webbedfeet’s gists

webbedfeet / lowpass.py

Created November 22, 2019 05:14 — forked from junzis/lowpass.py

Python Lowpass Filter

	# https://stackoverflow.com/questions/25191620/
	# creating-lowpass-filter-in-scipy-understanding-methods-and-units

	import numpy as np
	from scipy.signal import butter, lfilter, freqz
	from matplotlib import pyplot as plt


	def butter_lowpass(cutoff, fs, order=5):
	nyq = 0.5 * fs

webbedfeet / Supplement_06.R

Last active October 29, 2019 19:04

	#' ---
	#' title: An annotated R script for Homework 6 using lists and maps
	#' output: html_document
	#' ---
	#'
	#+, include=FALSE
	knitr::opts_chunk$set(error=F, warning=F, message=F)
	#' First, read the data in. We've stored just the data files in the folder `data/HW6`.

	library(tidyverse)

webbedfeet / sqlite2csv.sh

Created September 24, 2019 14:08

Reminder of shell script to convert a table from SQLite to a csv file

	#!/user/bin/bash

	sqlite3 -header -csv MyDB.sqlite3 "select * from tbl;" > tbl.csv

webbedfeet / find_peaks2.R

Created March 21, 2019 20:49

Finding peaks in a signal, based on work by Marcos Duarte (@demotu)

	#' Detect peaks in data based on their amplitude and other features
	#'
	#' Translated from the Python version at https://github.com/demotu/BMC
	#' License: MIT
	#' Version: 1.0
	#'
	#' @param x 1-d array
	#' @param mph (NA, number), optional (default = NA). Detect peaks wthat are greater than minimum peak height (if `valley=F`) or peaks that are smaller than maximum peak height (if `valley=T`)
	#' @param mpd positive integer, optional (default = 1). Detect peaks that are at least separated by minimum peak distance (in number of data)
	#' @param threshold positive number, optional (default = 0). Detect peaks (valleys) that are greater (smaller) than `threshold` in relation to their immediate neighbors

webbedfeet / analytic_wfm.py

Created June 24, 2018 16:29 — forked from sixtenbe/analytic_wfm.py

Peak detection in Python

	#!/usr/bin/python2


	# Copyright (C) 2016 Sixten Bergman
	# License WTFPL
	#
	# This program is free software. It comes without any warranty, to the extent
	# permitted by applicable law.
	# You can redistribute it and/or modify it under the terms of the Do What The
	# Fuck You Want To Public License, Version 2, as published by Sam Hocevar. See

webbedfeet / rmspace.sh

Created April 19, 2018 01:30

Replace spaces in filenames/directories recursively

	find . -name "* *" -print0 \| sort -rz \| \
	while read -d $'\0' f; do mv -v "$f" "$(dirname "$f")/$(basename "${f// /_}")"; done

webbedfeet / conv2docx.sh

Created April 19, 2018 01:05

Converting *.doc into *.docx recursively in a directory structure

	for file in $(find . -name "*.doc")
	do
	/Applications/LibreOffice.app/Contents/MacOS/soffice --convert-to docx $file
	done

webbedfeet / sas_export.py

Created June 24, 2017 04:13 — forked from mndrake/sas_export.py

SAS dataset to sqlite wrapper of the sas7bdat python package

	#!/usr/bin/python
	# Filename: sas_export.py
	# -- coding: utf-8 --
	"""
	Created on Tue Jan 06 18:40:09 2015
	@author: David Carlson
	modified version for sas7bdat 2.0.1 of Charlie Huang version at:
	http://www.sasanalysis.com/2014/08/python-extension-functions-to-translate.html
	"""

webbedfeet / common-sci-symbols.md

Created April 11, 2017 18:25 — forked from benmarwick/common-sci-symbols.md

Commonly used scientific symbols in pandoc markdown

encoding is UTF-8, needs pdflatex

per mille sign