| #!/usr/bin/env python | |
| # | |
| # Copyright (C) 2018 Vanessa Sochat. | |
| # | |
| # This program is free software: you can redistribute it and/or modify it | |
| # under the terms of the GNU Affero General Public License as published by | |
| # the Free Software Foundation, either version 3 of the License, or (at your | |
| # option) any later version. | |
| # | |
| # This program is distributed in the hope that it will be useful, but WITHOUT |
Given a string you need to print the size of the longest possible substring that has exactly k unique characters. If there is no possible substring print -1.
For the string aabacbebebe and k = 3 the substring will be cbebebe with length 7.
Specifically, there are three unique characters (c, b, and e) and they create a substring of length 7.
| Bootstrap: docker | |
| From: nipype/nipype:latest | |
| # This is the adjusted (fixed) build recipe for the issue above. | |
| # sudo singularity build swist Singularity.swist | |
| %labels | |
| Maintainer Natalia | |
| Version v1.0 |
Hey friends! I'll add some notes here to follow up on the docs discussion we had earlier (I know you guys are at lunch, no worries!) I think we would do very well to do the following:
Github is really a strong base for current and future development. It will support integration with just about anything, involve users, and have version control and immedate rendering to nice webby places. So it follows that you can think of a documentation base as a Github repo.
Imagine some theoretical stanford-rc/lessons repo where we start adding content.
| # Tutorial https://bitbucket.org/biobakery/biobakery/wiki/strainphlan#rst-header-how-to-run | |
| # Dockerfiles (container guts) | |
| # https://bitbucket.org/biobakery/biobakery/src/5580bf5ec589732246f15391b1b897eb79786091/docker/strainphlan/Dockerfile?at=default&fileviewer=file-view-default | |
| # https://bitbucket.org/biobakery/biobakery/src/5580bf5ec589732246f15391b1b897eb79786091/docker/base/Dockerfile?at=default&fileviewer=file-view-default | |
| # Load an interactive node | |
| sdev | |
| # Load singularity, ensure cache is on scratch |
| Bootstrap: docker | |
| From: vanessa/scif | |
| # sudo singularity build color.simg Singularity | |
| # ./color.simg shell color | |
| %post | |
| echo "%appenv color | |
| export SHELL=/bin/bash |
| Bootstrap: docker | |
| From: centos:7 | |
| %help | |
| This is a container to run AMREX binarie on SKL machine. just type ./amrex.img and it should run | |
| %post | |
| yum install -y wget | |
| wget https://github.com/Smahane/Intel-HPC-Container/blob/master/containers/amrex/Nyx3d.intel.MPI.OMP.SKLAVX512.ex | |
| wget https://github.com/Smahane/Intel-HPC-Container/blob/master/containers/amrex/inputs |
| # Note this is with current branch fix/gcr.io of singularityhub/sregistry-cli | |
| # will be released as pypi 0.0.73 soon :) | |
| $ sregistry pull docker://gcr.io/deepvariant-docker/deepvariant:0.5.0 | |
| [client|docker] [database|sqlite:////home/vanessa/.singularity/sregistry.db] | |
| Exploding /usr/local/libexec/singularity/bootstrap-scripts/environment.tar | |
| Exploding /home/vanessa/.singularity/docker/sha256:1be7f2b886e89a58e59c4e685fcc5905a26ddef3201f290b96f1eff7d778e122.tar.gz | |
| Exploding /home/vanessa/.singularity/docker/sha256:6fbc4a21b806838b63b774b338c6ad19d696a9e655f50b4e358cc4006c3baa79.tar.gz | |
| Exploding /home/vanessa/.singularity/docker/sha256:c71a6f8e13782fed125f2247931c3eb20cc0e6428a5d79edb546f1f1405f0e49.tar.gz | |
| Exploding /home/vanessa/.singularity/docker/sha256:4be3072e5a37392e32f632bb234c0b461ff5675ab7e362afad6359fbd36884af.tar.gz | |
| Exploding /home/vanessa/.singularity/docker/sha256:06c6d2f5970057aef3aef6da60f0fde280db1c077f0cd88ca33ec1a70a9c7b58.tar.gz |
| { | |
| "config":{ | |
| "AttachStdin":false, | |
| "Cmd":[ | |
| "/bin/bash" | |
| ], | |
| "Volumes":null, | |
| "Image":"sha256:9d30e8ce67321c61be656426c99dc22c6a8be8f1f03a3adcf8e0dd7d08281ed3", | |
| "Tty":false, | |
| "StdinOnce":false, |
| docker inspect gcr.io/deepvariant-docker/deepvariant:0.5.0 | |
| [ | |
| { | |
| "Id": "sha256:c0acf3d54dce5eabf6ae422593a3d266e1d5d61129d53f32ec943d133b395a6c", | |
| "RepoTags": [ | |
| "gcr.io/deepvariant-docker/deepvariant:0.5.0" | |
| ], | |
| "RepoDigests": [ | |
| "gcr.io/deepvariant-docker/deepvariant@sha256:c95f3eba028ad8e3fe3fb4fd6fcc6ba0cd27ff14139c79bba2a9d4acc5a2591c" | |
| ], |