Created
November 22, 2016 15:06
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Weighted samping in python 2 and 3. Released under CC0.
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#!/usr/bin/env python | |
# -*- coding: utf-8 -*- | |
from __future__ import print_function | |
import random | |
def get_weighted_sample(values, weights, return_index = False): | |
cum = [] | |
tot = 0.0 | |
for w in weights: | |
if w < 0.0: | |
raise RuntimeError("Weights cannot be negative") | |
tot += w | |
cum.append(tot) | |
if tot <= 0.0: | |
raise RuntimeError("Total weight must be positive") | |
r = random.random() * tot | |
lastNonZeroInd = None | |
for ind, (cw, w) in enumerate(zip(cum, weights)): | |
if r < cw: | |
if return_index: | |
return ind | |
return values[ind] | |
if w > 0.0: | |
lastNonZeroInd = ind | |
if return_index: | |
return lastNonZeroInd | |
return values[lastNonZeroInd] | |
if __name__ == '__main__': | |
import numpy as np | |
import matplotlib.pyplot as plt | |
values = [v + 5.0 for v in range(10)] | |
weights = [v / 10.0 for v in range(10)] | |
print (values) | |
print (weights) | |
samples = [] | |
for i in range(10000): | |
s = get_weighted_sample(values, weights, return_index=False) | |
samples.append(s) | |
freq = np.bincount(samples) | |
plt.plot(freq) | |
plt.show() |
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