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F1 score in PyTorch
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def f1_loss(y_true:torch.Tensor, y_pred:torch.Tensor, is_training=False) -> torch.Tensor: | |
'''Calculate F1 score. Can work with gpu tensors | |
The original implmentation is written by Michal Haltuf on Kaggle. | |
Returns | |
------- | |
torch.Tensor | |
`ndim` == 1. 0 <= val <= 1 | |
Reference | |
--------- | |
- https://www.kaggle.com/rejpalcz/best-loss-function-for-f1-score-metric | |
- https://scikit-learn.org/stable/modules/generated/sklearn.metrics.f1_score.html#sklearn.metrics.f1_score | |
- https://discuss.pytorch.org/t/calculating-precision-recall-and-f1-score-in-case-of-multi-label-classification/28265/6 | |
''' | |
assert y_true.ndim == 1 | |
assert y_pred.ndim == 1 or y_pred.ndim == 2 | |
if y_pred.ndim == 2: | |
y_pred = y_pred.argmax(dim=1) | |
tp = (y_true * y_pred).sum().to(torch.float32) | |
tn = ((1 - y_true) * (1 - y_pred)).sum().to(torch.float32) | |
fp = ((1 - y_true) * y_pred).sum().to(torch.float32) | |
fn = (y_true * (1 - y_pred)).sum().to(torch.float32) | |
epsilon = 1e-7 | |
precision = tp / (tp + fp + epsilon) | |
recall = tp / (tp + fn + epsilon) | |
f1 = 2* (precision*recall) / (precision + recall + epsilon) | |
f1.requires_grad = is_training | |
return f1 |
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