optimised_resistance_scoring_plotting

optimised_resistance_scoring_plotting.py

fig, ax = plt.subplots(figsize=(14, 16))

res_geo.plot(ax=ax, figsize=(14, 16), column=res_geo['resistance_scores'], cmap='cool', k=6,
            missing_kwds=dict(color="lightgrey",label='No Data/<10 isolates'),
            scheme='FisherJenks',
            edgecolor = 'black',
            legend=True, 
            linewidth = 0.1,
            legend_kwds=dict(loc='lower left', frameon=False, title='Resistance Scores'))

ax.set(title='Global Antibiotic Resistance in the Bacterium K. pneumoniae')
ax.set_axis_off()


plt.show()