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Last active December 2, 2021 09:37
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GV docker file
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Dockerfile
FROM ubuntu:latest
RUN apt update && apt install -y --no-install-recommends curl ca-certificates
# Latest version can be determined by running:
# curl -ksL https://api.github.com/repos/wurmlab/genevalidator/releases/latest | grep browser_download_url | grep -i linux | cut -d '"' -f 4
ENV DOWNLOAD_URL https://github.com/wurmlab/genevalidator/releases/download/2.1.11/genevalidator-2.1.11-linux-x86_64.tar.gz
WORKDIR /GV
RUN curl -kSL ${DOWNLOAD_URL} | tar zxf - -C /GV --strip-components 1 && rm -r /GV/blast_db
ENV PATH="/GV/bin:${PATH}"
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