Alexander Pico AlexanderPico
AlexanderPico
/ wikipathways2gource.py
Created
June 17, 2016 09:30
— forked from thomaskelder/wikipathways2gource.py
Small python script to create an input file for Gource (http://gource.io/) to visualize WikiPathways (http://www.wikipathways.org) edit histroy.
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| ## Get pathway edit history from wikipathways.org and export as gource log file | |
| ## Run using: | |
| ## python wikipathways2gource.py wikipathways.log | |
| ## View in gourse using: | |
| ## gource -1280x720 -a 3 --seconds-per-day 0.01 --hide dirnames,filenames --user-filter MaintBot --key wikipathways.log | |
| ## Create video with gource using: | |
| ## gource -1280x720 -a 2 --seconds-per-day 0.005 --hide dirnames,filenames --user-filter MaintBot --key --stop-at-end -o - wikipathways.log | ffmpeg -y -r 30 -f image2pipe -vcodec ppm -i - -vcodec libvpx -b 10000K wikipathways.webm | |
| ## Known issues/shortcomings: | |
| ## - Pathway ontology terms can have multiple parents, this is ignored, only first is taken here to prevent pathways from showing multiple times in the visualization |