DanHickstein’s gists

DanHickstein / fix_direct.py

Created January 1, 2018 21:20

	import numpy as np
	import matplotlib.pyplot as plt
	import sys
	import abel
	import scipy.integrate

	transforms = [
	# ("BASEX" , abel.basex.basex_transform),
	# ("linbasex" , abel.linbasex.linbasex_transform),
	# must have higher symmetry for linbasex

DanHickstein / abelloop.py

Created January 1, 2018 21:02

	# from abel.analytical import GaussianAnalytical
	import matplotlib.pyplot as plt
	import numpy as np
	import scipy.integrate
	import time
	import warnings
	# warnings.filterwarnings("ignore")

	r = np.linspace(0,10,51)
	height = 5

DanHickstein / colorized.tex

Created January 1, 2018 16:59

	% \documentclass{article}
	\documentclass[preview]{standalone}
	\usepackage[utf8]{inputenc}
	\usepackage{amsmath}
	\usepackage{amssymb}
	\usepackage{color}

	\renewcommand{\familydefault}{\sfdefault}

	\definecolor{c1}{RGB}{114,0,172} % primary

DanHickstein / experiment_compare.py

Created December 28, 2017 03:11

	import numpy as np
	import matplotlib.pyplot as plt
	import sys, os
	import abel


	transforms = [
	("BASEX" , 'basex' ),
	("Lin-BASEX" , 'linbasex' ),
	("Direct" , 'direct' ),

DanHickstein / Gaussian compare.py

Created December 20, 2017 04:38

	import numpy as np
	import matplotlib.pyplot as plt
	import sys
	import abel

	transforms = [
	("BASEX" , abel.basex.basex_transform),
	# ("linbasex" , abel.linbasex.linbasex_transform),
	# must have higher symmetry for linbasex
	("Direct" , abel.direct.direct_transform),

DanHickstein / gaussian_comparison.py

Created December 16, 2017 20:40

	import numpy as np
	import matplotlib.pyplot as plt
	import sys
	import abel

	transforms = {
	"basex": abel.basex.basex_transform,
	# "linbasex": abel.linbasex.linbasex_transform,
	"direct": abel.direct.direct_transform,
	"hansenlaw": abel.hansenlaw.hansenlaw_transform,

DanHickstein / benchmarks_16.7.0x86_64Darwin_2017-11-06 17h15m49s.csv

Created November 6, 2017 17:32

We can make this file beautiful and searchable if this error is corrected: It looks like row 2 should actually have 1 column, instead of 19 in line 1.

	system information: Intel(R) Core(TM) i7-5557U CPU @ 3.10GHz16.7.0x86_64Darwin2.7.13
	n, basex, basex_bs, direct_C, direct_C_f, direct_Python, direct_Python_f, hansenlaw, hansenlaw_f, linbasex, linbasex_bs, onion_bordas, onion_peeling, onion_peeling_bs, two_point, two_point_bs, three_point, three_point_bs,
	101, 0.355, 307.988, 1.073, 0.889, 8.973, 8.731, 2.977, 2.035, 7.562, 0.989, 46.556, 0.075, 0.624, 0.082, 0.829, 0.074, 1.667,
	145, 0.853, 806.014, 2.352, 4.204, 18.338, 19.016, 5.344, 4.279, 11.060, 1.706, 121.463, 0.144, 0.845, 0.217, 0.912, 0.540, 3.066,
	213, 2.293, 2126.145, 7.182, 5.839, 44.457, 40.238, 11.123, 4.818, 25.126, 3.690, 227.825, 0.344, 2.059, 0.473, 2.236, 0.320,

DanHickstein / opticaArxiv.cls

Created August 28, 2017 16:48

A modified Optica class file that removes the "Optica" text, and makes a few other improvements

	%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
	% File: opticaArxiv.cls
	% Version: 1.4
	% Date: 25 Aug 2016
	%
	% Hacked on Aug 15 2017, to produce a "preprint"
	% suitable for submission to ArXiv, or similar.
	%
	% - Removed "Optica" text in header
	% - Changed "Research Article" to "Preprint" in header

DanHickstein / opticaArxiv.cls

Created August 28, 2017 16:48

A modified Optica class file that removes the "Optica" text, and makes a few other improvements

	%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
	% File: opticaArxiv.cls
	% Version: 1.4
	% Date: 25 Aug 2016
	%
	% Hacked on Aug 15 2017, to produce a "preprint"
	% suitable for submission to ArXiv, or similar.
	%
	% - Removed "Optica" text in header
	% - Changed "Research Article" to "Preprint" in header

DanHickstein / ThorlabsK10CR1.py

Created June 15, 2017 21:47

	import ctypes as c
	import numpy as np
	import os, time

	dllname = os.path.join(os.path.dirname(__file__), 'Thorlabs.MotionControl.IntegratedStepperMotors.dll')

	if not os.path.exists(dllname):
	print "ERROR: DLL not found"

	p = c.windll.LoadLibrary(dllname)

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