Nazrath10R
/ gist:3d8bc474366e5f8343d3616fb5eb0817
Created
September 25, 2018 00:40
bash for loop through an array with with args
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| for i in "${PXD[@]}" | |
| do | |
| echo "$i" | |
| Rscript $SCRIPTS/parser_argumented.R --PXD "$i" | |
| done |
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| function print_time { | |
| END=$(date +%s) | |
| DIFF=$(( $END - $1 )) | |
| dd=$(echo "$DIFF/86400" | bc) | |
| dt2=$(echo "$DIFF-86400*$dd" | bc) | |
| dh=$(echo "$dt2/3600" | bc) | |
| dt3=$(echo "$dt2-3600*$dh" | bc) | |
| dm=$(echo "$dt3/60" | bc) | |
| ds=$(echo "$dt3-60*$dm" | bc) | |
| if [ $dd -gt 0 ]; then |
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| if ls /data/*cspsx 1> /dev/null 2>&1; then | |
| echo "files do exist" | |
| else | |
| echo "files do not exist" | |
| exit 1 | |
| fi |
Nazrath10R
/ gist:b98ffad1d773e7c57bf9b773d462fe84
Created
September 25, 2018 00:37
data filtration: find lines with specific words in a table fast, e.g "LINE-1"
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| awk '/LINE-1|LINE_1/ { print $0 }' $x > ${x%.txt}_LINE_filtered.txt |
Nazrath10R
/ gist:5c032806bec1edbe04aa3157a3b21c91
Created
September 25, 2018 00:37
move everything with name + extension into new folder, e.g final
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| find . -name 'BLA*.txt' -exec mv -it ../final {} + |
Nazrath10R
/ gist:e7bf8cd97a3ac1415b3d7033e9317925
Created
September 25, 2018 00:36
count files in subfolder
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| RESULT_FOLDERS=`find /$DIR/ -maxdepth 1 -type d -print| wc -l` |
Nazrath10R
/ gist:9a5ecd6f734248ea93be5610fff7d03f
Created
September 25, 2018 00:36
echo change colour - blue
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| echo -en "\033[34m" | |
| echo "Hello world" | |
| echo -en "\033[0m" |
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| #### loading bar | |
| x=$1 | |
| echo -ne ' (0%)\r' | |
| # sleep `bc <<< "scale=2; $x/10"` | |
| echo -ne '██ (10%)\r' | |
| sleep `bc <<< "scale=2; $x/10"` | |
| echo -ne '████ (20%)\r' | |
| sleep `bc <<< "scale=2; $x/10"` | |
| echo -ne '██████ (30%)\r' |