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dplyr as a CLI. Never use awk again.
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#!/usr/bin/env Rscript | |
# (Don't forget: `chmod +x dplyr`) | |
# Copyright 2018 Eoin Travers <[email protected]> | |
# | |
# This file is free software: you may copy, redistribute and/or modify it | |
# under the terms of the GNU General Public License as published by the | |
# Free Software Foundation, either version 2 of the License, or (at your | |
# option) any later version. | |
# | |
# This file is distributed in the hope that it will be useful, but | |
# WITHOUT ANY WARRANTY; without even the implied warranty of | |
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
# General Public License for more details. | |
# | |
# You should have received a copy of the GNU General Public License | |
# along with this program. If not, see <http://www.gnu.org/licenses/>. | |
suppressMessages(library(optparse)) | |
suppressMessages(library(dplyr)) | |
option_list <- list( | |
make_option(c("-p", "--pretty"), action="store_true", default=FALSE, | |
help="Print result tibble, rather than raw csv. [default FALSE]") | |
) | |
parser <- OptionParser( | |
usage = "dplyr [options] data.csv 'data %>% command1() %>% command2()'", | |
option_list=option_list) | |
arguments <- parse_args(parser, positional_arguments = 2) | |
args <- arguments$args | |
stopifnot(length(args)==2) | |
inp <- args[[1]] | |
cmd <- args[[2]] | |
data <- read.csv(inp) %>% as.tbl | |
result <- parse(text=cmd) %>% eval() | |
if(arguments$options$pretty){ | |
print(result) | |
} else { | |
txt <- textConnection('csv_result', 'w') | |
write.csv(result, txt, quote=F, row.names=F) | |
paste(csv_result, collapse='\n') %>% paste0('\n') %>% cat() | |
} |
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