Created
April 2, 2020 21:27
-
-
Save FlukeAndFeather/90040b795850e45251437554d9570b3a to your computer and use it in GitHub Desktop.
Simulate prey fields with a spectral power law of spatial frequency to the –1.5
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
library(raster) | |
library(scales) | |
library(tidyverse) | |
powpow <- function(n, a, b) { | |
# based on answers at: https://dsp.stackexchange.com/questions/47640/generating-a-timeseries-with-an-arbitrary-power-spectrum | |
# Thank you Sam! | |
if (n %% 2 != 0) | |
stop("n must be even") | |
n0 <- n / 2 | |
# the frequencies for the FFT of a time serie with n samples | |
freqs <- 0:(n0 - 1) / n | |
freqs <- c(freqs, -n0 / n, -rev(freqs[2:n0])) | |
pow <- a * abs(freqs)^b # the power-law power spectrum we want | |
pow[1] <- 1 # make the 0-frequency term finite | |
phase <- runif(n0, 0, 2 * pi) | |
phase <- c(phase, -phase) | |
xft <- sqrt(pow) * exp(phase * 1i) | |
Re(fft(xft, inverse = TRUE)) | |
} | |
# simulate a 2d prey field | |
sim_prey <- function(n, a, b, r_sz, xmn, xmx, ymn, ymx) { | |
prey <- tibble(x = powpow(n, a, b), | |
y = powpow(n, a, b)) %>% | |
mutate(x = rescale(x, to = c(xmn, xmx)), | |
y = rescale(y, to = c(ymn, ymx))) | |
# rasterize to get density | |
r <- raster(matrix(0, r_sz, r_sz), | |
xmn = xmn, xmx = xmx, | |
ymn = ymn, ymx = ymx) | |
counts <- table(cellFromXY(r, as.matrix(prey))) | |
r[as.numeric(names(counts))] <- counts | |
r | |
} | |
prey_fields <- map(1:9, ~ sim_prey(2^22, 0.05, -1.5, 2.5e2, 0, 1e2, 0, 1e2)) | |
par(mfrow = c(3, 3)) | |
for (i in seq_along(prey_fields)) { | |
plot(prey_fields[[i]], main = paste("Prey field", i)) | |
} | |
par(mfrow = c(1, 1)) |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment