Skip to content

Instantly share code, notes, and snippets.

View MarkDunne's full-sized avatar

Mark Dunne MarkDunne

  • London
View GitHub Profile
We can't make this file beautiful and searchable because it's too large.
entrez symbol description locus hprd hgnc mim refpro refdna ensembl uniprot cancer cancer_type cancer_dom cancer_rec duplicability origin mirna function chromosome tstart tend aliases main_refseq duplicability_main_refseq potential_false_positive primary_sites degree betweenness clustering complexes
25 ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 9q34.1 1809 76 189980 NP_005148;NP_009297 NM_005157;NM_007313 ENSP00000361423 P00519 TRUE cgc 1 0 0 Eukaryotes 3 Cell cycle,Cellular metabolism,Cellular processes,DNA/RNA metabolism and transcription,Development,Regulation of intracellular processes and metabolism,Regulation of transcription,Signal transduction chr9 133589707 133761067 |JTK7|bcr/abl|c-ABL|c-ABL1|v-abl| NP_009297 0 FALSE 1 337 583638 0.0440 9
27 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 1q25.2 1259 77 164690 NP_001129472;NP_001129473;NP_001161708;NP_001161709;NP_001161710;NP_001161711;NP_005149;NP_009298;XP_005245145 NM_001136000;NM_001136001;NM_001168236;NM_001168237;NM_00116
### Keybase proof
I hereby claim:
* I am markdunne on github.
* I am markdunne (https://keybase.io/markdunne) on keybase.
* I have a public key ASCeU8VsbwFu2un_yF94AeTEjgIkzH1GITejQccIt1XzqQo
To claim this, I am signing this object:
@MarkDunne
MarkDunne / scraper.py
Created March 8, 2017 09:50
Scraper for food hygiene dataset
import requests
import pandas as pd
from bs4 import BeautifulSoup
categories = {
'7846': 'Mobile caterer',
'7838': 'Farmers/growers',
'14': 'Importers/Exporters',
'7843': 'Pub/bar/nightclub',
'4613': 'Retailers - other',
Date symbol Negative Positive CloseClass
12 2000-01-11 AXP 0.0 1.0 Gain
81 2000-04-13 AXP 0.0 0.0 Loss
128 2000-06-01 AXP 0.0 0.0 Loss
172 2000-07-21 AXP 0.0 1.0 Gain
205 2000-09-14 AXP 0.0 0.0 Loss
220 2000-09-29 AXP 0.0 1.0 Loss
231 2000-10-11 AXP 0.0 0.0 Loss
233 2000-10-12 AXP 0.0 1.0 Loss
282 2000-12-04 AXP 1.0 0.0 Loss
@MarkDunne
MarkDunne / lichess-ratings.py
Last active September 13, 2017 20:15
Lichess player ratings histogram
import time
import json
import urllib2
import matplotlib.pyplot as plt
# change this to something big, hundreds or thousands
n_users = 10
chess960 = []
blitz = []
@MarkDunne
MarkDunne / Assignments.hs
Last active December 27, 2015 18:59
Assignments 1 to 3 for CS4620
--Assignment 1
--Q1
and' :: [Bool] -> Bool
and' xs = foldl (&&) True xs
--Q2
or' :: [Bool] -> Bool
or' xs = foldl (||) False xs
--Q3