Created
April 14, 2022 18:23
-
-
Save AladW/50bd935e8e65de00a216a9fe2af57508 to your computer and use it in GitHub Desktop.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
================================================================================ | |
Starting Configure Run at Thu Apr 14 20:23:41 2022 | |
Configure Options: --prefix=/home/archie/.cache/aurutils/sync/slepc/pkg/slepc/opt/slepc/linux-c-opt --with-clean=1 | |
Working directory: /home/archie/.cache/aurutils/sync/slepc/src/slepc-3.17.1 | |
Python version: | |
3.10.2 (main, Jan 15 2022, 19:56:27) [GCC 11.1.0] | |
make: /usr/bin/make | |
PETSc source directory: /opt/petsc/linux-c-opt | |
PETSc install directory: /opt/petsc/linux-c-opt | |
PETSc version: 3.17.0 | |
SLEPc source directory: /home/archie/.cache/aurutils/sync/slepc/src/slepc-3.17.1 | |
SLEPc install directory: /home/archie/.cache/aurutils/sync/slepc/pkg/slepc/opt/slepc/linux-c-opt | |
SLEPc version: 3.17.1 | |
================================================================================ | |
Checking PETSc installation... | |
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | |
Checking link with code: | |
#include "petscsnes.h" | |
int main() { | |
Vec v; Mat m; KSP k; | |
PetscInitializeNoArguments(); | |
VecCreate(PETSC_COMM_WORLD,&v); | |
MatCreate(PETSC_COMM_WORLD,&m); | |
KSPCreate(PETSC_COMM_WORLD,&k); | |
return 0; | |
} | |
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | |
Running command: | |
cd /tmp/slepc-7zs90ke3;/usr/bin/make checklink LINKFLAGS="" | |
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | |
Output: | |
/usr/bin/mpicc -o checklink.o -c -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -Wno-stringop-overflow -fstack-protector -fvisibility=hidden -O3 -march=x86-64 -mtune=generic -O2 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -fcf-protection -I/opt/petsc/linux-c-opt/include -I/usr/include/superlu -I/usr/include/scotch `pwd`/checklink.c | |
/usr/bin/mpicc -fPIC -Wall -Wwrite-strings -Wno-unknown-pragmas -Wno-stringop-overflow -fstack-protector -fvisibility=hidden -O3 -march=x86-64 -mtune=generic -O2 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security -fstack-clash-protection -fcf-protection -o checklink checklink.o -Wl,-rpath,/opt/petsc/linux-c-opt/lib -L/opt/petsc/linux-c-opt/lib -Wl,-rpath,/usr/lib/openmpi -L/usr/lib/openmpi -Wl,-rpath,/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0 -L/usr/lib/gcc/x86_64-pc-linux-gnu/11.2.0 -lpetsc -lspqr -lumfpack -lklu -lcholmod -lbtf -lccolamd -lcolamd -lcamd -lamd -lsuitesparseconfig -lsuperlu -lfftw3_mpi -lfftw3 -llapack -lblas -lesmumps -lptscotch -lptscotcherr -lscotch -lscotcherr -lbz2 -lhdf5hl_fortran -lhdf5_fortran -lhdf5_hl -lhdf5 -lparmetis -lmetis -lm -lX11 -lstdc++ -ldl -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lpthread -lquadmath -lstdc++ -ldl | |
/usr/bin/ld: cannot find -lsuperlu: No such file or directory | |
/usr/bin/ld: cannot find -lesmumps: No such file or directory | |
/usr/bin/ld: cannot find -lptscotch: No such file or directory | |
/usr/bin/ld: cannot find -lptscotcherr: No such file or directory | |
/usr/bin/ld: cannot find -lscotch: No such file or directory | |
/usr/bin/ld: cannot find -lscotcherr: No such file or directory | |
/usr/bin/ld: cannot find -lparmetis: No such file or directory | |
collect2: error: ld returned 1 exit status | |
make: *** [makefile:2: checklink] Error 1 | |
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | |
ERROR: Unable to link with PETSc |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment