Implement an algorithm to compare the provenance from two (or more) trials (i.e., executions of an experiment) to check their reproducibility. The provenance stored in the relational (sqlite) database by noWorkflow 2 contains intermediate variable values from a trial. These values could be compared to check how much or where executions deviate from each other.
MIT: https://github.com/gems-uff/noworkflow/blob/master/LICENSE
| from math import log2 | |
| from collections import deque | |
| from bisect import bisect_right | |
| class Memory: | |
| def __init__(self, f): | |
| self.func = f | |
| self.xs = deque() | |
| #self.pos = deque() |
| # This script is a simple remake of TcNo-Acc-Switcher for epic launcher | |
| # I made it to avoid installing a third party software that could manage sensitive account data | |
| # Original configuraton: https://github.com/TcNobo/TcNo-Acc-Switcher/blob/e36fe87a3e96a23e5a56447c6407121a6245c3aa/TcNo-Acc-Switcher-Server/Platforms.json | |
| import os | |
| import shutil | |
| import json | |
| import winreg | |
| import psutil |
| # Copyright (c) Universidade Federal Fluminense (UFF) | |
| # Copyright (c) NYU Tandon School of Engineering | |
| # This file uses part of noWorkflow 1 and 2. Please, check the LICENSE file the repository: | |
| # https://github.com/gems-uff/noworkflow | |
| """Definition provenance collector | |
| Uses noWorkflow to collect definition provenance | |
| """ | |
| import sys | |
| import argparse |
| -- this is an example | |
| group: empresa | |
| Empregado = { | |
| pnome minicial unome ssn datanasc endereco sexo salario superssn dno | |
| John B Smith 123456789 1965-01-09 "731 Fondren, Houston, TX" M 30000 333445555 5 | |
| Frankin T Wong 333445555 1955-12-08 "658 Voss, Houston, TX" M 40000 888665555 5 | |
| Alicia J Zelaya 99988777 1968-01-19 "3321 Castle, Soring, TX" F 25000 987654321 4 | |
| Jennifer S Wallace 987654321 1941-06-20 "291 Berry, Bellaire, TX" F 43000 8886655555 4 | |
| Ramesh K Narayan 666884444 1962-09-15 "975 Fire Oak, Humble, TX" M 38000 333445555 5 |
| group: CEDERJ - Cliente, Emprestimo, Livro | |
| description: Tabelas para resolucao da AD1 do CEDERJ | |
| Cliente = { | |
| cid, cnome, cend | |
| 1, 'Alice', 'Rua dos Cravos 22' | |
| 2, 'Lucas', 'Travessa José Vieira de Morais 373' | |
| 3, 'Caio', 'Rua Hugo Cenedesi 1689' | |
| 4, 'Daniela', 'Rua Vinte e Cinco 417' |
| group: CEDERJ - Usuario, Duvida, Resposta | |
| description: Tabelas para resolucao da APX1 do CEDERJ | |
| Usuario = { | |
| CodUsuario, Nome | |
| 1, 'Alice' | |
| 2, 'Lucas' | |
| 3, 'Caio' | |
| 4, 'Daniela' |
| import re | |
| import argparse | |
| from time import sleep | |
| from string import ascii_letters | |
| import keyboard # using module keyboard | |
| import pyperclip | |
| import bibtexparser | |
| from bibtexparser.bparser import BibTexParser | |
| from bibtexparser.customization import convert_to_unicode |