Created
September 29, 2021 19:29
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Simulations in SAS
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data IB; | |
do sim=1; | |
do dose=0,20,40,60,80,100,160 ; | |
do pen=1 to 100; | |
if dose=0 then Y=200 + rand("Normal", 0, sqrt(480.779)); | |
if dose=20 then Y=304 + rand("Normal", 0, sqrt(480.779)); | |
if dose=40 then Y=317 + rand("Normal", 0, sqrt(480.779)); | |
if dose=60 then Y=321 + rand("Normal", 0, sqrt(480.779)); | |
if dose=80 then Y=326 + rand("Normal", 0, sqrt(480.779)); | |
if dose=100 then Y=332 + rand("Normal", 0, sqrt(480.779)); | |
if dose=160 then Y=332 + rand("Normal", 0, sqrt(480.779)); /* 332 is assumption */ | |
output; | |
end; | |
end; | |
end; | |
run; | |
proc nlin data=IB plots=all maxiter=20 hougaard nlinmeasures bias; | |
where sim=1; | |
parms a=314 k=0.06 T=-15; | |
model Y=a*exp(-exp(-k*(Dose-T))); | |
output out=IBpred p=yhat r=resid student=stresid lcl=lpl lclm=lcl ucl=upl uclm=ucl parms=a k T; | |
run; /* a=347 / k=0.00975 / T=-205.4 */ | |
proc sgplot data=IBpred; | |
scatter y=Y x=dose; | |
series y=yhat x=dose / name="fit" lineattrs=(color=red pattern=2) LegendLabel="Predicted"; | |
series y=lpl x=dose / lineattrs=GraphConfidence name="lpl" legendlabel="95% Prediction limits"; | |
series y=upl x=dose / lineattrs=GraphConfidence; | |
band x=dose lower=lcl upper=ucl / fillattrs=(color=red) name="lcl" legendlabel="95% Confidence limits" transparency=0.75; | |
refline k / axis=x lineattrs=(color=orange pattern=2) label="Inflection Point" labelpos=max labelloc=outside labelattrs=(color=orange) ; | |
refline a / axis=y lineattrs=(color=green pattern=2) label="Asymptot" labelpos=max labelloc=inside labelattrs=(color=green); | |
keylegend "fit" "lpl" "lcl"; | |
yaxis label="Y "; | |
xaxis label="Day "; | |
Title "Gompertz to describe Y "; | |
run; |
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