output of: "gem check -a"

[root@server ~] gem check -a

Performing the 'alien' operation
flog-1.1.0 is error-free
 
jscruggs-metric_fu-0.8.0 has 1 problems
  lib/tasks/metric_fu.rake:
  installed file doesn't match original from gem
 
 
rails-2.1.0 is error-free
 
activeresource-2.1.0 is error-free
 
rmagick-1.15.14 has 1 problems
  /opt/ruby-enterprise-1.8.6-20080709/lib/ruby/gems/1.8/cache/rmagick-1.15.14.gem:
  Unmanaged files in gem: ["ext/RMagick/extconf.rb", "ext/RMagick/RMagick.so", "ext/RMagick/rmimage.o", "ext/RMagick/rmdraw.o", "ext/RMagick/rminfo.o", "ext/RMagick/rmutil.o", "ext/RMagick/Makefile", "ext/RMagick/rmmain.o", "ext/RMagick/rmagick_config.h", "ext/RMagick/rmilist.o", "ext/RMagick/rmfill.o", "lib/RMagick.so", ".require_paths", "config.status", "metaconfig", "Makefile", ".config", "doc/polaroid.rb.html", "doc/arcs02.rb.html", "doc/circle01.rb.html", "doc/arcs01.rb.html", "doc/smile.rb.html", "doc/ex/rotate.gif", "doc/ex/cbezier1.gif", "doc/ex/shadow_after.gif", "doc/ex/rect02.gif", "doc/ex/matte_floodfill_after.gif", "doc/ex/polygon.gif", "doc/ex/enhance.jpg", "doc/ex/matte_floodfill_before.gif", "doc/ex/color_fill_to_border_before.gif", "doc/ex/nested_rvg.gif", "doc/ex/coalesce.gif", "doc/ex/line.gif", "doc/ex/PreserveAspectRatio.gif", "doc/ex/contrast.jpg", "doc/ex/Use03.gif", "doc/ex/preview.jpg", "doc/ex/add_noise_UniformNoise.jpg", "doc/ex/level.jpg", "doc/ex/grav.gif", "doc/ex/tspan03.gif", "doc/ex/text_antialias.gif", "doc/ex/rvg_opacity.gif", "doc/ex/circle.gif", "doc/ex/add_noise_MultiplicativeGaussianNoise.jpg", "doc/ex/wave.jpg", "doc/ex/RotateScale.gif", "doc/ex/Use02.gif", "doc/ex/arcs01.gif", "doc/ex/color_floodfill_after.gif", "doc/ex/baseline_shift01.gif", "doc/ex/ellipse.gif", "doc/ex/arcs02.gif", "doc/ex/rectangle.gif", "doc/ex/matte_fill_to_border_after.gif", "doc/ex/unsharp_mask.jpg", "doc/ex/trim_after.jpg", "doc/ex/Use01.gif", "doc/ex/emboss.jpg", "doc/ex/splice.jpg", "doc/ex/rvg_linecap.gif", "doc/ex/color_floodfill_before.gif", "doc/ex/rubyname.gif", "doc/ex/line01.gif", "doc/ex/add_noise_PoissonNoise.jpg", "doc/ex/charcoal.jpg", "doc/ex/affine.gif", "doc/ex/affine_transform.jpg", "doc/ex/roundrect.gif", "doc/ex/path.gif", "doc/ex/radial_blur.jpg", "doc/ex/add_noise_LaplacianNoise.jpg", "doc/ex/translate.gif", "doc/ex/edge.jpg", "doc/ex/negate_channel.jpg", "doc/ex/pattern1.gif", "doc/ex/skewy.gif", "doc/ex/map_before.jpg", "doc/ex/shear.jpg", "doc/ex/circle01.gif", "doc/ex/font_styles.gif", "doc/ex/modulate.jpg", "doc/ex/matte_fill_to_border_before.gif", "doc/ex/tspan02.gif", "doc/ex/color_fill_to_border_after.gif", "doc/ex/cbezier6.gif", "doc/ex/shave.jpg", "doc/ex/rect01.gif", "doc/ex/group.gif", "doc/ex/axes.gif", "doc/ex/NewCoordSys.gif", "doc/ex/InitialCoords.gif", "doc/ex/triangle01.gif", "doc/ex/mask.jpg", "doc/ex/chop_before.jpg", "doc/ex/colors.miff", "doc/ex/raise.jpg", "doc/ex/crop_resized.jpg", "doc/ex/ordered_dither.jpg", "doc/ex/polyline.gif", "doc/ex/writing_mode02.gif", "doc/ex/arcpath.gif", "doc/ex/watermark.jpg", "doc/ex/quad01.gif", "doc/ex/texturefill.gif", "doc/ex/hatchfill.gif", "doc/ex/crop_with_gravity.miff", "doc/ex/rotate_f.jpg", "doc/ex/stroke_linecap.gif", "doc/ex/channel.jpg", "doc/ex/cycle_colormap.gif", "doc/ex/stroke_fill.gif", "doc/ex/stroke_width.gif", "doc/ex/spread.jpg", "doc/ex/crop_before.jpg", "doc/ex/mono.jpg", "doc/ex/Skew.gif", "doc/ex/polyline01.gif", "doc/ex/coalesce_anim.gif", "doc/ex/color_reset.gif", "doc/ex/text01.gif", "doc/ex/sepiatone.jpg", "doc/ex/segment.jpg", "doc/ex/constitute.jpg", "doc/ex/add_noise_ImpulseNoise.jpg", "doc/ex/dissolve.jpg", "doc/ex/cbezier5.gif", "doc/ex/ViewBox_300x200.gif", "doc/ex/median_filter.jpg", "doc/ex/map_f.jpg", "doc/ex/colorize.jpg", "doc/ex/polaroid.jpg", "doc/ex/roll.jpg", "doc/ex/stroke_linejoin.gif", "doc/ex/transverse.jpg", "doc/ex/shadow_before.gif", "doc/ex/transparent_after.gif", "doc/ex/average_before.gif", "doc/ex/rvg_pattern.gif", "doc/ex/matte_replace_before.gif", "doc/ex/drop_shadow.gif", "doc/ex/cbezier2.gif", "doc/ex/writing_mode01.gif", "doc/ex/ellipse01.gif", "doc/ex/qbezierpath.gif", "doc/ex/evenodd.gif", "doc/ex/.examples", "doc/ex/texture_fill_to_border_after.gif", "doc/ex/gradientfill.gif", "doc/ex/random_threshold_channel.jpg", "doc/ex/texture_fill_to_border_before.gif", "doc/ex/crop_after.jpg", "doc/ex/wet_floor.gif", "doc/ex/ViewBox_150x200.gif", "doc/ex/border.jpg", "doc/ex/negate.jpg", "doc/ex/swirl.gif", "doc/ex/trim_before.jpg", "doc/ex/flop.jpg", "doc/ex/get_pixels.jpg", "doc/ex/tref01.gif", "doc/ex/pattern2.gif", "doc/ex/colors.gif", "doc/ex/threshold.jpg", "doc/ex/equalize.jpg", "doc/ex/pixels-array", "doc/ex/texture_floodfill_after.gif", "doc/ex/OrigCoordSys.gif", "doc/ex/tspan01.gif", "doc/ex/chop_after.jpg", "doc/ex/cubic02.gif", "doc/ex/smile.gif", "doc/ex/stroke_dasharray.gif", "doc/ex/morph.gif", "doc/ex/add_noise_GaussianNoise.jpg", "doc/ex/skewx.gif", "doc/ex/mosaic.gif", "doc/ex/solarize.jpg", "doc/ex/text_undercolor.gif", "doc/ex/get_multiline_type_metrics.gif", "doc/ex/normalize.jpg", "doc/ex/polygon01.gif", "doc/ex/opacity.gif", "doc/ex/vignette.jpg", "doc/ex/sketch.jpg", "doc/ex/rvg_clippath.gif", "doc/ex/map_after.jpg", "doc/ex/posterize.jpg", "doc/ex/motion_blur.jpg", "doc/ex/rvg_linejoin.gif", "doc/ex/text.gif", "doc/ex/flip.jpg", "doc/ex/composite.gif", "doc/ex/adaptive_threshold.jpg", "doc/ex/image.gif", "doc/ex/cbezier4.gif", "doc/ex/viewex.gif", "doc/ex/to_blob.gif", "doc/ex/transpose.jpg", "doc/ex/transparent_before.gif", "doc/ex/color_histogram.gif", "doc/ex/clip_path.gif", "doc/ex/nonzero.gif", "doc/ex/text_align.gif", "doc/ex/rm_gravity_out.miff", "doc/ex/arc.gif", "doc/ex/get_type_metrics.gif", "doc/ex/oil_paint.jpg", "doc/ex/bounding_box.gif", "doc/ex/cbezier3.gif", "doc/ex/rvg_stroke_dasharray.gif", "doc/ex/gaussian_blur.jpg", "doc/ex/flatten_images.gif", "doc/ex/implode.gif", "doc/ex/average_after.gif", "doc/ex/blur_image.jpg", "doc/ex/frame.jpg", "doc/ex/reduce_noise.jpg", "doc/ex/bilevel_channel.jpg", "doc/ex/shade.jpg", "doc/ex/texture_floodfill_before.gif", "doc/ex/text_styles.gif", "doc/ex/cubic01.gif", "doc/ex/matte_replace_after.gif", "doc/cbezier5.rb.html", "doc/RotateScale.rb.html", "doc/color_histogram.rb.html", "doc/random_threshold_channel.rb.html", "doc/edge.rb.html", "doc/mono.rb.html", "doc/get_pixels.rb.html", "doc/polygon01.rb.html", "doc/ordered_dither.rb.html", "doc/composite.rb.html", "doc/triangle01.rb.html", "doc/polygon.rb.html", "doc/skewx.rb.html", "doc/map.rb.html", "doc/qbezierpath.rb.html", "doc/skewy.rb.html", "doc/ellipse.rb.html", "doc/tspan03.rb.html", "doc/implode.rb.html", "doc/threshold.rb.html", "doc/affine_transform.rb.html", "doc/color_fill_to_border.rb.html", "doc/chop.rb.html", "doc/arc.rb.html", "doc/matte_floodfill.rb.html", "doc/baseline_shift01.rb.html", "doc/pattern1.rb.html", "doc/rvg_linecap.rb.html", "doc/pattern2.rb.html", "doc/arcpath.rb.html", "doc/OrigCoordSys.rb.html", "doc/mask.rb.html", "doc/matte_fill_to_border.rb.html", "doc/unsharp_mask.rb.html", "doc/Adispatch.rb.html", "doc/preview.rb.html", "doc/cbezier6.rb.html", "doc/rvg_opacity.rb.html", "doc/viewex.rb.html", "doc/average.rb.html", "doc/negate_channel.rb.html", "doc/swirl.rb.html", "doc/text.rb.html", "doc/modulate.rb.html", "doc/translate.rb.html", "doc/rvg_pattern.rb.html", "doc/shadow.rb.html", "doc/level.rb.html", "doc/flatten_images.rb.html", "doc/segment.rb.html", "doc/tref01.rb.html", "doc/line.rb.html", "doc/color_reset.rb.html", "doc/coalesce.rb.html", "doc/shave.rb.html", "doc/drawcomp.rb.html", "doc/tspan02.rb.html", "doc/InitialCoords.rb.html", "doc/to_blob.rb.html", "doc/crop_resized.rb.html", "doc/text_align.rb.html", "doc/evenodd.rb.html", "doc/blur_image.rb.html", "doc/sketch.rb.html", "doc/cycle_colormap.rb.html", "doc/channel.rb.html", "doc/solarize.rb.html", "doc/text_styles.rb.html", "doc/rect02.rb.html", "doc/stroke_linecap.rb.html", "doc/radial_blur.rb.html", "doc/map_f.rb.html", "doc/rect01.rb.html", "doc/median_filter.rb.html", "doc/cbezier4.rb.html", "doc/tspan01.rb.html", "doc/mosaic.rb.html", "doc/crop.rb.html", "doc/shear.rb.html", "doc/text_undercolor.rb.html", "doc/posterize.rb.html", "doc/texturefill.rb.html", "doc/flip.rb.html", "doc/roll.rb.html", "doc/enhance.rb.html", "doc/gaussian_blur.rb.html", "doc/gravity.rb.html", "doc/raise.rb.html", "doc/dissolve.rb.html", "doc/cbezier3.rb.html", "doc/colorize.rb.html", "doc/rectangle.rb.html", "doc/texture_fill_to_border.rb.html", "doc/NewCoordSys.rb.html", "doc/group.rb.html", "doc/text_antialias.rb.html", "doc/equalize.rb.html", "doc/normalize.rb.html", "doc/vignette.rb.html", "doc/transparent.rb.html", "doc/frame.rb.html", "doc/nested_rvg.rb.html", "doc/stegano.rb.html", "doc/emboss.rb.html", "doc/opacity.rb.html", "doc/add_noise.rb.html", "doc/stroke_linejoin.rb.html", "doc/stroke_fill.rb.html", "doc/rvg_clippath.rb.html", "doc/polyline01.rb.html", "doc/writing_mode02.rb.html", "doc/border.rb.html", "doc/path.rb.html", "doc/rotate.rb.html", "doc/clip_path.rb.html", "doc/writing_mode01.rb.html", "doc/ellipse01.rb.html", "doc/cbezier2.rb.html", "doc/rvg_linejoin.rb.html", "doc/splice.rb.html", "doc/line01.rb.html", "doc/affine.rb.html", "doc/texture_floodfill.rb.html", "doc/stroke_dasharray.rb.html", "doc/oil_paint.rb.html", "doc/negate.rb.html", "doc/color_floodfill.rb.html", "doc/get_multiline_type_metrics.rb.html", "doc/grav.rb.html", "doc/bounding_box.rb.html", "doc/cubic02.rb.html", "doc/gradientfill.rb.html", "doc/text01.rb.html", "doc/font_styles.rb.html", "doc/morph.rb.html", "doc/flop.rb.html", "doc/circle.rb.html", "doc/adaptive_threshold.rb.html", "doc/Use03.rb.html", "doc/Zconstitute.rb.html", "doc/charcoal.rb.html", "doc/reduce_noise.rb.html", "doc/stroke_width.rb.html", "doc/cbezier1.rb.html", "doc/hatchfill.rb.html", "doc/matte_replace.rb.html", "doc/fonts.rb.html", "doc/spread.rb.html", "doc/shade.rb.html", "doc/ViewBox.rb.html", "doc/PreserveAspectRatio.rb.html", "doc/cubic01.rb.html", "doc/rubyname.rb.html", "doc/wet_floor.rb.html", "doc/trim.rb.html", "doc/quantize-m.rb.html", "doc/axes.rb.html", "doc/watermark.rb.html", "doc/polyline.rb.html", "doc/roundrect.rb.html", "doc/nonzero.rb.html", "doc/colors.rb.html", "doc/wave.rb.html", "doc/drop_shadow.rb.html", "doc/get_type_metrics.rb.html", "doc/transverse.rb.html", "doc/image.rb.html", "doc/transpose.rb.html", "doc/sepiatone.rb.html", "doc/rotate_f.rb.html", "doc/quad01.rb.html", "doc/Use02.rb.html", "doc/rvg_stroke_dasharray.rb.html", "doc/crop_with_gravity.rb.html", "doc/Use01.rb.html", "doc/motion_blur.rb.html", "doc/Skew.rb.html", "doc/bilevel_channel.rb.html", "doc/contrast.rb.html", "config.log", "InstalledFiles"]
 
 
mongrel-1.1.5 has 1 problems
  /opt/ruby-enterprise-1.8.6-20080709/lib/ruby/gems/1.8/cache/mongrel-1.1.5.gem:
  Unmanaged files in gem: ["ext/http11/mkmf.log", "ext/http11/http11.so", "ext/http11/Makefile", "ext/http11/http11_parser.o", "ext/http11/http11.o", "lib/http11.so", ".require_paths"]
 
 
hoe-1.8.0 is error-free
 
rcov-0.8.1.2.0 has 1 problems
  /opt/ruby-enterprise-1.8.6-20080709/lib/ruby/gems/1.8/cache/rcov-0.8.1.2.0.gem:
  Unmanaged files in gem: ["ext/rcovrt/rcovrt.o", "ext/rcovrt/rcovrt.so", "ext/rcovrt/Makefile", "ext/rcovrt/callsite.o", "lib/rcovrt.so"]
 
 
actionpack-2.1.0 is error-free
 
mocha-0.9.1 is error-free
 
ohcount-1.0.2 has 1 problems
  /opt/ruby-enterprise-1.8.6-20080709/lib/ruby/gems/1.8/cache/ohcount-1.0.2.gem:
  Unmanaged files in gem: ["ext/ohcount_native/parser.o", "ext/ohcount_native/mkmf.log", "ext/ohcount_native/state.o", "ext/ohcount_native/language_breakdown.o", "ext/ohcount_native/polyglots.o", "ext/ohcount_native/compiled_state.o", "ext/ohcount_native/ohcount_native.so", "ext/ohcount_native/Makefile", "ext/ohcount_native/common.o", "ext/ohcount_native/ruby_binding.o", "ext/ohcount_native/polyglot.o", "lib/ohcount_native.so", ".require_paths"]
 
 
RubyInline-3.7.0 is error-free
 
actionmailer-2.1.0 is error-free
 
rack-0.3.0 is error-free
 
kwala-0.9.1 has 1 problems
  lib/kwala/actions/flagged_comments.rb:
  installed file doesn't match original from gem
 
 
activerecord-2.1.0 is error-free
 
passenger-2.0.2 has 1 problems
  /opt/ruby-enterprise-1.8.6-20080709/lib/ruby/gems/1.8/cache/passenger-2.0.2.gem:
  Unmanaged files in gem: ["ext/apache2/mod_passenger.so", "ext/apache2/Bucket.o", "ext/apache2/Hooks.o", "ext/apache2/System.o", "ext/apache2/Utils.o", "ext/apache2/Configuration.o", "ext/apache2/ApplicationPoolServerExecutable", "ext/apache2/mod_passenger.o", "ext/apache2/Logging.o", "ext/boost/src/exceptions.o", "ext/boost/src/once.o", "ext/boost/src/libboost_thread.a", "ext/boost/src/tss_null.o", "ext/boost/src/thread.o", "ext/passenger/native_support.so", "ext/passenger/Makefile", "ext/passenger/native_support.o", "lib/ext/native_support.so", ".require_paths"]
 
 
daemons-1.0.10 is error-free
 
rake-0.8.1 is error-free
 
cgi_multipart_eof_fix-2.5.0 is error-free
 
gem_plugin-0.2.3 is error-free
 
activesupport-2.1.0 is error-free
 
fastthread-1.0.1 has 1 problems
  /opt/ruby-enterprise-1.8.6-20080709/lib/ruby/gems/1.8/cache/fastthread-1.0.1.gem:
  Unmanaged files in gem: ["ext/fastthread/fastthread.o", "ext/fastthread/Makefile", "ext/fastthread/fastthread.so", "lib/fastthread.so", ".require_paths"]
 
 
rake-0.8.3 is error-free
 
mysql-2.7 has 1 problems
  /opt/ruby-enterprise-1.8.6-20080709/lib/ruby/gems/1.8/cache/mysql-2.7.gem:
  Unmanaged files in gem: ["mysql.o", "lib/mysql.so", "mkmf.log", "mysql.c", "Makefile", "mysql.so"]
 
 
ParseTree-2.2.0 has 1 problems
  /opt/ruby-enterprise-1.8.6-20080709/lib/ruby/gems/1.8/cache/ParseTree-2.2.0.gem:
  Unmanaged files in gem: [".require_paths"]
 
 
rubyforge-1.0.0 is error-free