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examples (c, local n most recent observations) from the redesign of RollingFunctions.jl
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# see example at line 80 | |
using StatsBase | |
function StatsBase.median(a::T, b::T, c::T) where {T} | |
b, c = minmax(b, c) | |
a, c = minmax(a, c) | |
max(a, b) | |
end | |
abstract type Accumulator{T} <: Function end | |
const AccNum = Float64 # client settable via ENV | |
StatsBase.nobs(acc::Accumulator) = acc.nobs | |
fn(acc::Accumulator) = acc.fn | |
mem(acc::Accumulator) = acc.mem | |
mem(acc::Accumulator, idx::Int) = @inbounds mem(acc)[idx] | |
mem(acc::Accumulator, idxs::StepRange) = @inbounds mem(acc)[idxs] | |
nmem(acc::Accumulator) = length(mem(acc)) | |
#= | |
incremental accumulation of the mean and standard deviation | |
using the median of the current and two most recent observations | |
=# | |
mutable struct AccMeanStd{T,N} <: Accumulator{T} | |
nobs::Int | |
mean::T | |
svar::T | |
mem::NTuple{N,T} | |
end | |
function AccMeanStd(::Type{T}=AccNum, nmem::Int=2) where {T} | |
AccMeanStd{T,nmem}(0, zero(T), zero(T), ntuple(z->zero(T), nmem)) | |
end | |
function (acc::AccMeanStd{T})() where {T} | |
if isone(acc.nobs) | |
(acc.mem[1], zero(T)) | |
else | |
unbiased_var = acc.svar / (acc.nobs- 1) | |
(acc.mean, sqrt(unbiased_var)) | |
end | |
end | |
function (acc::AccMeanStd{T})(x) where {T} | |
acc.nobs += 1 | |
prior_mean = acc.mean | |
y = median(x, acc.mem[1], acc.mem[2]) | |
change = y - prior_mean | |
acc.mean = change / acc.nobs + prior_mean | |
acc.svar = change * (y - acc.mean) + acc.svar | |
acc.mem = (x, acc.mem[1]) | |
acc | |
end | |
function (acc::AccMeanStd{T})(xs::A) where {T, A<:AbstractVector{T}} | |
for i in eachindex(xs) | |
acc(xs[i]) | |
end | |
acc | |
end | |
function (acc::AccMeanStd{T})(xs::NTuple{N,T}) where {T, N} | |
for i in eachindex(xs) | |
acc(xs[i]) | |
end | |
acc | |
end | |
#= | |
the following example shows | |
mean of median of 3 at index 1 = 5.0 | |
standard deviation at index 1 = 0.0 | |
mean of median of 3 at index 2 = 2.5 | |
standard deviation at index 2 = 3.535534 | |
mean of median of 3 at index 3 = 3.3333333 | |
standard deviation at index 3 = 2.8867514 | |
mean of median of 3 at index 4 = 3.5 | |
standard deviation at index 4 = 2.3804762 | |
mean of median of 3 at index 5 = 2.2 | |
standard deviation at index 5 = 3.5637062 | |
mean of median of 3 at index 6 = 1.3333335 | |
standard deviation at index 6 = 3.8297086 | |
mean of median of 3 at index 7 = 1.2857144 | |
standard deviation at index 7 = 3.498299 | |
mean of median of 3 at index 8 = 1.2500001 | |
standard deviation at index 8 = 3.2403703 | |
=# | |
xs = Float32[5, 8, 4, -3, -6, 3, 1, -9] | |
registers = 2 | |
acc = AccMeanStd(eltype(xs), registers) | |
for i in eachindex(xs) | |
acc(xs[i]) | |
mean_std = acc() | |
str = string(" mean of median of 3 at index ", i, " = ", mean_std[1]) | |
println(str) | |
str = string(" standard deviation at index ", i, " = ", mean_std[2]) | |
println(str) | |
println("") | |
end |
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