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lmOut <- function(res, file="test.csv", ndigit=3, writecsv=T) { | |
# If summary has not been run on the model then run summary | |
if (length(grep("summary", class(res)))==0) res <- summary(res) | |
co <- res$coefficients | |
nvar <- nrow(co) | |
ncol <- ncol(co) | |
f <- res$fstatistic | |
formatter <- function(x) format(round(x,ndigit),nsmall=ndigit) | |
# This sets the number of rows before we start recording the coefficients | |
nstats <- 4 | |
# G matrix stores data for output | |
G <- matrix("", nrow=nvar+nstats, ncol=ncol+1) | |
G[1,1] <- toString(res$call) | |
# Save rownames and colnames | |
G[(nstats+1):(nvar+nstats),1] <- rownames(co) | |
G[nstats, 2:(ncoll+1)] <- colnames(co) | |
# Save Coefficients | |
G[(nstats+1):(nvar+nstats), 2:(ncol+1)] <- formatter(co) | |
# Save F-stat | |
G[1,2] <- paste0("F(",f[2],",",f[3],")") | |
G[2,2] <- formatter(f[1]) | |
# Save F-p value | |
G[1,3] <- "Prob > P" | |
G[2,3] <- formatter(1-pf(f[1],f[2],f[3])) | |
# Save R2 | |
G[1,4] <- "R-Squared" | |
G[2,4] <- formatter(res$r.squared) | |
# Save Adj-R2 | |
G[1,5] <- "Adj-R2" | |
G[2,5] <- formatter(res$adj.r.squared) | |
print(G) | |
if (writecsv) write.csv(G, file=file, row.names=F) | |
} | |
lmOut(res) | |
# First let's generate some fake binary response data (from yesterday's post). | |
Nobs <- 10^4 | |
X <- cbind(cons=1, X1=rnorm(Nobs),X2=rnorm(Nobs),X3=rnorm(Nobs),u=rnorm(Nobs)) | |
B <- c(B0=-.2, B1=-.1,B2=0,B3=-.2,u=5) | |
Y <- X%*%B | |
SData <- as.data.frame(cbind(Y, X)) | |
# Great, we have generated our data. | |
myres <- lm(Y ~ X1 + X2 + X3, data=SData) | |
lmOut(myres, file="my-results.csv") |
Hi,
This function is great and I appreciate you putting it together. Question that I can't figure out unfortunately (I am a beginner.)
Trying to loop the output for multiple regressions that I'm doing across monthly samples.
This works fine: lmOut(m_2014-01-31
,file="my-results.csv")
But the loop below (where monthschar[1]= 2014-01-31) does not work and returns:
Error in res$coefficients : $ operator is invalid for atomic vectors
for (i in 1:length(monthschar)) {
lmOut(paste("m_",monthschar[i],sep="",paste("
",sep="")),
file=paste("output",monthschar[i],sep=""),paste(".csv",sep=""))
}
Any idea why this is happening? The silly quotation marks (`) that R put around the models I generated with another for loop are the reason I attached the ugly paste notation.
Thank you!
Hi
Thanks for the function. I encounter this error:
Error in matrix("", nrow = (nvar + nstats), ncol = (ncoll + 1)) :
invalid 'nrow' value (too large or NA)
I am using a linear mixed effect model.
Thanks
thanks for the code ...I am also a beginner and it is very useful... thanks for putting putting some sense into to responder2 on R bloogers... http://www.r-bloggers.com/export-r-results-tables-to-excel-please-dont-kick-me-out-of-your-club/
Just curious, why haven't you made this into a package?
much more canonical than
if (length(grep("summary", class(res)))==0)
would be
if (inherits(res, 'summary.lm'))
Thank you this is very helpful. I did notice that line 7 and line 17 and 19 all need to be consistent "ncol" or "ncoll" .
@MichaelChirico: I change
"if (length(grep("summary", class(res)))==0) res <- summary(res) "
to
" if (inherits(res, 'summary.lm')) res <- summary(res)"
but then the function throws an error:
"Error in matrix("", nrow = nvar + nstats, ncol = ncol + 1) :
invalid 'nrow' value (too large or NA)"
The original version does produce the "my-results.csv" output file.
Hello, many thanks for this :) I'm trying to run it but I'm getting the following error:
Error in grep("summary", class(res)) : object 'res' not found
Apologies if this is something basic, I am very, very new to R!
Thanks
Hi, really helpful! is there any version of this function that works with logistic regressions?
To make it work with plm
models, modify code this way:
- change
f[1]
tof[2]$statistic
- change
f[2]
tof[3]$parameter["df1"]
- change
f[3]
tof[3]$parameter["df2"]
- change
res$r.squared
tores$r.squared["rsq"]
- change
res$adj.r.squared
tores$r.squared["adjrsq"]
Hi, thanks for writing this helpful function. I'm curious that is there any way to use it when I do the regression under glm function?
Thanks for the corrections!