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November 16, 2017 01:33
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| [ lampam @ 20:17:42 ] (!!!) (master •10 -53 +188) ~/cpp/other/rust/rsp22 | |
| $ rustup toolchain add nightly | |
| info: syncing channel updates for 'nightly-x86_64-unknown-linux-gnu' | |
| 240.9 KiB / 240.9 KiB (100 %) 240.9 KiB/s ETA: 0 s | |
| info: latest update on 2017-11-16, rust version 1.23.0-nightly (fa26421f5 2017-11-15) | |
| info: downloading component 'rustc' | |
| 44.2 MiB / 44.2 MiB (100 %) 5.1 MiB/s ETA: 0 s | |
| info: downloading component 'rust-std' | |
| 59.9 MiB / 59.9 MiB (100 %) 5.0 MiB/s ETA: 0 s | |
| info: downloading component 'cargo' | |
| info: downloading component 'rust-docs' | |
| 4.2 MiB / 4.2 MiB (100 %) 1.0 MiB/s ETA: 0 s | |
| info: installing component 'rustc' | |
| info: installing component 'rust-std' | |
| info: installing component 'cargo' | |
| info: installing component 'rust-docs' | |
| nightly-x86_64-unknown-linux-gnu installed - rustc 1.23.0-nightly (fa26421f5 2017-11-15) | |
| [ lampam @ 20:18:36 ] (master •10 -53 +188) ~/cpp/other/rust/rsp22 | |
| $ CARGO_INCREMENTAL=1 cargo +nightly run --example acgsd-graphene -- -c ../rsp2/playground/newewwewerwer2/input/settings.yaml ../rsp2/playground/newewwewerwer2/input/layers-ab/061-a/layers.yaml -o 061-a-take3 -f --save-forces | |
| Updating registry `https://github.com/rust-lang/crates.io-index` | |
| Updating git repository `https://github.com/ExpHP/rsp2-kets` | |
| Updating git repository `https://github.com/ExpHP/lammps-sys` | |
| Downloading ansi_term v0.10.2 | |
| Downloading clap v2.27.1 | |
| Downloading slice-of-array v0.1.1 | |
| Downloading fern v0.4.3 | |
| Downloading serde_yaml v0.7.1 | |
| Downloading serde_json v1.0.6 | |
| Downloading rand v0.3.18 | |
| Downloading itertools v0.7.2 | |
| Downloading log v0.3.8 | |
| Downloading env_logger v0.4.3 | |
| Downloading atty v0.2.3 | |
| Downloading strsim v0.6.0 | |
| Downloading vec_map v0.8.0 | |
| Downloading textwrap v0.9.0 | |
| Downloading unicode-width v0.1.4 | |
| Downloading ansi_term v0.9.0 | |
| Downloading bitflags v0.9.1 | |
| Downloading error-chain v0.11.0 | |
| Downloading backtrace v0.3.3 | |
| Downloading cfg-if v0.1.2 | |
| Downloading rustc-demangle v0.1.5 | |
| Downloading serde_derive v1.0.20 | |
| Downloading serde v1.0.20 | |
| Downloading rayon v0.8.2 | |
| Downloading dtoa v0.4.2 | |
| Downloading num-traits v0.1.40 | |
| Downloading itoa v0.3.4 | |
| Downloading syn v0.11.11 | |
| Downloading quote v0.3.15 | |
| Downloading serde_derive_internals v0.17.0 | |
| Downloading unicode-xid v0.0.4 | |
| Downloading synom v0.11.3 | |
| Downloading tempdir v0.3.5 | |
| Downloading libc v0.2.33 | |
| Downloading ordered-float v0.5.0 | |
| Downloading either v1.3.0 | |
| Downloading unreachable v0.1.1 | |
| Downloading void v1.0.2 | |
| Downloading regex v0.2.2 | |
| Downloading aho-corasick v0.6.3 | |
| Downloading utf8-ranges v1.0.0 | |
| Downloading regex-syntax v0.4.1 | |
| Downloading memchr v1.0.2 | |
| Downloading thread_local v0.3.4 | |
| Downloading lazy_static v0.2.9 | |
| Downloading unreachable v1.0.0 | |
| Downloading chrono v0.4.0 | |
| Downloading ndarray v0.10.12 | |
| Downloading num v0.1.40 | |
| Downloading time v0.1.38 | |
| Downloading num-iter v0.1.34 | |
| Downloading num-integer v0.1.35 | |
| Downloading blas-sys v0.6.9 | |
| Downloading matrixmultiply v0.1.14 | |
| Downloading num-complex v0.1.40 | |
| Downloading rawpointer v0.1.0 | |
| Downloading rustc-serialize v0.3.24 | |
| Downloading bindgen v0.31.3 | |
| Downloading clang-sys v0.21.0 | |
| Downloading which v1.0.3 | |
| Downloading peeking_take_while v0.1.2 | |
| Downloading cexpr v0.2.2 | |
| Downloading libloading v0.4.2 | |
| Downloading glob v0.2.11 | |
| Downloading nom v3.2.1 | |
| Downloading yaml-rust v0.3.5 | |
| Downloading linked-hash-map v0.4.2 | |
| Downloading linked-hash-map v0.3.0 | |
| Downloading byte-tools v0.2.0 | |
| Downloading rayon-core v1.3.0 | |
| Downloading num_cpus v1.7.0 | |
| Downloading coco v0.1.1 | |
| Downloading scopeguard v0.3.3 | |
| Downloading ndarray-linalg v0.7.1 | |
| Downloading derive-new v0.4.0 | |
| Downloading openblas-src v0.5.4 | |
| Downloading lapack v0.13.2 | |
| Downloading procedurals v0.2.3 | |
| Downloading syn v0.8.7 | |
| Downloading quote v0.2.3 | |
| Downloading unicode-xid v0.0.3 | |
| Downloading lapack-sys v0.11.7 | |
| Downloading backtrace-sys v0.1.16 | |
| Downloading cc v1.0.3 | |
| Compiling peeking_take_while v0.1.2 | |
| Compiling libc v0.2.33 | |
| Compiling unicode-xid v0.0.3 | |
| Compiling regex-syntax v0.4.1 | |
| Compiling rsp2-util-macros v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/util/macros) | |
| Compiling void v1.0.2 | |
| Compiling bindgen v0.31.3 | |
| Compiling log v0.3.8 | |
| Compiling linked-hash-map v0.3.0 | |
| Compiling linked-hash-map v0.4.2 | |
| Compiling dtoa v0.4.2 | |
| Compiling quote v0.3.15 | |
| Compiling unicode-width v0.1.4 | |
| Compiling slice-of-array v0.1.1 | |
| Compiling rawpointer v0.1.0 | |
| Compiling scopeguard v0.3.3 | |
| Compiling rsp2-assert-close v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/util/assert-close) | |
| Compiling glob v0.2.11 | |
| Compiling rayon-core v1.3.0 | |
| Compiling ansi_term v0.10.2 | |
| Compiling lazy_static v0.2.9 | |
| Compiling vec_map v0.8.0 | |
| Compiling itoa v0.3.4 | |
| Compiling rsp2-slice-math v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/util/slice-math) | |
| Compiling rustc-serialize v0.3.24 | |
| Compiling cc v1.0.3 | |
| Compiling cfg-if v0.1.2 | |
| Compiling matrixmultiply v0.1.14 | |
| Compiling num-traits v0.1.40 | |
| Compiling quote v0.2.3 | |
| Compiling ndarray v0.10.12 | |
| Compiling openblas-src v0.5.4 | |
| Compiling ansi_term v0.9.0 | |
| Compiling bitflags v0.9.1 | |
| Compiling either v1.3.0 | |
| Compiling byte-tools v0.2.0 | |
| Compiling utf8-ranges v1.0.0 | |
| Compiling unicode-xid v0.0.4 | |
| Compiling rustc-demangle v0.1.5 | |
| Compiling strsim v0.6.0 | |
| Compiling libloading v0.4.2 | |
| Compiling unreachable v0.1.1 | |
| Compiling unreachable v1.0.0 | |
| Compiling blas-sys v0.6.9 | |
| Compiling rand v0.3.18 | |
| Compiling atty v0.2.3 | |
| Compiling memchr v1.0.2 | |
| Compiling time v0.1.38 | |
| Compiling which v1.0.3 | |
| Compiling num_cpus v1.7.0 | |
| Compiling fern v0.4.3 | |
| Compiling yaml-rust v0.3.5 | |
| Compiling textwrap v0.9.0 | |
| Compiling clang-sys v0.21.0 | |
| Compiling syn v0.8.7 | |
| Compiling rsp2-array-utils v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/util/array) | |
| Compiling num-integer v0.1.35 | |
| Compiling backtrace-sys v0.1.16 | |
| Compiling rsp2-byte-tools-plus-float v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/util/byte-tools-plus-float) | |
| Compiling coco v0.1.1 | |
| Compiling itertools v0.7.2 | |
| Compiling synom v0.11.3 | |
| Compiling ordered-float v0.5.0 | |
| Compiling thread_local v0.3.4 | |
| Compiling aho-corasick v0.6.3 | |
| Compiling nom v3.2.1 | |
| Compiling num-complex v0.1.40 | |
| Compiling tempdir v0.3.5 | |
| Compiling clap v2.27.1 | |
| Compiling num-iter v0.1.34 | |
| Compiling derive-new v0.4.0 | |
| Compiling syn v0.11.11 | |
| Compiling rsp2-eigenvector-classify v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/math/eigenvector-classify) | |
| Compiling regex v0.2.2 | |
| Compiling rsp2-tempdir v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/util/tempdir) | |
| Compiling lapack-sys v0.11.7 | |
| Compiling num v0.1.40 | |
| Compiling rayon v0.8.2 | |
| Compiling cexpr v0.2.2 | |
| Compiling serde_derive_internals v0.17.0 | |
| Compiling procedurals v0.2.3 | |
| Compiling lapack v0.13.2 | |
| Compiling chrono v0.4.0 | |
| Compiling env_logger v0.4.3 | |
| Compiling backtrace v0.3.3 | |
| Compiling serde_derive v1.0.20 | |
| Compiling error-chain v0.11.0 | |
| Compiling ndarray-linalg v0.7.1 | |
| Compiling rsp2-structure v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/structure) | |
| Compiling rsp2-fs-util v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/util/fs) | |
| Compiling rsp2-linalg v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/math/linalg) | |
| Compiling serde v1.0.20 | |
| Compiling rsp2-structure-io v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/util/structure-io) | |
| Compiling serde_json v1.0.6 | |
| Compiling rsp2-kets v0.3.6 (https://github.com/ExpHP/rsp2-kets#5e4f7e91) | |
| Compiling serde_yaml v0.7.1 | |
| Compiling lammps-sys v0.2.0 (https://github.com/ExpHP/lammps-sys?tag=v0.2.0#b0562eb2) | |
| Compiling rsp2-minimize v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/minimize) | |
| Compiling rsp2-structure-gen v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/structure-gen) | |
| Compiling rsp2-phonopy-io v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/phonopy-io) | |
| Compiling rsp2-lammps-wrap v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/lammps-wrap) | |
| warning: method is never used: `gather_atoms_i` | |
| --> src/lammps-wrap/lib.rs:277:5 | |
| | | |
| 277 | pub unsafe fn gather_atoms_i(&mut self, name: &str, count: usize) -> Result<Vec<i64>> | |
| | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ | |
| | | |
| = note: #[warn(dead_code)] on by default | |
| warning: method is never used: `scatter_atoms_i` | |
| --> src/lammps-wrap/lib.rs:329:5 | |
| | | |
| 329 | pub unsafe fn scatter_atoms_i(&mut self, name: &str, data: &[i64]) -> Result<()> | |
| | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ | |
| Compiling rsp2-tasks v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22/src/tasks) | |
| warning: unused macro definition | |
| --> src/tasks/lib.rs:30:1 | |
| | | |
| 30 | / macro_rules! ichain { | |
| 31 | | ($e:expr,) => { $e.into_iter() }; | |
| 32 | | ($e:expr, $($es:expr,)+) | |
| 33 | | => { $e.into_iter().chain(ichain!($($es,)+)) }; | |
| 34 | | } | |
| | |_^ | |
| | | |
| = note: #[warn(unused_macros)] on by default | |
| Compiling rsp2 v0.1.0 (file:///home/lampam/cpp/other/rust/rsp22) | |
| error: linking with `cc` failed: exit code: 1 | |
| | | |
| = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-L" "/home/lampam/.rustup/toolchains/nightly-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.__rustc_fallback_codegen_unit.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.acgsd_graphene.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-allocator.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-allocator.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-arc.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-borrow.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-boxed.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-btree-map.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-btree-node.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-heap.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-heap.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-raw_vec.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-raw_vec.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-rc.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-slice-hack.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-slice.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-str.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-str.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-string.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-string.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-vec.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-vec_deque.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.alloc-vec_deque.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.backtrace-capture.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.clap-app.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.clap-args-arg.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.clap-args-arg_builder-flag.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.clap-args-arg_builder-option.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.clap-args-arg_matches.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.clap-args-group.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.clap-args-matched_arg.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.core-any.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.core-borrow.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.core-cell.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.core-char.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.core-cmp-impls.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.core-cmp-impls.volatile.rcgu.o" "/home/lampam/cpp/other/rust/rsp22/target/debug/examples/acgsd_graphene-6b4367cc6c7167e7.core-cmp.volatile.rcgu.o" 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"/home/lampam/.rustup/toolchains/nightly-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd_unicode-a45148faf8aa87c8.rlib" "/home/lampam/.rustup/toolchains/nightly-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-60aa1ef426345cd6.rlib" "/home/lampam/.rustup/toolchains/nightly-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-4da16ba85b9ac735.rlib" "-Wl,-Bdynamic" "-l" "lammps" "-l" "util" "-l" "util" "-l" "dl" "-l" "rt" "-l" "pthread" "-l" "pthread" "-l" "gcc_s" "-l" "c" "-l" "m" "-l" "rt" "-l" "pthread" "-l" "util" "-l" "util" | |
| = note: /home/lampam/cpp/other/rust/rsp22/target/debug/deps/librsp2_lammps_wrap-e59a3fe419da22de.rlib(rsp2_lammps_wrap-e59a3fe419da22de.rsp2_lammps_wrap.rcgu.o): In function `rsp2_lammps_wrap::{{impl}}::pop_error': | |
| /home/lampam/cpp/other/rust/rsp22/src/lammps-wrap/lib.rs:238: undefined reference to `lammps_has_error' | |
| /home/lampam/cpp/other/rust/rsp22/src/lammps-wrap/lib.rs:246: undefined reference to `lammps_get_last_error_message' | |
| collect2: error: ld returned 1 exit status |
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