(440,1.00e+00,440,220),(1604,1.00e+00,1604,802),(19408,1.00e+00,19408,9704),(2906,1.00e+00,2906,1453),(3676,1.00e+00,3676,1838),(8512,1.00e+00,8512,4256)]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">68026</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">68026</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">34013</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(9.96e-01,9.94e-01),(9.94e-01,9.91e-01),(9.92e-01,9.89e-01),(9.77e-01,9.68e-01),(9.76e-01,9.67e-01),(9.87e-01,9.81e-01),NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">9.94e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">9.91e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"nfe"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"genomes"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">{"rs454577"}</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">{}</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NaN</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">6.00e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">179852680</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.30e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.08e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1293,1320,2662506,2788839]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7.19e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5453958</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NaN</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">6.00e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.18e-07</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">179852680</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.30e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.23e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1293,1320,2662506,2788839]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7.19e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5453958</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.77e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NaN</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["ga4gh:VA.az7g1oupeMZJn44CU5WuVLBGNaKl8dYC","ga4gh:VA.v6uv6u8TRlAd-JFt5M5W8DFDhNVqjHYr"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1782274,1782274]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1782275,1782275]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["T","G"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"T/G"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1782275</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"."</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"chr1\t1782275\t.\tT\tG\t.\t.\tGT"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"upstream_gene_variant"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,"promoter",["regulatory_region_variant"],"MODIFIER","ENSR00000344721","G")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"chr1"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1782275</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[(1,NA,"P1","protein_coding",1,"CCDS30565.1",NA,NA,NA,NA,NA,["upstream_gene_variant"],3805,NA,NA,NA,"ENSG00000008130",NA,"NADK","HGNC","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,"NM_023018.5",NA,NA,NA,NA,"ENSP00000341679","Ensembl",-1,"ENST00000341426",2,["O95544-1"],"G"),(1,NA,"P1","protein_coding",NA,"CCDS30565.1",NA,NA,NA,NA,NA,["upstream_gene_variant"],3485,NA,NA,NA,"ENSG00000008130",NA,"NADK","HGNC","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"ENSP00000344340","Ensembl",-1,"ENST00000341991",1,["O95544-1"],"G"),(1,NA,"P1","protein_coding",1,"CCDS34.1",NA,NA,NA,NA,NA,["downstream_gene_variant"],3011,NA,NA,NA,"ENSG00000078369",1,"GNB1","HGNC","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,"NM_002074.5",NA,NA,NA,NA,"ENSP00000367872","Ensembl",-1,"ENST00000378609",1,["P62873-1"],"G"),(1,NA,NA,"protein_coding",NA,"CCDS55562.1",NA,NA,NA,NA,NA,["upstream_gene_variant"],2206,NA,NA,NA,"ENSG00000008130",NA,"NADK","HGNC","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"ENSP00000367890","Ensembl",-1,"ENST00000378625",1,["O95544-2"],"G"),(1,NA,NA,"retained_intron",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3856,NA,NA,NA,"ENSG00000008130",NA,"NADK","HGNC","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",-1,"ENST00000460602",2,NA,"G"),(1,NA,NA,"retained_intron",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3855,NA,NA,NA,"ENSG00000008130",NA,"NADK","HGNC","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",-1,"ENST00000464373",2,NA,"G"),(1,NA,NA,"processed_transcript",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1818,NA,NA,NA,"ENSG00000008130",NA,"NADK","HGNC","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",-1,"ENST00000480542",5,NA,"G"),(1,NA,NA,"processed_transcript",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3856,NA,NA,NA,"ENSG00000008130",NA,"NADK","HGNC","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",-1,"ENST00000492768",3,NA,"G"),(1,NA,NA,"retained_intron",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],2313,NA,NA,NA,"ENSG00000008130",NA,"NADK","HGNC","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"Ensembl",-1,"ENST00000492845",2,NA,"G"),(1,NA,"P1","protein_coding",NA,"CCDS34.1",NA,NA,NA,NA,NA,["downstream_gene_variant"],3010,NA,NA,NA,"ENSG00000078369",1,"GNB1","HGNC","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"ENSP00000481878","Ensembl",-1,"ENST00000610897",5,["P62873-1"],"G"),(1,NA,NA,"protein_coding",NA,"CCDS72685.1",NA,NA,NA,NA,NA,["downstream_gene_variant"],3010,NA,NA,NA,"ENSG00000078369",1,"GNB1","HGNC","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"ENSP00000483532","Ensembl",-1,"ENST00000615252",5,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3459,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"NP_001185922.1","RefSeq",-1,"NM_001198993.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],2244,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"NP_001185923.1","RefSeq",-1,"NM_001198994.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],3011,NA,NA,NA,"2782",NA,"GNB1","EntrezGene","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"NP_001269467.1","RefSeq",-1,"NM_001282538.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],3011,NA,NA,NA,"2782",NA,"GNB1","EntrezGene","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"NP_001269468.1","RefSeq",-1,"NM_001282539.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],2244,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"NP_001340570.1","RefSeq",-1,"NM_001353641.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3805,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"NP_001340571.1","RefSeq",-1,"NM_001353642.2",NA,NA,"G"),(1,NA,NA,"protein_coding",1,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],3011,NA,NA,NA,"2782",NA,"GNB1","EntrezGene","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,"ENST00000378609.9",NA,NA,NA,NA,"NP_002065.1","RefSeq",-1,"NM_002074.5",NA,NA,"G"),(1,NA,NA,"protein_coding",1,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3805,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,"ENST00000341426.9",NA,NA,NA,NA,"NP_075394.3","RefSeq",-1,"NM_023018.5",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],1766,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_006710902.1","RefSeq",-1,"XM_006710839.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3823,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_011540308.1","RefSeq",-1,"XM_011542006.1",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],2132,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_011540309.1","RefSeq",-1,"XM_011542007.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3429,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_011540310.1","RefSeq",-1,"XM_011542008.1",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],2160,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_011540311.1","RefSeq",-1,"XM_011542009.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],3014,NA,NA,NA,"2782",NA,"GNB1","EntrezGene","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_016856548.1","RefSeq",-1,"XM_017001059.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],3017,NA,NA,NA,"2782",NA,"GNB1","EntrezGene","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_016856549.1","RefSeq",-1,"XM_017001060.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],3017,NA,NA,NA,"2782",NA,"GNB1","EntrezGene","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_016856550.1","RefSeq",-1,"XM_017001061.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],2132,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_016857632.1","RefSeq",-1,"XM_017002143.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3837,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_016857634.1","RefSeq",-1,"XM_017002145.2",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3508,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_016857635.1","RefSeq",-1,"XM_017002146.1",NA,NA,"G"),(1,NA,NA,"protein_coding",NA,NA,NA,NA,NA,NA,NA,["downstream_gene_variant"],3015,NA,NA,NA,"2782",NA,"GNB1","EntrezGene","HGNC:4396",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"XP_024302263.1","RefSeq",-1,"XM_024446495.1",NA,NA,"G"),(1,NA,NA,"misc_RNA",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],2132,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"RefSeq",-1,"XR_001737371.2",NA,NA,"G"),(1,NA,NA,"misc_RNA",NA,NA,NA,NA,NA,NA,NA,["upstream_gene_variant"],3823,NA,NA,NA,"65220",NA,"NADK","EntrezGene","HGNC:29831",NA,NA,NA,"MODIFIER",NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,"RefSeq",-1,"XR_946747.2",NA,NA,"G")]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"SNV"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.77e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"AS_MQ"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"snv"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">"snv"</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,5,13,138,329,289,858,1515,1238,2617,3630,2530,4464,5386,3494,5254,44349]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,653,3411,8477,13129,14278,13314,10144,6504,3452,1550,675,265,117,63,29,17,10,8]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">13</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,5,13,138,329,289,858,1515,1238,2617,3630,2530,4464,5386,3494,5254,44349]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,653,3411,8477,13129,14278,13314,10144,6504,3452,1550,675,265,117,63,29,17,10,8]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">13</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,4.00e-01,4.50e-01,5.00e-01,5.50e-01,6.00e-01,6.50e-01,7.00e-01,7.50e-01,8.00e-01,8.50e-01,9.00e-01,9.50e-01,1.00e+00]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1,2,2,8,23,29,138,329,289,858,1515,1238,2617,3630,2530,4464,5386,3494,5254,44349]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3,38,654,3415,8477,13130,14278,13314,10144,6504,3452,1550,675,265,117,63,29,17,10,8]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">13</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1,2,2,8,23,29,138,329,289,858,1515,1238,2617,3630,2530,4464,5386,3494,5254,44349]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01,8.50e+01,9.00e+01,9.50e+01,1.00e+02]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3,38,654,3415,8477,13130,14278,13314,10144,6504,3452,1550,675,265,117,63,29,17,10,8]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">13</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,4.00e-01,4.50e-01,5.00e-01,5.50e-01,6.00e-01,6.50e-01,7.00e-01,7.50e-01,8.00e-01,8.50e-01,9.00e-01,9.50e-01,1.00e+00]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[0,0,0,0,0,0,0,0,0,0]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,7.00e+01,7.50e+01,8.00e+01]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1428,1601,1904,3225,4570,3920,3653,3194,2150,1282]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3755</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">454</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">2.59e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.52e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">-7.42e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td></tr>\n", | |
"</tbody></table>" | |
], | |
"text/plain": [ | |
"+---------------+------------+\n", | |
"| locus | alleles |\n", | |
"+---------------+------------+\n", | |
"| locus<GRCh38> | array<str> |\n", | |
"+---------------+------------+\n", | |
"| chr1:1782275 | [\"T\",\"G\"] |\n", | |
"+---------------+------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{AC: int32, AF: float64, AN: int32, homozygote_count: int32}> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(152336,1.00e+00,152336,76168),(152430,1.00e+00,152430,76215),(68026,1.0... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-----------+-----------+-----------+-------------------------+----------------+\n", | |
"| grpmax.AC | grpmax.AF | grpmax.AN | grpmax.homozygote_count | grpmax.gen_anc |\n", | |
"+-----------+-----------+-----------+-------------------------+----------------+\n", | |
"| int32 | float64 | int32 | int32 | str |\n", | |
"+-----------+-----------+-----------+-------------------------+----------------+\n", | |
"| 68026 | 1.00e+00 | 68026 | 34013 | \"nfe\" |\n", | |
"+-----------+-----------+-----------+-------------------------+----------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| faf |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{faf95: float64, faf99: float64}> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(9.96e-01,9.94e-01),(9.94e-01,9.91e-01),(9.92e-01,9.89e-01),(9.77e-01,9.... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------+--------------------------+------------------+\n", | |
"| fafmax.faf95_max | fafmax.faf95_max_gen_anc | fafmax.faf99_max |\n", | |
"+------------------+--------------------------+------------------+\n", | |
"| float64 | str | float64 |\n", | |
"+------------------+--------------------------+------------------+\n", | |
"| 9.94e-01 | \"nfe\" | 9.91e-01 |\n", | |
"+------------------+--------------------------+------------------+\n", | |
"\n", | |
"+--------------------------+\n", | |
"| fafmax.faf99_max_gen_anc |\n", | |
"+--------------------------+\n", | |
"| str |\n", | |
"+--------------------------+\n", | |
"| \"nfe\" |\n", | |
"+--------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| joint_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{AC: int32, AF: float64, AN: int32, homozygote_count: int32}> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(152336,1.00e+00,152336,76168),(152430,1.00e+00,152430,76215),(68026,1.0... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-----------------+-----------------+-----------------+\n", | |
"| joint_grpmax.AC | joint_grpmax.AF | joint_grpmax.AN |\n", | |
"+-----------------+-----------------+-----------------+\n", | |
"| int32 | float64 | int32 |\n", | |
"+-----------------+-----------------+-----------------+\n", | |
"| 68026 | 1.00e+00 | 68026 |\n", | |
"+-----------------+-----------------+-----------------+\n", | |
"\n", | |
"+-------------------------------+----------------------+\n", | |
"| joint_grpmax.homozygote_count | joint_grpmax.gen_anc |\n", | |
"+-------------------------------+----------------------+\n", | |
"| int32 | str |\n", | |
"+-------------------------------+----------------------+\n", | |
"| 34013 | \"nfe\" |\n", | |
"+-------------------------------+----------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| joint_faf |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{faf95: float64, faf99: float64}> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(9.96e-01,9.94e-01),(9.94e-01,9.91e-01),(9.92e-01,9.89e-01),(9.77e-01,9.... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------+--------------------------------+\n", | |
"| joint_fafmax.faf95_max | joint_fafmax.faf95_max_gen_anc |\n", | |
"+------------------------+--------------------------------+\n", | |
"| float64 | str |\n", | |
"+------------------------+--------------------------------+\n", | |
"| 9.94e-01 | \"nfe\" |\n", | |
"+------------------------+--------------------------------+\n", | |
"\n", | |
"+------------------------+--------------------------------+\n", | |
"| joint_fafmax.faf99_max | joint_fafmax.faf99_max_gen_anc |\n", | |
"+------------------------+--------------------------------+\n", | |
"| float64 | str |\n", | |
"+------------------------+--------------------------------+\n", | |
"| 9.91e-01 | \"nfe\" |\n", | |
"+------------------------+--------------------------------+\n", | |
"\n", | |
"+-------------------------------------+---------+-----------+--------------+\n", | |
"| joint_fafmax.joint_fafmax_data_type | a_index | was_split | rsid |\n", | |
"+-------------------------------------+---------+-----------+--------------+\n", | |
"| str | int32 | bool | set<str> |\n", | |
"+-------------------------------------+---------+-----------+--------------+\n", | |
"| \"genomes\" | 1 | False | {\"rs454577\"} |\n", | |
"+-------------------------------------+---------+-----------+--------------+\n", | |
"\n", | |
"+----------+---------+----------+----------------+-----------------+----------+\n", | |
"| filters | info.FS | info.MQ | info.MQRankSum | info.QUALapprox | info.QD |\n", | |
"+----------+---------+----------+----------------+-----------------+----------+\n", | |
"| set<str> | float64 | float64 | float64 | int64 | float32 |\n", | |
"+----------+---------+----------+----------------+-----------------+----------+\n", | |
"| {} | NaN | 6.00e+01 | 0.00e+00 | 179852680 | 3.30e+01 |\n", | |
"+----------+---------+----------+----------------+-----------------+----------+\n", | |
"\n", | |
"+---------------------+-----------------------------+----------+------------+\n", | |
"| info.ReadPosRankSum | info.SB | info.SOR | info.VarDP |\n", | |
"+---------------------+-----------------------------+----------+------------+\n", | |
"| float64 | array<int32> | float64 | int32 |\n", | |
"+---------------------+-----------------------------+----------+------------+\n", | |
"| 4.08e-01 | [1293,1320,2662506,2788839] | 7.19e-01 | 5453958 |\n", | |
"+---------------------+-----------------------------+----------+------------+\n", | |
"\n", | |
"+------------+------------+-------------------+-----------------+\n", | |
"| info.AS_FS | info.AS_MQ | info.AS_MQRankSum | info.AS_pab_max |\n", | |
"+------------+------------+-------------------+-----------------+\n", | |
"| float64 | float64 | float64 | float64 |\n", | |
"+------------+------------+-------------------+-----------------+\n", | |
"| NaN | 6.00e+01 | 0.00e+00 | 4.18e-07 |\n", | |
"+------------+------------+-------------------+-----------------+\n", | |
"\n", | |
"+--------------------+------------+------------------------+\n", | |
"| info.AS_QUALapprox | info.AS_QD | info.AS_ReadPosRankSum |\n", | |
"+--------------------+------------+------------------------+\n", | |
"| int64 | float32 | float64 |\n", | |
"+--------------------+------------+------------------------+\n", | |
"| 179852680 | 3.30e+01 | 4.23e-01 |\n", | |
"+--------------------+------------+------------------------+\n", | |
"\n", | |
"+-----------------------------+-------------+---------------+----------------+\n", | |
"| info.AS_SB_TABLE | info.AS_SOR | info.AS_VarDP | info.singleton |\n", | |
"+-----------------------------+-------------+---------------+----------------+\n", | |
"| array<int32> | float64 | int32 | bool |\n", | |
"+-----------------------------+-------------+---------------+----------------+\n", | |
"| [1293,1320,2662506,2788839] | 7.19e-01 | 5453958 | False |\n", | |
"+-----------------------------+-------------+---------------+----------------+\n", | |
"\n", | |
"+----------------------------+-----------+------------+------------------+\n", | |
"| info.transmitted_singleton | info.omni | info.mills | info.monoallelic |\n", | |
"+----------------------------+-----------+------------+------------------+\n", | |
"| bool | bool | bool | bool |\n", | |
"+----------------------------+-----------+------------+------------------+\n", | |
"| NA | NA | NA | True |\n", | |
"+----------------------------+-----------+------------+------------------+\n", | |
"\n", | |
"+---------------+----------------+-----------------------+\n", | |
"| info.only_het | info.AS_VQSLOD | info.inbreeding_coeff |\n", | |
"+---------------+----------------+-----------------------+\n", | |
"| bool | float64 | float64 |\n", | |
"+---------------+----------------+-----------------------+\n", | |
"| False | 1.77e+01 | NaN |\n", | |
"+---------------+----------------+-----------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| info.vrs.VRS_Allele_IDs |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<str> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [\"ga4gh:VA.az7g1oupeMZJn44CU5WuVLBGNaKl8dYC\",\"ga4gh:VA.v6uv6u8TRlAd-JFt5M... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"| info.vrs.VRS_Starts | info.vrs.VRS_Ends | info.vrs.VRS_States |\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"| array<int32> | array<int32> | array<str> |\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"| [1782274,1782274] | [1782275,1782275] | [\"T\",\"G\"] |\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"\n", | |
"+-------------------+---------+--------+-----------------------------+\n", | |
"| vep.allele_string | vep.end | vep.id | vep.input |\n", | |
"+-------------------+---------+--------+-----------------------------+\n", | |
"| str | int32 | str | str |\n", | |
"+-------------------+---------+--------+-----------------------------+\n", | |
"| \"T/G\" | 1782275 | \".\" | \"chr1\t1782275\t.\tT\tG\t.\t.\tGT\" |\n", | |
"+-------------------+---------+--------+-----------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| vep.intergenic_consequences |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{allele_num: int32, consequence_terms: array<str>, impact: st... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| NA |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-----------------------------+\n", | |
"| vep.most_severe_consequence |\n", | |
"+-----------------------------+\n", | |
"| str |\n", | |
"+-----------------------------+\n", | |
"| \"upstream_gene_variant\" |\n", | |
"+-----------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| vep.motif_feature_consequences |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{allele_num: int32, consequence_terms: array<str>, high_inf_p... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| NA |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| vep.regulatory_feature_consequences |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{allele_num: int32, biotype: str, consequence_terms: array<st... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(1,\"promoter\",[\"regulatory_region_variant\"],\"MODIFIER\",\"ENSR00000344721\"... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------+-----------+------------+\n", | |
"| vep.seq_region_name | vep.start | vep.strand |\n", | |
"+---------------------+-----------+------------+\n", | |
"| str | int32 | int32 |\n", | |
"+---------------------+-----------+------------+\n", | |
"| \"chr1\" | 1782275 | 1 |\n", | |
"+---------------------+-----------+------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| vep.transcript_consequences |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<struct{allele_num: int32, amino_acids: str, appris: str, biotype: s... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [(1,NA,\"P1\",\"protein_coding\",1,\"CCDS30565.1\",NA,NA,NA,NA,NA,[\"upstream_ge... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------+------------------------+-------------------------+\n", | |
"| vep.variant_class | vqsr_results.AS_VQSLOD | vqsr_results.AS_culprit |\n", | |
"+-------------------+------------------------+-------------------------+\n", | |
"| str | float64 | str |\n", | |
"+-------------------+------------------------+-------------------------+\n", | |
"| \"SNV\" | 1.77e+01 | \"AS_MQ\" |\n", | |
"+-------------------+------------------------+-------------------------+\n", | |
"\n", | |
"+----------------------------------+----------------------------------+\n", | |
"| vqsr_results.positive_train_site | vqsr_results.negative_train_site |\n", | |
"+----------------------------------+----------------------------------+\n", | |
"| bool | bool |\n", | |
"+----------------------------------+----------------------------------+\n", | |
"| False | False |\n", | |
"+----------------------------------+----------------------------------+\n", | |
"\n", | |
"+----------------------+------------------+---------------------+\n", | |
"| region_flags.non_par | region_flags.lcr | region_flags.segdup |\n", | |
"+----------------------+------------------+---------------------+\n", | |
"| bool | bool | bool |\n", | |
"+----------------------+------------------+---------------------+\n", | |
"| False | False | False |\n", | |
"+----------------------+------------------+---------------------+\n", | |
"\n", | |
"+-------------------------+---------------------------+\n", | |
"| allele_info.allele_type | allele_info.n_alt_alleles |\n", | |
"+-------------------------+---------------------------+\n", | |
"| str | int32 |\n", | |
"+-------------------------+---------------------------+\n", | |
"| \"snv\" | 1 |\n", | |
"+-------------------------+---------------------------+\n", | |
"\n", | |
"+--------------------------+-----------------------+\n", | |
"| allele_info.variant_type | allele_info.was_mixed |\n", | |
"+--------------------------+-----------------------+\n", | |
"| str | bool |\n", | |
"+--------------------------+-----------------------+\n", | |
"| \"snv\" | False |\n", | |
"+--------------------------+-----------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_all.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_all.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0,0,0,0,5,13,138,329,289,858,1515,1238,2617,3630,2530,4464,5386,3494,525... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_all.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_all.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 0 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_all.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_all.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0,0,653,3411,8477,13129,14278,13314,10144,6504,3452,1550,675,265,117,63,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_all.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_all.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 13 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_alt.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0,0,0,0,5,13,138,329,289,858,1515,1238,2617,3630,2530,4464,5386,3494,525... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_alt.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.gq_hist_alt.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 0 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_alt.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0,0,653,3411,8477,13129,14278,13314,10144,6504,3452,1550,675,265,117,63,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_alt.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.dp_hist_alt.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 13 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.qual_hists.ab_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.ab_hist_alt.bin_freq |\n", | |
"+--------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+--------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.qual_hists.ab_hist_alt.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.qual_hists.ab_hist_alt.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 0 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_all.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_all.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [1,2,2,8,23,29,138,329,289,858,1515,1238,2617,3630,2530,4464,5386,3494,52... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_all.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_all.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 0 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_all.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_all.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [3,38,654,3415,8477,13130,14278,13314,10144,6504,3452,1550,675,265,117,63... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_all.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_all.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 13 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_alt.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [1,2,2,8,23,29,138,329,289,858,1515,1238,2617,3630,2530,4464,5386,3494,52... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_alt.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.gq_hist_alt.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 0 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e+00,1.00e+01,1.50e+01,2.00e+01,2.50e+01,3.00e+01,3.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_alt.bin_freq |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [3,38,654,3415,8477,13130,14278,13314,10144,6504,3452,1550,675,265,117,63... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_alt.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.dp_hist_alt.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 13 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.ab_hist_alt.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [0.00e+00,5.00e-02,1.00e-01,1.50e-01,2.00e-01,2.50e-01,3.00e-01,3.50e-01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.ab_hist_alt.bin_freq |\n", | |
"+------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+------------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0] |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+-------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.ab_hist_alt.n_smaller |\n", | |
"+-------------------------------------------------+\n", | |
"| int64 |\n", | |
"+-------------------------------------------------+\n", | |
"| 0 |\n", | |
"+-------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------+\n", | |
"| histograms.raw_qual_hists.ab_hist_alt.n_larger |\n", | |
"+------------------------------------------------+\n", | |
"| int64 |\n", | |
"+------------------------------------------------+\n", | |
"| 0 |\n", | |
"+------------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_het.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_het.bin_freq |\n", | |
"+--------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+--------------------------------------------+\n", | |
"| [0,0,0,0,0,0,0,0,0,0] |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_het.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 0 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_het.n_larger |\n", | |
"+--------------------------------------------+\n", | |
"| int64 |\n", | |
"+--------------------------------------------+\n", | |
"| 0 |\n", | |
"+--------------------------------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_hom.bin_edges |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<float64> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [3.00e+01,3.50e+01,4.00e+01,4.50e+01,5.00e+01,5.50e+01,6.00e+01,6.50e+01,... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+-----------------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_hom.bin_freq |\n", | |
"+-----------------------------------------------------+\n", | |
"| array<int64> |\n", | |
"+-----------------------------------------------------+\n", | |
"| [1428,1601,1904,3225,4570,3920,3653,3194,2150,1282] |\n", | |
"+-----------------------------------------------------+\n", | |
"\n", | |
"+---------------------------------------------+\n", | |
"| histograms.age_hists.age_hist_hom.n_smaller |\n", | |
"+---------------------------------------------+\n", | |
"| int64 |\n", | |
"+---------------------------------------------+\n", | |
"| 3755 |\n", | |
"+---------------------------------------------+\n", | |
"\n", | |
"+--------------------------------------------+---------------------------------+\n", | |
"| histograms.age_hists.age_hist_hom.n_larger | in_silico_predictors.cadd.phred |\n", | |
"+--------------------------------------------+---------------------------------+\n", | |
"| int64 | float32 |\n", | |
"+--------------------------------------------+---------------------------------+\n", | |
"| 454 | 2.59e+00 |\n", | |
"+--------------------------------------------+---------------------------------+\n", | |
"\n", | |
"+-------------------------------------+--------------------------------+\n", | |
"| in_silico_predictors.cadd.raw_score | in_silico_predictors.revel_max |\n", | |
"+-------------------------------------+--------------------------------+\n", | |
"| float32 | float64 |\n", | |
"+-------------------------------------+--------------------------------+\n", | |
"| 1.52e-01 | NA |\n", | |
"+-------------------------------------+--------------------------------+\n", | |
"\n", | |
"+--------------------------------------+\n", | |
"| in_silico_predictors.spliceai_ds_max |\n", | |
"+--------------------------------------+\n", | |
"| float32 |\n", | |
"+--------------------------------------+\n", | |
"| NA |\n", | |
"+--------------------------------------+\n", | |
"\n", | |
"+------------------------------------------+-----------------------------+\n", | |
"| in_silico_predictors.pangolin_largest_ds | in_silico_predictors.phylop |\n", | |
"+------------------------------------------+-----------------------------+\n", | |
"| float64 | float64 |\n", | |
"+------------------------------------------+-----------------------------+\n", | |
"| NA | -7.42e-01 |\n", | |
"+------------------------------------------+-----------------------------+\n", | |
"\n", | |
"+-------------------------------+-----------------------------------+\n", | |
"| in_silico_predictors.sift_max | in_silico_predictors.polyphen_max |\n", | |
"+-------------------------------+-----------------------------------+\n", | |
"| float64 | float64 |\n", | |
"+-------------------------------+-----------------------------------+\n", | |
"| NA | NA |\n", | |
"+-------------------------------+-----------------------------------+" | |
] | |
}, | |
"metadata": {}, | |
"output_type": "display_data" | |
} | |
], | |
"source": [ | |
"# Monoallelic example\n", | |
"# chr1:1782275\t[\"T\",\"G\"]\n", | |
"\n", | |
"ht_mono = ht.filter(ht.locus == hl.locus(\"chr1\", 1782275, reference_genome=\"GRCh38\"))\n", | |
"ht_mono.show()" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 7, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"[Stage 6:> (0 + 1) / 1]\r" | |
] | |
} | |
], | |
"source": [ | |
"annotations_monoallelic = gnomad_gks(\n", | |
" locus_interval=hl.interval(\n", | |
" hl.locus(\"chr1\", 1782275, reference_genome=\"GRCh38\"),\n", | |
" hl.locus(\"chr1\", 1782275 + 1, reference_genome=\"GRCh38\"),\n", | |
" ),\n", | |
" version=\"4.1\",\n", | |
" data_type=\"genomes\",\n", | |
" custom_ht=ht_mono,\n", | |
")" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 8, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"True\n" | |
] | |
} | |
], | |
"source": [ | |
"for a in annotations_monoallelic:\n", | |
" print(a[\"gks_va_freq\"][\"qualityMeasures\"][\"monoallelic\"])" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 12, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/html": [ | |
"<table><thead><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"31\"><div style=\"text-align: left;\"></div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"31\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">info</div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"4\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">vrs</div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">locus</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">alleles</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">FS</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">MQ</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">MQRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">QUALapprox</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">QD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">ReadPosRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">SB</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">SOR</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VarDP</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_FS</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_MQ</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_MQRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_pab_max</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_QUALapprox</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_QD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_ReadPosRankSum</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_SB_TABLE</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_SOR</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_VarDP</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">singleton</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">transmitted_singleton</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">omni</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">mills</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">monoallelic</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">only_het</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">AS_VQSLOD</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">inbreeding_coeff</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_Allele_IDs</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_Starts</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_Ends</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">VRS_States</div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">locus<GRCh38></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">int32</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">float64</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<int32></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td></tr>\n", | |
"</thead><tbody><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">chr1:1782275</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["T","G"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NaN</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">6.00e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">179852680</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.30e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.08e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1293,1320,2662506,2788839]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7.19e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5453958</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NaN</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">6.00e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">0.00e+00</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.18e-07</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">179852680</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">3.30e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">4.23e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1293,1320,2662506,2788839]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">7.19e-01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">5453958</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NA</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">False</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">1.77e+01</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">NaN</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["ga4gh:VA.az7g1oupeMZJn44CU5WuVLBGNaKl8dYC","ga4gh:VA.v6uv6u8TRlAd-JFt5M5W8DFDhNVqjHYr"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1782274,1782274]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">[1782275,1782275]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["T","G"]</td></tr>\n", | |
"</tbody></table>" | |
], | |
"text/plain": [ | |
"+---------------+------------+---------+----------+----------------+\n", | |
"| locus | alleles | info.FS | info.MQ | info.MQRankSum |\n", | |
"+---------------+------------+---------+----------+----------------+\n", | |
"| locus<GRCh38> | array<str> | float64 | float64 | float64 |\n", | |
"+---------------+------------+---------+----------+----------------+\n", | |
"| chr1:1782275 | [\"T\",\"G\"] | NaN | 6.00e+01 | 0.00e+00 |\n", | |
"+---------------+------------+---------+----------+----------------+\n", | |
"\n", | |
"+-----------------+----------+---------------------+\n", | |
"| info.QUALapprox | info.QD | info.ReadPosRankSum |\n", | |
"+-----------------+----------+---------------------+\n", | |
"| int64 | float32 | float64 |\n", | |
"+-----------------+----------+---------------------+\n", | |
"| 179852680 | 3.30e+01 | 4.08e-01 |\n", | |
"+-----------------+----------+---------------------+\n", | |
"\n", | |
"+-----------------------------+----------+------------+------------+\n", | |
"| info.SB | info.SOR | info.VarDP | info.AS_FS |\n", | |
"+-----------------------------+----------+------------+------------+\n", | |
"| array<int32> | float64 | int32 | float64 |\n", | |
"+-----------------------------+----------+------------+------------+\n", | |
"| [1293,1320,2662506,2788839] | 7.19e-01 | 5453958 | NaN |\n", | |
"+-----------------------------+----------+------------+------------+\n", | |
"\n", | |
"+------------+-------------------+-----------------+--------------------+\n", | |
"| info.AS_MQ | info.AS_MQRankSum | info.AS_pab_max | info.AS_QUALapprox |\n", | |
"+------------+-------------------+-----------------+--------------------+\n", | |
"| float64 | float64 | float64 | int64 |\n", | |
"+------------+-------------------+-----------------+--------------------+\n", | |
"| 6.00e+01 | 0.00e+00 | 4.18e-07 | 179852680 |\n", | |
"+------------+-------------------+-----------------+--------------------+\n", | |
"\n", | |
"+------------+------------------------+-----------------------------+\n", | |
"| info.AS_QD | info.AS_ReadPosRankSum | info.AS_SB_TABLE |\n", | |
"+------------+------------------------+-----------------------------+\n", | |
"| float32 | float64 | array<int32> |\n", | |
"+------------+------------------------+-----------------------------+\n", | |
"| 3.30e+01 | 4.23e-01 | [1293,1320,2662506,2788839] |\n", | |
"+------------+------------------------+-----------------------------+\n", | |
"\n", | |
"+-------------+---------------+----------------+----------------------------+\n", | |
"| info.AS_SOR | info.AS_VarDP | info.singleton | info.transmitted_singleton |\n", | |
"+-------------+---------------+----------------+----------------------------+\n", | |
"| float64 | int32 | bool | bool |\n", | |
"+-------------+---------------+----------------+----------------------------+\n", | |
"| 7.19e-01 | 5453958 | False | NA |\n", | |
"+-------------+---------------+----------------+----------------------------+\n", | |
"\n", | |
"+-----------+------------+------------------+---------------+----------------+\n", | |
"| info.omni | info.mills | info.monoallelic | info.only_het | info.AS_VQSLOD |\n", | |
"+-----------+------------+------------------+---------------+----------------+\n", | |
"| bool | bool | bool | bool | float64 |\n", | |
"+-----------+------------+------------------+---------------+----------------+\n", | |
"| NA | NA | True | False | 1.77e+01 |\n", | |
"+-----------+------------+------------------+---------------+----------------+\n", | |
"\n", | |
"+-----------------------+\n", | |
"| info.inbreeding_coeff |\n", | |
"+-----------------------+\n", | |
"| float64 |\n", | |
"+-----------------------+\n", | |
"| NaN |\n", | |
"+-----------------------+\n", | |
"\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| info.vrs.VRS_Allele_IDs |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| array<str> |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"| [\"ga4gh:VA.az7g1oupeMZJn44CU5WuVLBGNaKl8dYC\",\"ga4gh:VA.v6uv6u8TRlAd-JFt5M... |\n", | |
"+------------------------------------------------------------------------------+\n", | |
"\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"| info.vrs.VRS_Starts | info.vrs.VRS_Ends | info.vrs.VRS_States |\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"| array<int32> | array<int32> | array<str> |\n", | |
"+---------------------+-------------------+---------------------+\n", | |
"| [1782274,1782274] | [1782275,1782275] | [\"T\",\"G\"] |\n", | |
"+---------------------+-------------------+---------------------+" | |
] | |
}, | |
"metadata": {}, | |
"output_type": "display_data" | |
}, | |
{ | |
"name": "stderr", | |
"output_type": "stream", | |
"text": [ | |
"[Stage 17:> (0 + 1) / 1]\r" | |
] | |
}, | |
{ | |
"data": { | |
"text/html": [ | |
"<table><thead><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;\"></div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">locus</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\">alleles</div></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \" colspan=\"1\"><div style=\"text-align: left;border-bottom: solid 2px #000; padding-bottom: 5px\"><expr></div></td></tr><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">locus<GRCh38></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">array<str></td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; text-align: left;\">bool</td></tr>\n", | |
"</thead><tbody><tr><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">chr1:1782275</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">["T","G"]</td><td style=\"white-space: nowrap; max-width: 500px; overflow: hidden; text-overflow: ellipsis; \">True</td></tr>\n", | |
"</tbody></table>" | |
], | |
"text/plain": [ | |
"+---------------+------------+--------+\n", | |
"| locus | alleles | <expr> |\n", | |
"+---------------+------------+--------+\n", | |
"| locus<GRCh38> | array<str> | bool |\n", | |
"+---------------+------------+--------+\n", | |
"| chr1:1782275 | [\"T\",\"G\"] | True |\n", | |
"+---------------+------------+--------+" | |
] | |
}, | |
"metadata": {}, | |
"output_type": "display_data" | |
} | |
], | |
"source": [ | |
"# Gnomad 4.1 example. Can't use gnomad_gks since some columns don't match\n", | |
"ht_url_4_1 = (\n", | |
" \"gs://gcp-public-data--gnomad/release/4.1/ht/genomes/gnomad.genomes.v4.1.sites.ht/\"\n", | |
")\n", | |
"\n", | |
"ht_4_1 = hl.read_table(ht_url_4_1)\n", | |
"\n", | |
"ht_mono_4_1 = ht.filter(\n", | |
" ht.locus == hl.locus(\"chr1\", 1782275, reference_genome=\"GRCh38\")\n", | |
")\n", | |
"ht_mono_4_1.info.show()\n", | |
"ht_mono_4_1.info.monoallelic.show()" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [] | |
} | |
], | |
"metadata": { | |
"kernelspec": { | |
"display_name": "venv", | |
"language": "python", | |
"name": "python3" | |
}, | |
"language_info": { | |
"codemirror_mode": { | |
"name": "ipython", | |
"version": 3 | |
}, | |
"file_extension": ".py", | |
"mimetype": "text/x-python", | |
"name": "python", | |
"nbconvert_exporter": "python", | |
"pygments_lexer": "ipython3", | |
"version": "3.12.4" | |
} | |
}, | |
"nbformat": 4, | |
"nbformat_minor": 2 | |
} |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment