Orbifold

Orbifold

require('dotenv').config()
const { Configuration, OpenAIApi } = require("openai");
const neo4j = require('neo4j-driver')
const driver = neo4j.driver(process.env.NEO4JURI, neo4j.auth.basic(process.env.NEO4JUSER, process.env.NEO4JPASSWORD))
const session = driver.session({ database: "biodb" })
const configuration = new Configuration({
    apiKey: process.env.OPENAI_API_KEY
});
const openai = new OpenAIApi(configuration);
let isConfidential = false;

Orbifold

Orbifold

use global
CREATE VERTEX Gene (PRIMARY_ID Id STRING) With primary_id_as_attribute="true"
CREATE VERTEX Compound (PRIMARY_ID Id STRING) With primary_id_as_attribute="true"
CREATE VERTEX Disease (PRIMARY_ID Id STRING) With primary_id_as_attribute="true"
CREATE VERTEX Atc (PRIMARY_ID Id STRING) With primary_id_as_attribute="true"
CREATE VERTEX Tax (PRIMARY_ID Id STRING) With primary_id_as_attribute="true"
CREATE VERTEX BiologicalProcess (PRIMARY_ID Id STRING) With primary_id_as_attribute="true"
CREATE VERTEX Symptom (PRIMARY_ID Id STRING) With primary_id_as_attribute="true"
CREATE VERTEX Anatomy (PRIMARY_ID Id STRING) With primary_id_as_attribute="true"
CREATE VERTEX MolecularFunction (PRIMARY_ID Id STRING) With primary_id_as_attribute="true"

Orbifold

(* Content-type: application/vnd.wolfram.mathematica *)

(*** Wolfram Notebook File ***)
(* http://www.wolfram.com/nb *)

(* CreatedBy='Mathematica 12.3' *)

(*CacheID: 234*)
(* Internal cache information:
NotebookFileLineBreakTest

Orbifold

Orbifold

import org.apache.spark.sql.Dataset
import org.apache.spark.sql.Row
import org.apache.spark.sql.SparkSession

public fun main() {
    val session = SparkSession.Builder()
        .appName("Swa Spark")
        .master("local")
        .orCreate
    val df: Dataset<Row> = session.read().format("csv")

Orbifold

Orbifold

Orbifold