mapping of valid GenBank feature keys to Ontobee sequence ontology

mapping.py

VALID_FEATURE_KEYS = {
  "attenuator": {'so': 'http://purl.obolibrary.org/obo/SO_0000140'},
  "C_region": {'so': 'http://purl.obolibrary.org/obo/SO_0100015'},
  "CAAT_signal": {'so': 'http://purl.obolibrary.org/obo/SO_0000172'},
  "CDS": {'so': 'http://purl.obolibrary.org/obo/SO_0000316'},
  "centromere": {'so': 'http://purl.obolibrary.org/obo/SO_0000577'},
  "D-loop": {'so': 'http://purl.obolibrary.org/obo/SO_0000297'},
  "D_segment": {'so': 'http://purl.obolibrary.org/obo/SO_0000458'},
  "enhancer": {'so': 'http://purl.obolibrary.org/obo/SO_0000165'},
  "exon": {'so': 'http://purl.obolibrary.org/obo/SO_0000147'},
  "GC_signal": {'so': 'http://purl.obolibrary.org/obo/SO_0000173'},
  "gene": {'so': 'http://purl.obolibrary.org/obo/SO_0000704'},
  "iDNA": {'so': 'http://purl.obolibrary.org/obo/SO_0000723'},
  "intron": {'so': 'http://purl.obolibrary.org/obo/SO_0000188'},
  "J_segment": {'so': 'http://purl.obolibrary.org/obo/SO_0000470'},
  "LTR": {'so': 'http://purl.obolibrary.org/obo/SO_0000286'},
  "mat_peptide": {'so': 'http://purl.obolibrary.org/obo/SO_0000419'},
  "misc_binding": {'so': 'http://purl.obolibrary.org/obo/SO_0001091'},
  "misc_difference": {'so': 'http://purl.obolibrary.org/obo/SO_0000413'},
  "misc_feature": {'so': 'http://purl.obolibrary.org/obo/SO_0000110'},
  "misc_recomb": {'so': 'http://purl.obolibrary.org/obo/SO_0000298'},
  "misc_RNA": {'so': 'http://purl.obolibrary.org/obo/SO_0000863'},
  "misc_signal": {'so': 'http://purl.obolibrary.org/obo/SO_0005836'},
  "misc_structure": {'so': 'http://purl.obolibrary.org/obo/SO_0000142'},
  "mobile_element": {'so': 'http://purl.obolibrary.org/obo/SO_0001037'},
  "modified_base": {'so': 'http://purl.obolibrary.org/obo/SO_0000305'},
  "mRNA": {'so': 'http://purl.obolibrary.org/obo/SO_0000234'},
  "ncRNA": {'so': 'http://purl.obolibrary.org/obo/SO_0000655'},
  "N_region": {'so': 'http://purl.obolibrary.org/obo/SO_0000563'},
  "operon": {'so': 'http://purl.obolibrary.org/obo/SO_0000178'},
  "oriT": {'so': 'http://purl.obolibrary.org/obo/SO_0000724'},
  "polyA_signal": {'so': 'http://purl.obolibrary.org/obo/SO_0000551'},
  "polyA_site": {'so': 'http://purl.obolibrary.org/obo/SO_0000553'},
  "precursor_RNA": {'so': 'http://purl.obolibrary.org/obo/SO_0000185'},
  "prim_transcript": {'so': 'http://purl.obolibrary.org/obo/SO_0000185'},
  "primer_bind": {'so': 'http://purl.obolibrary.org/obo/SO_0005850'},
  "promoter": {'so': 'http://purl.obolibrary.org/obo/SO_0000167'},
  "protein_bind": {'so': 'http://purl.obolibrary.org/obo/SO_0000410'},
  "RBS": {'so': 'http://purl.obolibrary.org/obo/SO_0000552'},
  "repeat_region": {'so': 'http://purl.obolibrary.org/obo/SO_0000657'},
  "rep_origin": {'so': 'http://purl.obolibrary.org/obo/SO_0000296'},
  "rRNA": {'so': 'http://purl.obolibrary.org/obo/SO_0000252'},
  "S_region": {'so': 'http://purl.obolibrary.org/obo/SO_0000301'},
  "sig_peptide": {'so': 'http://purl.obolibrary.org/obo/SO_0000418'},
  "source": {'so': 'http://purl.obolibrary.org/obo/SO_0001260'},
  "stem_loop": {'so': 'http://purl.obolibrary.org/obo/SO_0000313'},
  "STS": {'so': 'http://purl.obolibrary.org/obo/SO_0000331'},
  "TATA_signal": {'so': 'http://purl.obolibrary.org/obo/SO_0000174'},
  "telomere": {'so': 'http://purl.obolibrary.org/obo/SO_0000624'},
  "terminator": {'so': 'http://purl.obolibrary.org/obo/SO_0000141'},
  "tmRNA": {'so': 'http://purl.obolibrary.org/obo/SO_0000584'},
  "transit_peptide": {'so': 'http://purl.obolibrary.org/obo/SO_0000725'},
  "tRNA": {'so': 'http://purl.obolibrary.org/obo/SO_0000253'},
  "unsure": {'so': 'http://purl.obolibrary.org/obo/SO_0001086'},
  "V_region": {'so': 'http://purl.obolibrary.org/obo/SO_0000936'},
  "V_segment": {'so': 'http://purl.obolibrary.org/obo/SO_0000538'},
  "variation": {'so': 'http://purl.obolibrary.org/obo/SO_0001147'},
  "3'UTR": {'so': 'http://purl.obolibrary.org/obo/SO_0000205'},
  "5'UTR": {'so': 'http://purl.obolibrary.org/obo/SO_0000204'},
  "-10_signal": {'so': 'http://purl.obolibrary.org/obo/SO_0000175'},
  "-35_signal": {'so': 'http://purl.obolibrary.org/obo/SO_0000176'},
}