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(partial) EasyBuild log for failed build of /apps/c3se-easyconfigs/PyTorch3D-0.7.8-foss-2023a-CUDA-12.1.1.eb
== 2024-10-30 19:32:46,058 environment.py:93 INFO Environment variable FFT_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so')
== 2024-10-30 19:32:46,058 environment.py:93 INFO Environment variable EBVARFFT_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so')
== 2024-10-30 19:32:46,058 environment.py:93 INFO Environment variable FFT_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so')
== 2024-10-30 19:32:46,058 environment.py:93 INFO Environment variable EBVARFFT_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so')
== 2024-10-30 19:32:46,058 environment.py:93 INFO Environment variable FFT_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a')
== 2024-10-30 19:32:46,058 environment.py:93 INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a')
== 2024-10-30 19:32:46,058 environment.py:93 INFO Environment variable FFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable EBVARFFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable FLIBS set to -lgfortran (previous value: '-lgfortran')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable EBVARFLIBS set to -lgfortran (previous value: '-lgfortran')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable LAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable EBVARLAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable LAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable EBVARLAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable EBVARLAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable EBVARLAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:46,059 environment.py:93 INFO Environment variable LDFLAGS set to -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64 -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64 -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib -L/apps/Test/software/GCCcore/12.3.0/lib64 -L/apps/Test/software/GCCcore/12.3.0/lib (previous value: '-L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64 -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64 -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib -L/apps/Test/software/GCCcore/12.3.0/lib64 -L/apps/Test/software/GCCcore/12.3.0/lib')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable EBVARLDFLAGS set to -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64 -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64 -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib -L/apps/Test/software/GCCcore/12.3.0/lib64 -L/apps/Test/software/GCCcore/12.3.0/lib (previous value: '-L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64 -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64 -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib -L/apps/Test/software/GCCcore/12.3.0/lib64 -L/apps/Test/software/GCCcore/12.3.0/lib')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable LIBBLAS set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable EBVARLIBBLAS set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable LIBBLAS_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable EBVARLIBBLAS_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable LIBFFT set to -lfftw3 (previous value: '-lfftw3')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable EBVARLIBFFT set to -lfftw3 (previous value: '-lfftw3')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable LIBFFT_MT set to -lfftw3 -lpthread (previous value: '-lfftw3 -lpthread')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable EBVARLIBFFT_MT set to -lfftw3 -lpthread (previous value: '-lfftw3 -lpthread')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable LIBLAPACK set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable EBVARLIBLAPACK set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable LIBLAPACK_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable EBVARLIBLAPACK_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable LIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:46,060 environment.py:93 INFO Environment variable LIBLAPACK_ONLY set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable EBVARLIBLAPACK_ONLY set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable LIBS set to -lm -lpthread (previous value: '-lm -lpthread')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable EBVARLIBS set to -lm -lpthread (previous value: '-lm -lpthread')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable LIBSCALAPACK set to -lscalapack -lflexiblas -lgfortran (previous value: '-lscalapack -lflexiblas -lgfortran')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable EBVARLIBSCALAPACK set to -lscalapack -lflexiblas -lgfortran (previous value: '-lscalapack -lflexiblas -lgfortran')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable LIBSCALAPACK_MT set to -lscalapack -lflexiblas -lgfortran -lpthread (previous value: '-lscalapack -lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable EBVARLIBSCALAPACK_MT set to -lscalapack -lflexiblas -lgfortran -lpthread (previous value: '-lscalapack -lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable LIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran (previous value: '-lscalapack -lgfortran')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable EBVARLIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran (previous value: '-lscalapack -lgfortran')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable LIBSCALAPACK_ONLY set to -lscalapack -lgfortran (previous value: '-lscalapack -lgfortran')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable EBVARLIBSCALAPACK_ONLY set to -lscalapack -lgfortran (previous value: '-lscalapack -lgfortran')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable MPICC set to mpicc (previous value: 'mpicc')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable EBVARMPICC set to mpicc (previous value: 'mpicc')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable MPICXX set to mpicxx (previous value: 'mpicxx')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable EBVARMPICXX set to mpicxx (previous value: 'mpicxx')
== 2024-10-30 19:32:46,061 environment.py:93 INFO Environment variable MPIF77 set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable EBVARMPIF77 set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable MPIF90 set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable EBVARMPIF90 set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable MPIFC set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable EBVARMPIFC set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable MPI_INC_DIR set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/include (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/include')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable EBVARMPI_INC_DIR set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/include (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/include')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable MPI_LIB_DIR set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64 (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable EBVARMPI_LIB_DIR set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64 (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable MPI_LIB_SHARED set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable EBVARMPI_LIB_SHARED set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable MPI_LIB_STATIC set to (previous value: '')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable EBVARMPI_LIB_STATIC set to (previous value: '')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable OMPI_CC set to gcc (previous value: 'gcc')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable EBVAROMPI_CC set to gcc (previous value: 'gcc')
== 2024-10-30 19:32:46,062 environment.py:93 INFO Environment variable OMPI_CXX set to g++ (previous value: 'g++')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable EBVAROMPI_CXX set to g++ (previous value: 'g++')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable OMPI_F77 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable EBVAROMPI_F77 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable OMPI_F90 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable EBVAROMPI_F90 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable OMPI_FC set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable EBVAROMPI_FC set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable OPTFLAGS set to -O2 -ftree-vectorize -march=native (previous value: '-O2 -ftree-vectorize -march=native')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable EBVAROPTFLAGS set to -O2 -ftree-vectorize -march=native (previous value: '-O2 -ftree-vectorize -march=native')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable PRECFLAGS set to -fno-math-errno (previous value: '-fno-math-errno')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable EBVARPRECFLAGS set to -fno-math-errno (previous value: '-fno-math-errno')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable SCALAPACK_INC_DIR set to (previous value: '')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable EBVARSCALAPACK_INC_DIR set to (previous value: '')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable SCALAPACK_LIB_DIR set to /apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib (previous value: '/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable EBVARSCALAPACK_LIB_DIR set to /apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib (previous value: '/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib')
== 2024-10-30 19:32:46,063 environment.py:93 INFO Environment variable SCALAPACK_MT_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:46,064 environment.py:93 INFO Environment variable EBVARSCALAPACK_MT_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:46,064 environment.py:93 INFO Environment variable SCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:46,064 environment.py:93 INFO Environment variable EBVARSCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:46,064 environment.py:93 INFO Environment variable SCALAPACK_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so (previous value: 'libscalapack.so,libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:46,064 environment.py:93 INFO Environment variable EBVARSCALAPACK_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so (previous value: 'libscalapack.so,libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:46,064 environment.py:93 INFO Environment variable SCALAPACK_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a (previous value: 'libscalapack.a,libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:46,064 environment.py:93 INFO Environment variable EBVARSCALAPACK_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a (previous value: 'libscalapack.a,libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:46,064 filetools.py:528 INFO Command python found at /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python
== 2024-10-30 19:32:46,065 pythonpackage.py:553 INFO Python command being used: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python
== 2024-10-30 19:32:46,065 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:46,065 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:46,150 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'
== 2024-10-30 19:32:46,150 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'
== 2024-10-30 19:32:46,376 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:46,377 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:46,454 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'
== 2024-10-30 19:32:46,454 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'
== 2024-10-30 19:32:46,683 filetools.py:1924 INFO Creating directory /dev/shm/PyTorch3D/0.7.8/foss-2023a-CUDA-12.1.1/lpips (parents: True, set_gid: False, sticky: False)
== 2024-10-30 19:32:46,683 run.py:251 INFO Using /bin/bash as shell for running cmd: tar xzf /apps/sources/p/PyTorch3D/extensions/lpips-0.1.4.tar.gz
== 2024-10-30 19:32:46,684 run.py:260 INFO running cmd: tar xzf /apps/sources/p/PyTorch3D/extensions/lpips-0.1.4.tar.gz
== 2024-10-30 19:32:46,779 build_log.py:267 INFO configuring...
== 2024-10-30 19:32:46,779 environment.py:93 INFO Environment variable PYTHONNOUSERSITE set to 1 (previous value: '1')
== 2024-10-30 19:32:46,780 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:46,780 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:46,856 pythonpackage.py:773 INFO Checking of $LDSHARED auto-enabled for sufficiently recent Python version 3.11.3
== 2024-10-30 19:32:46,856 pythonpackage.py:785 INFO Python's value for $LDSHARED ('gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g') uses current $CC value ('gcc'), not touching it
== 2024-10-30 19:32:46,857 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -V; /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print(sys.executable, sys.path)'
== 2024-10-30 19:32:46,857 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -V; /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print(sys.executable, sys.path)'
== 2024-10-30 19:32:46,941 build_log.py:267 INFO building...
== 2024-10-30 19:32:46,941 build_log.py:267 INFO testing...
== 2024-10-30 19:32:46,941 build_log.py:267 INFO installing...
== 2024-10-30 19:32:46,941 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:46,941 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:47,018 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:32:47,019 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:32:47,094 pythonpackage.py:283 INFO Active Python installation scheme: posix_prefix
== 2024-10-30 19:32:47,094 environment.py:93 INFO Environment variable PYTHONPATH set to /apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyCUDA/2024.1-gfbf-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyOpenGL/3.1.7-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/lxml/4.9.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/jedi/0.19.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch-bundle/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/grpcio/1.57.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/sympy/1.12-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/gmpy2/2.1.5-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/expecttest/0.1.5-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/protobuf-python/4.24.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/visdom/0.2.4-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/psycopg2/2.9.9-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/plotly.py/5.16.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/lib/python3.11/site-packages:/apps/Test/software/PyGObject/3.46.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyCairo/1.25.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/scikit-image/0.22.0-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/imageio/2.33.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/dask/2023.9.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/bokeh/3.2.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/tornado/6.3.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Pillow-SIMD/9.5.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyYAML/6.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/networkx/3.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/Pillow/10.0.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Tkinter/3.11.3-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cryptography/41.0.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cffi/1.15.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/easybuild/python (previous value: '/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyCUDA/2024.1-gfbf-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyOpenGL/3.1.7-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/lxml/4.9.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/jedi/0.19.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch-bundle/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/grpcio/1.57.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/sympy/1.12-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/gmpy2/2.1.5-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/expecttest/0.1.5-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/protobuf-python/4.24.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/visdom/0.2.4-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/psycopg2/2.9.9-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/plotly.py/5.16.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/lib/python3.11/site-packages:/apps/Test/software/PyGObject/3.46.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyCairo/1.25.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/scikit-image/0.22.0-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/imageio/2.33.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/dask/2023.9.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/bokeh/3.2.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/tornado/6.3.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Pillow-SIMD/9.5.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyYAML/6.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/networkx/3.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/Pillow/10.0.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Tkinter/3.11.3-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cryptography/41.0.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cffi/1.15.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/easybuild/python')
== 2024-10-30 19:32:47,094 environment.py:93 INFO Environment variable PATH set to /apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/bin:/apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/bin:/apps/Test/software/libxslt/1.1.38-GCCcore-12.3.0/bin:/apps/Test/software/ZeroMQ/4.3.4-GCCcore-12.3.0/bin:/apps/Test/software/SoX/14.4.2-GCCcore-12.3.0/bin:/apps/Test/software/FLAC/1.4.2-GCCcore-12.3.0/bin:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/bin:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/bin:/apps/Test/software/gperftools/2.12-GCCcore-12.3.0/bin:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/bin:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/bin:/apps/Test/software/sympy/1.12-gfbf-2023a/bin:/apps/Test/software/protobuf/24.0-GCCcore-12.3.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.3.0/bin:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/bin:/apps/Test/software/visdom/0.2.4-gfbf-2023a/bin:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/bin:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/bin:/apps/Test/software/PostgreSQL/16.1-GCCcore-12.3.0/bin:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/bin:/apps/Common/software/CUDA/12.1.1/nvvm/bin:/apps/Common/software/CUDA/12.1.1/bin:/apps/Test/software/HDF5/1.14.0-gompi-2023a/bin:/apps/Test/software/GTK4/4.13.1-GCC-12.3.0/bin:/apps/Test/software/GObject-Introspection/1.76.1-GCCcore-12.3.0/bin:/apps/Test/software/Wayland/1.22.0-GCCcore-12.3.0/bin:/apps/Test/software/GST-plugins-bad/1.22.5-GCC-12.3.0/bin:/apps/Test/software/GST-plugins-base/1.22.5-GCC-12.3.0/bin:/apps/Test/software/GStreamer/1.22.5-GCC-12.3.0/bin:/apps/Test/software/elfutils/0.189-GCCcore-12.3.0/bin:/apps/Test/software/libarchive/3.6.2-GCCcore-12.3.0/bin:/apps/Test/software/GSL/2.7-GCC-12.3.0/bin:/apps/Test/software/LLVM/16.0.6-GCCcore-12.3.0/bin:/apps/Test/software/Pango/1.50.14-GCCcore-12.3.0/bin:/apps/Test/software/Gdk-Pixbuf/2.42.10-GCCcore-12.3.0/bin:/apps/Test/software/DBus/1.15.4-GCCcore-12.3.0/bin:/apps/Test/software/ant/1.10.14-Java-11:/apps/Test/software/ant/1.10.14-Java-11/bin:/apps/Common/software/Java/11.0.20:/apps/Common/software/Java/11.0.20/bin:/apps/Test/software/JasPer/4.0.0-GCCcore-12.3.0/bin:/apps/Test/software/OpenEXR/3.1.7-GCCcore-12.3.0/bin:/apps/Test/software/HarfBuzz/5.3.1-GCCcore-12.3.0/bin:/apps/Test/software/cairo/1.17.8-GCCcore-12.3.0/bin:/apps/Test/software/ICU/73.2-GCCcore-12.3.0/sbin:/apps/Test/software/ICU/73.2-GCCcore-12.3.0/bin:/apps/Test/software/GLib/2.77.1-GCCcore-12.3.0/bin:/apps/Test/software/PCRE2/10.42-GCCcore-12.3.0/bin:/apps/Test/software/gettext/0.21.1-GCCcore-12.3.0/bin:/apps/Test/software/FFmpeg/6.0-GCCcore-12.3.0/bin:/apps/Test/software/SDL2/2.28.2-GCCcore-12.3.0/bin:/apps/Test/software/FriBidi/1.0.12-GCCcore-12.3.0/bin:/apps/Test/software/x265/3.5-GCCcore-12.3.0/bin:/apps/Test/software/LAME/3.100-GCCcore-12.3.0/bin:/apps/Test/software/x264/20230226-GCCcore-12.3.0/bin:/apps/Test/software/scikit-image/0.22.0-foss-2023a/bin:/apps/Test/software/imageio/2.33.1-gfbf-2023a/bin:/apps/Test/software/dask/2023.9.2-foss-2023a/bin:/apps/Test/software/bokeh/3.2.2-foss-2023a/bin:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/bin:/apps/Test/software/Qhull/2020.2-GCCcore-12.3.0/bin:/apps/Test/software/LittleCMS/2.15-GCCcore-12.3.0/bin:/apps/Test/software/OpenJPEG/2.5.0-GCCcore-12.3.0/bin:/apps/Test/software/libwebp/1.3.1-GCCcore-12.3.0/bin:/apps/Test/software/giflib/5.2.1-GCCcore-12.3.0/bin:/apps/Test/software/LibTIFF/4.5.0-GCCcore-12.3.0/bin:/apps/Test/software/libdeflate/1.18-GCCcore-12.3.0/bin:/apps/Test/software/zstd/1.5.5-GCCcore-12.3.0/bin:/apps/Test/software/lz4/1.9.4-GCCcore-12.3.0/bin:/apps/Test/software/gzip/1.12-GCCcore-12.3.0/bin:/apps/Test/software/jbigkit/2.1-GCCcore-12.3.0/bin:/apps/Test/software/libjpeg-turbo/2.1.5.1-GCCcore-12.3.0/bin:/apps/Test/software/NASM/2.16.01-GCCcore-12.3.0/bin:/apps/Test/software/Tk/8.6.13-GCCcore-12.3.0/bin:/apps/Test/software/X11/20230603-GCCcore-12.3.0/bin:/apps/Test/software/fontconfig/2.14.2-GCCcore-12.3.0/bin:/apps/Test/software/util-linux/2.39-GCCcore-12.3.0/sbin:/apps/Test/software/util-linux/2.39-GCCcore-12.3.0/bin:/apps/Test/software/expat/2.5.0-GCCcore-12.3.0/bin:/apps/Test/software/freetype/2.13.0-GCCcore-12.3.0/bin:/apps/Test/software/Brotli/1.0.9-GCCcore-12.3.0/bin:/apps/Test/software/libpng/1.6.39-GCCcore-12.3.0/bin:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/bin:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/bin:/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/bin:/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/bin:/apps/Test/software/UCC/1.2.0-GCCcore-12.3.0/bin:/apps/Test/software/PMIx/4.2.4-GCCcore-12.3.0/bin:/apps/Test/software/UCX/1.14.1-GCCcore-12.3.0/bin:/apps/Test/software/libevent/2.1.12-GCCcore-12.3.0/bin:/apps/Test/software/hwloc/2.9.1-GCCcore-12.3.0/sbin:/apps/Test/software/hwloc/2.9.1-GCCcore-12.3.0/bin:/apps/Test/software/libxml2/2.11.4-GCCcore-12.3.0/bin:/apps/Test/software/numactl/2.0.16-GCCcore-12.3.0/bin:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/bin:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/bin:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/bin:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.4.2-GCCcore-12.3.0/bin:/apps/Test/software/SQLite/3.42.0-GCCcore-12.3.0/bin:/apps/Test/software/Tcl/8.6.13-GCCcore-12.3.0/bin:/apps/Test/software/ncurses/6.4-GCCcore-12.3.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.3.0/bin:/apps/Test/software/binutils/2.40-GCCcore-12.3.0/bin:/apps/Test/software/GCCcore/12.3.0/bin:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/apps/Common/software/EasyBuild/4.9.4/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin (previous value: '/apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/bin:/apps/Test/software/libxslt/1.1.38-GCCcore-12.3.0/bin:/apps/Test/software/ZeroMQ/4.3.4-GCCcore-12.3.0/bin:/apps/Test/software/SoX/14.4.2-GCCcore-12.3.0/bin:/apps/Test/software/FLAC/1.4.2-GCCcore-12.3.0/bin:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/bin:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/bin:/apps/Test/software/gperftools/2.12-GCCcore-12.3.0/bin:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/bin:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/bin:/apps/Test/software/sympy/1.12-gfbf-2023a/bin:/apps/Test/software/protobuf/24.0-GCCcore-12.3.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.3.0/bin:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/bin:/apps/Test/software/visdom/0.2.4-gfbf-2023a/bin:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/bin:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/bin:/apps/Test/software/PostgreSQL/16.1-GCCcore-12.3.0/bin:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/bin:/apps/Common/software/CUDA/12.1.1/nvvm/bin:/apps/Common/software/CUDA/12.1.1/bin:/apps/Test/software/HDF5/1.14.0-gompi-2023a/bin:/apps/Test/software/GTK4/4.13.1-GCC-12.3.0/bin:/apps/Test/software/GObject-Introspection/1.76.1-GCCcore-12.3.0/bin:/apps/Test/software/Wayland/1.22.0-GCCcore-12.3.0/bin:/apps/Test/software/GST-plugins-bad/1.22.5-GCC-12.3.0/bin:/apps/Test/software/GST-plugins-base/1.22.5-GCC-12.3.0/bin:/apps/Test/software/GStreamer/1.22.5-GCC-12.3.0/bin:/apps/Test/software/elfutils/0.189-GCCcore-12.3.0/bin:/apps/Test/software/libarchive/3.6.2-GCCcore-12.3.0/bin:/apps/Test/software/GSL/2.7-GCC-12.3.0/bin:/apps/Test/software/LLVM/16.0.6-GCCcore-12.3.0/bin:/apps/Test/software/Pango/1.50.14-GCCcore-12.3.0/bin:/apps/Test/software/Gdk-Pixbuf/2.42.10-GCCcore-12.3.0/bin:/apps/Test/software/DBus/1.15.4-GCCcore-12.3.0/bin:/apps/Test/software/ant/1.10.14-Java-11:/apps/Test/software/ant/1.10.14-Java-11/bin:/apps/Common/software/Java/11.0.20:/apps/Common/software/Java/11.0.20/bin:/apps/Test/software/JasPer/4.0.0-GCCcore-12.3.0/bin:/apps/Test/software/OpenEXR/3.1.7-GCCcore-12.3.0/bin:/apps/Test/software/HarfBuzz/5.3.1-GCCcore-12.3.0/bin:/apps/Test/software/cairo/1.17.8-GCCcore-12.3.0/bin:/apps/Test/software/ICU/73.2-GCCcore-12.3.0/sbin:/apps/Test/software/ICU/73.2-GCCcore-12.3.0/bin:/apps/Test/software/GLib/2.77.1-GCCcore-12.3.0/bin:/apps/Test/software/PCRE2/10.42-GCCcore-12.3.0/bin:/apps/Test/software/gettext/0.21.1-GCCcore-12.3.0/bin:/apps/Test/software/FFmpeg/6.0-GCCcore-12.3.0/bin:/apps/Test/software/SDL2/2.28.2-GCCcore-12.3.0/bin:/apps/Test/software/FriBidi/1.0.12-GCCcore-12.3.0/bin:/apps/Test/software/x265/3.5-GCCcore-12.3.0/bin:/apps/Test/software/LAME/3.100-GCCcore-12.3.0/bin:/apps/Test/software/x264/20230226-GCCcore-12.3.0/bin:/apps/Test/software/scikit-image/0.22.0-foss-2023a/bin:/apps/Test/software/imageio/2.33.1-gfbf-2023a/bin:/apps/Test/software/dask/2023.9.2-foss-2023a/bin:/apps/Test/software/bokeh/3.2.2-foss-2023a/bin:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/bin:/apps/Test/software/Qhull/2020.2-GCCcore-12.3.0/bin:/apps/Test/software/LittleCMS/2.15-GCCcore-12.3.0/bin:/apps/Test/software/OpenJPEG/2.5.0-GCCcore-12.3.0/bin:/apps/Test/software/libwebp/1.3.1-GCCcore-12.3.0/bin:/apps/Test/software/giflib/5.2.1-GCCcore-12.3.0/bin:/apps/Test/software/LibTIFF/4.5.0-GCCcore-12.3.0/bin:/apps/Test/software/libdeflate/1.18-GCCcore-12.3.0/bin:/apps/Test/software/zstd/1.5.5-GCCcore-12.3.0/bin:/apps/Test/software/lz4/1.9.4-GCCcore-12.3.0/bin:/apps/Test/software/gzip/1.12-GCCcore-12.3.0/bin:/apps/Test/software/jbigkit/2.1-GCCcore-12.3.0/bin:/apps/Test/software/libjpeg-turbo/2.1.5.1-GCCcore-12.3.0/bin:/apps/Test/software/NASM/2.16.01-GCCcore-12.3.0/bin:/apps/Test/software/Tk/8.6.13-GCCcore-12.3.0/bin:/apps/Test/software/X11/20230603-GCCcore-12.3.0/bin:/apps/Test/software/fontconfig/2.14.2-GCCcore-12.3.0/bin:/apps/Test/software/util-linux/2.39-GCCcore-12.3.0/sbin:/apps/Test/software/util-linux/2.39-GCCcore-12.3.0/bin:/apps/Test/software/expat/2.5.0-GCCcore-12.3.0/bin:/apps/Test/software/freetype/2.13.0-GCCcore-12.3.0/bin:/apps/Test/software/Brotli/1.0.9-GCCcore-12.3.0/bin:/apps/Test/software/libpng/1.6.39-GCCcore-12.3.0/bin:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/bin:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/bin:/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/bin:/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/bin:/apps/Test/software/UCC/1.2.0-GCCcore-12.3.0/bin:/apps/Test/software/PMIx/4.2.4-GCCcore-12.3.0/bin:/apps/Test/software/UCX/1.14.1-GCCcore-12.3.0/bin:/apps/Test/software/libevent/2.1.12-GCCcore-12.3.0/bin:/apps/Test/software/hwloc/2.9.1-GCCcore-12.3.0/sbin:/apps/Test/software/hwloc/2.9.1-GCCcore-12.3.0/bin:/apps/Test/software/libxml2/2.11.4-GCCcore-12.3.0/bin:/apps/Test/software/numactl/2.0.16-GCCcore-12.3.0/bin:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/bin:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/bin:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/bin:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.4.2-GCCcore-12.3.0/bin:/apps/Test/software/SQLite/3.42.0-GCCcore-12.3.0/bin:/apps/Test/software/Tcl/8.6.13-GCCcore-12.3.0/bin:/apps/Test/software/ncurses/6.4-GCCcore-12.3.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.3.0/bin:/apps/Test/software/binutils/2.40-GCCcore-12.3.0/bin:/apps/Test/software/GCCcore/12.3.0/bin:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/apps/Common/software/EasyBuild/4.9.4/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin')
== 2024-10-30 19:32:47,094 pythonpackage.py:243 INFO Determining pip version...
== 2024-10-30 19:32:47,094 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip --version
== 2024-10-30 19:32:47,094 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip --version
== 2024-10-30 19:32:47,588 pythonpackage.py:251 INFO Found pip version: 23.1.2
== 2024-10-30 19:32:47,588 pythonpackage.py:643 INFO Found pip version 23.1.2, OK
== 2024-10-30 19:32:47,589 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1 --no-deps --ignore-installed --no-index --no-build-isolation .
== 2024-10-30 19:32:47,589 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1 --no-deps --ignore-installed --no-index --no-build-isolation .
== 2024-10-30 19:32:49,961 run.py:700 INFO cmd " /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1 --no-deps --ignore-installed --no-index --no-build-isolation ." exited with exit code 0 and output:
Processing /dev/shm/PyTorch3D/0.7.8/foss-2023a-CUDA-12.1.1/lpips/lpips-0.1.4
Preparing metadata (setup.py): started
Preparing metadata (setup.py): finished with status 'done'
Building wheels for collected packages: lpips
Building wheel for lpips (setup.py): started
Building wheel for lpips (setup.py): finished with status 'done'
Created wheel for lpips: filename=lpips-0.1.4-py3-none-any.whl size=14930 sha256=1f3f7503453a950f14e89e40abd15d30fe3b18b24b336eacdb32cbbe5f512691
Stored in directory: /cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/pip-ephem-wheel-cache-qpwa056e/wheels/db/9a/c2/b898bc6a9d080e3575e9098c53d75f7178d6eafab3a1d3e405
Successfully built lpips
Installing collected packages: lpips
Successfully installed lpips-0.1.4
== 2024-10-30 19:32:49,961 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:49,961 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:50,037 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:32:50,037 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:32:50,112 pythonpackage.py:283 INFO Active Python installation scheme: posix_prefix
== 2024-10-30 19:32:50,113 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:50,113 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:50,194 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:32:50,194 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:32:50,268 pythonpackage.py:283 INFO Active Python installation scheme: posix_prefix
== 2024-10-30 19:32:50,268 easyblock.py:2954 INFO Path to 'env' command to use in patched shebang lines: /usr/bin/env
== 2024-10-30 19:32:50,268 environment.py:93 INFO Environment variable PYTHONPATH set to /apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyCUDA/2024.1-gfbf-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyOpenGL/3.1.7-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/lxml/4.9.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/jedi/0.19.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch-bundle/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/grpcio/1.57.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/sympy/1.12-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/gmpy2/2.1.5-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/expecttest/0.1.5-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/protobuf-python/4.24.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/visdom/0.2.4-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/psycopg2/2.9.9-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/plotly.py/5.16.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/lib/python3.11/site-packages:/apps/Test/software/PyGObject/3.46.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyCairo/1.25.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/scikit-image/0.22.0-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/imageio/2.33.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/dask/2023.9.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/bokeh/3.2.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/tornado/6.3.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Pillow-SIMD/9.5.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyYAML/6.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/networkx/3.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/Pillow/10.0.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Tkinter/3.11.3-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cryptography/41.0.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cffi/1.15.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/easybuild/python (previous value: '/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyCUDA/2024.1-gfbf-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyOpenGL/3.1.7-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/lxml/4.9.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/jedi/0.19.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch-bundle/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/grpcio/1.57.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/sympy/1.12-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/gmpy2/2.1.5-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/expecttest/0.1.5-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/protobuf-python/4.24.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/visdom/0.2.4-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/psycopg2/2.9.9-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/plotly.py/5.16.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/lib/python3.11/site-packages:/apps/Test/software/PyGObject/3.46.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyCairo/1.25.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/scikit-image/0.22.0-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/imageio/2.33.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/dask/2023.9.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/bokeh/3.2.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/tornado/6.3.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Pillow-SIMD/9.5.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyYAML/6.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/networkx/3.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/Pillow/10.0.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Tkinter/3.11.3-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cryptography/41.0.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cffi/1.15.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/easybuild/python')
== 2024-10-30 19:32:50,268 environment.py:93 INFO Environment variable PATH set to /apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/bin:/apps/Test/software/libxslt/1.1.38-GCCcore-12.3.0/bin:/apps/Test/software/ZeroMQ/4.3.4-GCCcore-12.3.0/bin:/apps/Test/software/SoX/14.4.2-GCCcore-12.3.0/bin:/apps/Test/software/FLAC/1.4.2-GCCcore-12.3.0/bin:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/bin:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/bin:/apps/Test/software/gperftools/2.12-GCCcore-12.3.0/bin:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/bin:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/bin:/apps/Test/software/sympy/1.12-gfbf-2023a/bin:/apps/Test/software/protobuf/24.0-GCCcore-12.3.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.3.0/bin:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/bin:/apps/Test/software/visdom/0.2.4-gfbf-2023a/bin:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/bin:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/bin:/apps/Test/software/PostgreSQL/16.1-GCCcore-12.3.0/bin:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/bin:/apps/Common/software/CUDA/12.1.1/nvvm/bin:/apps/Common/software/CUDA/12.1.1/bin:/apps/Test/software/HDF5/1.14.0-gompi-2023a/bin:/apps/Test/software/GTK4/4.13.1-GCC-12.3.0/bin:/apps/Test/software/GObject-Introspection/1.76.1-GCCcore-12.3.0/bin:/apps/Test/software/Wayland/1.22.0-GCCcore-12.3.0/bin:/apps/Test/software/GST-plugins-bad/1.22.5-GCC-12.3.0/bin:/apps/Test/software/GST-plugins-base/1.22.5-GCC-12.3.0/bin:/apps/Test/software/GStreamer/1.22.5-GCC-12.3.0/bin:/apps/Test/software/elfutils/0.189-GCCcore-12.3.0/bin:/apps/Test/software/libarchive/3.6.2-GCCcore-12.3.0/bin:/apps/Test/software/GSL/2.7-GCC-12.3.0/bin:/apps/Test/software/LLVM/16.0.6-GCCcore-12.3.0/bin:/apps/Test/software/Pango/1.50.14-GCCcore-12.3.0/bin:/apps/Test/software/Gdk-Pixbuf/2.42.10-GCCcore-12.3.0/bin:/apps/Test/software/DBus/1.15.4-GCCcore-12.3.0/bin:/apps/Test/software/ant/1.10.14-Java-11:/apps/Test/software/ant/1.10.14-Java-11/bin:/apps/Common/software/Java/11.0.20:/apps/Common/software/Java/11.0.20/bin:/apps/Test/software/JasPer/4.0.0-GCCcore-12.3.0/bin:/apps/Test/software/OpenEXR/3.1.7-GCCcore-12.3.0/bin:/apps/Test/software/HarfBuzz/5.3.1-GCCcore-12.3.0/bin:/apps/Test/software/cairo/1.17.8-GCCcore-12.3.0/bin:/apps/Test/software/ICU/73.2-GCCcore-12.3.0/sbin:/apps/Test/software/ICU/73.2-GCCcore-12.3.0/bin:/apps/Test/software/GLib/2.77.1-GCCcore-12.3.0/bin:/apps/Test/software/PCRE2/10.42-GCCcore-12.3.0/bin:/apps/Test/software/gettext/0.21.1-GCCcore-12.3.0/bin:/apps/Test/software/FFmpeg/6.0-GCCcore-12.3.0/bin:/apps/Test/software/SDL2/2.28.2-GCCcore-12.3.0/bin:/apps/Test/software/FriBidi/1.0.12-GCCcore-12.3.0/bin:/apps/Test/software/x265/3.5-GCCcore-12.3.0/bin:/apps/Test/software/LAME/3.100-GCCcore-12.3.0/bin:/apps/Test/software/x264/20230226-GCCcore-12.3.0/bin:/apps/Test/software/scikit-image/0.22.0-foss-2023a/bin:/apps/Test/software/imageio/2.33.1-gfbf-2023a/bin:/apps/Test/software/dask/2023.9.2-foss-2023a/bin:/apps/Test/software/bokeh/3.2.2-foss-2023a/bin:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/bin:/apps/Test/software/Qhull/2020.2-GCCcore-12.3.0/bin:/apps/Test/software/LittleCMS/2.15-GCCcore-12.3.0/bin:/apps/Test/software/OpenJPEG/2.5.0-GCCcore-12.3.0/bin:/apps/Test/software/libwebp/1.3.1-GCCcore-12.3.0/bin:/apps/Test/software/giflib/5.2.1-GCCcore-12.3.0/bin:/apps/Test/software/LibTIFF/4.5.0-GCCcore-12.3.0/bin:/apps/Test/software/libdeflate/1.18-GCCcore-12.3.0/bin:/apps/Test/software/zstd/1.5.5-GCCcore-12.3.0/bin:/apps/Test/software/lz4/1.9.4-GCCcore-12.3.0/bin:/apps/Test/software/gzip/1.12-GCCcore-12.3.0/bin:/apps/Test/software/jbigkit/2.1-GCCcore-12.3.0/bin:/apps/Test/software/libjpeg-turbo/2.1.5.1-GCCcore-12.3.0/bin:/apps/Test/software/NASM/2.16.01-GCCcore-12.3.0/bin:/apps/Test/software/Tk/8.6.13-GCCcore-12.3.0/bin:/apps/Test/software/X11/20230603-GCCcore-12.3.0/bin:/apps/Test/software/fontconfig/2.14.2-GCCcore-12.3.0/bin:/apps/Test/software/util-linux/2.39-GCCcore-12.3.0/sbin:/apps/Test/software/util-linux/2.39-GCCcore-12.3.0/bin:/apps/Test/software/expat/2.5.0-GCCcore-12.3.0/bin:/apps/Test/software/freetype/2.13.0-GCCcore-12.3.0/bin:/apps/Test/software/Brotli/1.0.9-GCCcore-12.3.0/bin:/apps/Test/software/libpng/1.6.39-GCCcore-12.3.0/bin:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/bin:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/bin:/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/bin:/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/bin:/apps/Test/software/UCC/1.2.0-GCCcore-12.3.0/bin:/apps/Test/software/PMIx/4.2.4-GCCcore-12.3.0/bin:/apps/Test/software/UCX/1.14.1-GCCcore-12.3.0/bin:/apps/Test/software/libevent/2.1.12-GCCcore-12.3.0/bin:/apps/Test/software/hwloc/2.9.1-GCCcore-12.3.0/sbin:/apps/Test/software/hwloc/2.9.1-GCCcore-12.3.0/bin:/apps/Test/software/libxml2/2.11.4-GCCcore-12.3.0/bin:/apps/Test/software/numactl/2.0.16-GCCcore-12.3.0/bin:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/bin:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/bin:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/bin:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.4.2-GCCcore-12.3.0/bin:/apps/Test/software/SQLite/3.42.0-GCCcore-12.3.0/bin:/apps/Test/software/Tcl/8.6.13-GCCcore-12.3.0/bin:/apps/Test/software/ncurses/6.4-GCCcore-12.3.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.3.0/bin:/apps/Test/software/binutils/2.40-GCCcore-12.3.0/bin:/apps/Test/software/GCCcore/12.3.0/bin:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/apps/Common/software/EasyBuild/4.9.4/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin (previous value: '/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/bin:/apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/bin:/apps/Test/software/libxslt/1.1.38-GCCcore-12.3.0/bin:/apps/Test/software/ZeroMQ/4.3.4-GCCcore-12.3.0/bin:/apps/Test/software/SoX/14.4.2-GCCcore-12.3.0/bin:/apps/Test/software/FLAC/1.4.2-GCCcore-12.3.0/bin:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/bin:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/bin:/apps/Test/software/gperftools/2.12-GCCcore-12.3.0/bin:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/bin:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/bin:/apps/Test/software/sympy/1.12-gfbf-2023a/bin:/apps/Test/software/protobuf/24.0-GCCcore-12.3.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.3.0/bin:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/bin:/apps/Test/software/visdom/0.2.4-gfbf-2023a/bin:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/bin:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/bin:/apps/Test/software/PostgreSQL/16.1-GCCcore-12.3.0/bin:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/bin:/apps/Common/software/CUDA/12.1.1/nvvm/bin:/apps/Common/software/CUDA/12.1.1/bin:/apps/Test/software/HDF5/1.14.0-gompi-2023a/bin:/apps/Test/software/GTK4/4.13.1-GCC-12.3.0/bin:/apps/Test/software/GObject-Introspection/1.76.1-GCCcore-12.3.0/bin:/apps/Test/software/Wayland/1.22.0-GCCcore-12.3.0/bin:/apps/Test/software/GST-plugins-bad/1.22.5-GCC-12.3.0/bin:/apps/Test/software/GST-plugins-base/1.22.5-GCC-12.3.0/bin:/apps/Test/software/GStreamer/1.22.5-GCC-12.3.0/bin:/apps/Test/software/elfutils/0.189-GCCcore-12.3.0/bin:/apps/Test/software/libarchive/3.6.2-GCCcore-12.3.0/bin:/apps/Test/software/GSL/2.7-GCC-12.3.0/bin:/apps/Test/software/LLVM/16.0.6-GCCcore-12.3.0/bin:/apps/Test/software/Pango/1.50.14-GCCcore-12.3.0/bin:/apps/Test/software/Gdk-Pixbuf/2.42.10-GCCcore-12.3.0/bin:/apps/Test/software/DBus/1.15.4-GCCcore-12.3.0/bin:/apps/Test/software/ant/1.10.14-Java-11:/apps/Test/software/ant/1.10.14-Java-11/bin:/apps/Common/software/Java/11.0.20:/apps/Common/software/Java/11.0.20/bin:/apps/Test/software/JasPer/4.0.0-GCCcore-12.3.0/bin:/apps/Test/software/OpenEXR/3.1.7-GCCcore-12.3.0/bin:/apps/Test/software/HarfBuzz/5.3.1-GCCcore-12.3.0/bin:/apps/Test/software/cairo/1.17.8-GCCcore-12.3.0/bin:/apps/Test/software/ICU/73.2-GCCcore-12.3.0/sbin:/apps/Test/software/ICU/73.2-GCCcore-12.3.0/bin:/apps/Test/software/GLib/2.77.1-GCCcore-12.3.0/bin:/apps/Test/software/PCRE2/10.42-GCCcore-12.3.0/bin:/apps/Test/software/gettext/0.21.1-GCCcore-12.3.0/bin:/apps/Test/software/FFmpeg/6.0-GCCcore-12.3.0/bin:/apps/Test/software/SDL2/2.28.2-GCCcore-12.3.0/bin:/apps/Test/software/FriBidi/1.0.12-GCCcore-12.3.0/bin:/apps/Test/software/x265/3.5-GCCcore-12.3.0/bin:/apps/Test/software/LAME/3.100-GCCcore-12.3.0/bin:/apps/Test/software/x264/20230226-GCCcore-12.3.0/bin:/apps/Test/software/scikit-image/0.22.0-foss-2023a/bin:/apps/Test/software/imageio/2.33.1-gfbf-2023a/bin:/apps/Test/software/dask/2023.9.2-foss-2023a/bin:/apps/Test/software/bokeh/3.2.2-foss-2023a/bin:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/bin:/apps/Test/software/Qhull/2020.2-GCCcore-12.3.0/bin:/apps/Test/software/LittleCMS/2.15-GCCcore-12.3.0/bin:/apps/Test/software/OpenJPEG/2.5.0-GCCcore-12.3.0/bin:/apps/Test/software/libwebp/1.3.1-GCCcore-12.3.0/bin:/apps/Test/software/giflib/5.2.1-GCCcore-12.3.0/bin:/apps/Test/software/LibTIFF/4.5.0-GCCcore-12.3.0/bin:/apps/Test/software/libdeflate/1.18-GCCcore-12.3.0/bin:/apps/Test/software/zstd/1.5.5-GCCcore-12.3.0/bin:/apps/Test/software/lz4/1.9.4-GCCcore-12.3.0/bin:/apps/Test/software/gzip/1.12-GCCcore-12.3.0/bin:/apps/Test/software/jbigkit/2.1-GCCcore-12.3.0/bin:/apps/Test/software/libjpeg-turbo/2.1.5.1-GCCcore-12.3.0/bin:/apps/Test/software/NASM/2.16.01-GCCcore-12.3.0/bin:/apps/Test/software/Tk/8.6.13-GCCcore-12.3.0/bin:/apps/Test/software/X11/20230603-GCCcore-12.3.0/bin:/apps/Test/software/fontconfig/2.14.2-GCCcore-12.3.0/bin:/apps/Test/software/util-linux/2.39-GCCcore-12.3.0/sbin:/apps/Test/software/util-linux/2.39-GCCcore-12.3.0/bin:/apps/Test/software/expat/2.5.0-GCCcore-12.3.0/bin:/apps/Test/software/freetype/2.13.0-GCCcore-12.3.0/bin:/apps/Test/software/Brotli/1.0.9-GCCcore-12.3.0/bin:/apps/Test/software/libpng/1.6.39-GCCcore-12.3.0/bin:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/bin:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/bin:/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/bin:/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/bin:/apps/Test/software/UCC/1.2.0-GCCcore-12.3.0/bin:/apps/Test/software/PMIx/4.2.4-GCCcore-12.3.0/bin:/apps/Test/software/UCX/1.14.1-GCCcore-12.3.0/bin:/apps/Test/software/libevent/2.1.12-GCCcore-12.3.0/bin:/apps/Test/software/hwloc/2.9.1-GCCcore-12.3.0/sbin:/apps/Test/software/hwloc/2.9.1-GCCcore-12.3.0/bin:/apps/Test/software/libxml2/2.11.4-GCCcore-12.3.0/bin:/apps/Test/software/numactl/2.0.16-GCCcore-12.3.0/bin:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/bin:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/bin:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/bin:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.4.2-GCCcore-12.3.0/bin:/apps/Test/software/SQLite/3.42.0-GCCcore-12.3.0/bin:/apps/Test/software/Tcl/8.6.13-GCCcore-12.3.0/bin:/apps/Test/software/ncurses/6.4-GCCcore-12.3.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.3.0/bin:/apps/Test/software/binutils/2.40-GCCcore-12.3.0/bin:/apps/Test/software/GCCcore/12.3.0/bin:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/apps/Common/software/EasyBuild/4.9.4/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin')
== 2024-10-30 19:32:50,268 build_log.py:267 INFO ... (took 5 secs)
== 2024-10-30 19:32:50,268 easyblock.py:1914 INFO Starting extension PyTorch3D
== 2024-10-30 19:32:50,269 build_log.py:267 INFO installing extension PyTorch3D 0.7.8 (7/7)...
== 2024-10-30 19:32:51,104 modules.py:628 INFO Checking whether foss/2023a exists...
== 2024-10-30 19:32:51,104 modules.py:636 INFO Module foss/2023a not found in list of available modules, checking via 'module show'...
== 2024-10-30 19:32:51,104 modules.py:656 INFO Result for existence check of foss/2023a module: True
== 2024-10-30 19:32:51,105 toolchain.py:766 INFO List of toolchain dependency modules and toolchain definition match!
== 2024-10-30 19:32:51,106 compiler.py:363 INFO _set_optimal_architecture: using march=native as optarch for x86_64/Intel.
== 2024-10-30 19:32:51,114 variables.py:203 WARNING flags_for_subdirs: directory /apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/include was not found
== 2024-10-30 19:32:51,118 environment.py:93 INFO Environment variable BLAS_INC_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:51,118 environment.py:93 INFO Environment variable EBVARBLAS_INC_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:51,118 environment.py:93 INFO Environment variable BLAS_LAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:51,118 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:51,118 environment.py:93 INFO Environment variable BLAS_LAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,118 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable BLAS_LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable BLAS_LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable BLAS_LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable BLAS_LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable BLAS_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable EBVARBLAS_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable BLAS_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable EBVARBLAS_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable BLAS_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable EBVARBLAS_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:51,119 environment.py:93 INFO Environment variable BLAS_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable EBVARBLAS_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable BLAS_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable EBVARBLAS_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable CC set to gcc (previous value: 'gcc')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable EBVARCC set to gcc (previous value: 'gcc')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable CFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable EBVARCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable CPPFLAGS set to -I/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include -I/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include -I/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '-I/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include -I/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include -I/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable EBVARCPPFLAGS set to -I/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include -I/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include -I/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '-I/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include -I/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include -I/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable CXX set to g++ (previous value: 'g++')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable EBVARCXX set to g++ (previous value: 'g++')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable CXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable EBVARCXXFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,120 environment.py:93 INFO Environment variable F77 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable EBVARF77 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable F90 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable EBVARF90 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable F90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable EBVARF90FLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable FC set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable EBVARFC set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable FCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable EBVARFCFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable FFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable EBVARFFLAGS set to -O2 -ftree-vectorize -march=native -fno-math-errno (previous value: '-O2 -ftree-vectorize -march=native -fno-math-errno')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable FFTW_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable EBVARFFTW_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable FFTW_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,121 environment.py:93 INFO Environment variable EBVARFFTW_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable FFTW_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable EBVARFFTW_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable FFTW_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable EBVARFFTW_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable FFTW_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable EBVARFFTW_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable FFTW_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable EBVARFFTW_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable FFT_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable EBVARFFT_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/include')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable FFT_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable EBVARFFT_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable FFT_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable EBVARFFT_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so')
== 2024-10-30 19:32:51,122 environment.py:93 INFO Environment variable FFT_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable EBVARFFT_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable FFT_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable FFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable EBVARFFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable FLIBS set to -lgfortran (previous value: '-lgfortran')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable EBVARFLIBS set to -lgfortran (previous value: '-lgfortran')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable LAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable EBVARLAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/include/flexiblas')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable LAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable EBVARLAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable EBVARLAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:51,123 environment.py:93 INFO Environment variable LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable EBVARLAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable LDFLAGS set to -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64 -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64 -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib -L/apps/Test/software/GCCcore/12.3.0/lib64 -L/apps/Test/software/GCCcore/12.3.0/lib (previous value: '-L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64 -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64 -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib -L/apps/Test/software/GCCcore/12.3.0/lib64 -L/apps/Test/software/GCCcore/12.3.0/lib')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable EBVARLDFLAGS set to -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64 -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64 -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib -L/apps/Test/software/GCCcore/12.3.0/lib64 -L/apps/Test/software/GCCcore/12.3.0/lib (previous value: '-L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.3.0/lib -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64 -L/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64 -L/apps/Test/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib -L/apps/Test/software/GCCcore/12.3.0/lib64 -L/apps/Test/software/GCCcore/12.3.0/lib')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable LIBBLAS set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable EBVARLIBBLAS set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable LIBBLAS_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable EBVARLIBBLAS_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable LIBFFT set to -lfftw3 (previous value: '-lfftw3')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable EBVARLIBFFT set to -lfftw3 (previous value: '-lfftw3')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable LIBFFT_MT set to -lfftw3 -lpthread (previous value: '-lfftw3 -lpthread')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable EBVARLIBFFT_MT set to -lfftw3 -lpthread (previous value: '-lfftw3 -lpthread')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable LIBLAPACK set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:51,124 environment.py:93 INFO Environment variable EBVARLIBLAPACK set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable LIBLAPACK_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable EBVARLIBLAPACK_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable LIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable LIBLAPACK_ONLY set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable EBVARLIBLAPACK_ONLY set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable LIBS set to -lm -lpthread (previous value: '-lm -lpthread')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable EBVARLIBS set to -lm -lpthread (previous value: '-lm -lpthread')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable LIBSCALAPACK set to -lscalapack -lflexiblas -lgfortran (previous value: '-lscalapack -lflexiblas -lgfortran')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable EBVARLIBSCALAPACK set to -lscalapack -lflexiblas -lgfortran (previous value: '-lscalapack -lflexiblas -lgfortran')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable LIBSCALAPACK_MT set to -lscalapack -lflexiblas -lgfortran -lpthread (previous value: '-lscalapack -lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable EBVARLIBSCALAPACK_MT set to -lscalapack -lflexiblas -lgfortran -lpthread (previous value: '-lscalapack -lflexiblas -lgfortran -lpthread')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable LIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran (previous value: '-lscalapack -lgfortran')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable EBVARLIBSCALAPACK_MT_ONLY set to -lscalapack -lgfortran (previous value: '-lscalapack -lgfortran')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable LIBSCALAPACK_ONLY set to -lscalapack -lgfortran (previous value: '-lscalapack -lgfortran')
== 2024-10-30 19:32:51,125 environment.py:93 INFO Environment variable EBVARLIBSCALAPACK_ONLY set to -lscalapack -lgfortran (previous value: '-lscalapack -lgfortran')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable MPICC set to mpicc (previous value: 'mpicc')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable EBVARMPICC set to mpicc (previous value: 'mpicc')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable MPICXX set to mpicxx (previous value: 'mpicxx')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable EBVARMPICXX set to mpicxx (previous value: 'mpicxx')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable MPIF77 set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable EBVARMPIF77 set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable MPIF90 set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable EBVARMPIF90 set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable MPIFC set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable EBVARMPIFC set to mpifort (previous value: 'mpifort')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable MPI_INC_DIR set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/include (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/include')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable EBVARMPI_INC_DIR set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/include (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/include')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable MPI_LIB_DIR set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64 (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable EBVARMPI_LIB_DIR set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64 (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable MPI_LIB_SHARED set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so')
== 2024-10-30 19:32:51,126 environment.py:93 INFO Environment variable EBVARMPI_LIB_SHARED set to /apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so (previous value: '/apps/Test/software/OpenMPI/4.1.5-GCC-12.3.0/lib64/libmpi.so')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable MPI_LIB_STATIC set to (previous value: '')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable EBVARMPI_LIB_STATIC set to (previous value: '')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable OMPI_CC set to gcc (previous value: 'gcc')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable EBVAROMPI_CC set to gcc (previous value: 'gcc')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable OMPI_CXX set to g++ (previous value: 'g++')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable EBVAROMPI_CXX set to g++ (previous value: 'g++')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable OMPI_F77 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable EBVAROMPI_F77 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable OMPI_F90 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable EBVAROMPI_F90 set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable OMPI_FC set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable EBVAROMPI_FC set to gfortran (previous value: 'gfortran')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable OPTFLAGS set to -O2 -ftree-vectorize -march=native (previous value: '-O2 -ftree-vectorize -march=native')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable EBVAROPTFLAGS set to -O2 -ftree-vectorize -march=native (previous value: '-O2 -ftree-vectorize -march=native')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable PRECFLAGS set to -fno-math-errno (previous value: '-fno-math-errno')
== 2024-10-30 19:32:51,127 environment.py:93 INFO Environment variable EBVARPRECFLAGS set to -fno-math-errno (previous value: '-fno-math-errno')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable SCALAPACK_INC_DIR set to (previous value: '')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable EBVARSCALAPACK_INC_DIR set to (previous value: '')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable SCALAPACK_LIB_DIR set to /apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib (previous value: '/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable EBVARSCALAPACK_LIB_DIR set to /apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib (previous value: '/apps/Test/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable SCALAPACK_MT_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable EBVARSCALAPACK_MT_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libscalapack.so,libflexiblas.so,libgfortran.so,libpthread.so')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable SCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable EBVARSCALAPACK_MT_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libscalapack.a,libflexiblas.a,libgfortran.a,libpthread.a')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable SCALAPACK_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so (previous value: 'libscalapack.so,libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable EBVARSCALAPACK_SHARED_LIBS set to libscalapack.so,libflexiblas.so,libgfortran.so (previous value: 'libscalapack.so,libflexiblas.so,libgfortran.so')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable SCALAPACK_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a (previous value: 'libscalapack.a,libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:51,128 environment.py:93 INFO Environment variable EBVARSCALAPACK_STATIC_LIBS set to libscalapack.a,libflexiblas.a,libgfortran.a (previous value: 'libscalapack.a,libflexiblas.a,libgfortran.a')
== 2024-10-30 19:32:51,129 filetools.py:528 INFO Command python found at /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python
== 2024-10-30 19:32:51,129 pythonpackage.py:553 INFO Python command being used: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python
== 2024-10-30 19:32:51,129 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:51,129 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:51,213 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'
== 2024-10-30 19:32:51,213 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'
== 2024-10-30 19:32:51,467 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:51,468 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:51,553 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'
== 2024-10-30 19:32:51,553 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'
== 2024-10-30 19:32:51,793 filetools.py:1924 INFO Creating directory /dev/shm/PyTorch3D/0.7.8/foss-2023a-CUDA-12.1.1/PyTorch3D (parents: True, set_gid: False, sticky: False)
== 2024-10-30 19:32:51,793 run.py:251 INFO Using /bin/bash as shell for running cmd: tar xzf /apps/sources/p/PyTorch3D/extensions/V0.7.8.tar.gz
== 2024-10-30 19:32:51,793 run.py:260 INFO running cmd: tar xzf /apps/sources/p/PyTorch3D/extensions/V0.7.8.tar.gz
== 2024-10-30 19:32:52,195 build_log.py:267 INFO configuring...
== 2024-10-30 19:32:52,196 environment.py:93 INFO Environment variable PYTHONNOUSERSITE set to 1 (previous value: '1')
== 2024-10-30 19:32:52,196 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:52,196 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:52,278 pythonpackage.py:773 INFO Checking of $LDSHARED auto-enabled for sufficiently recent Python version 3.11.3
== 2024-10-30 19:32:52,278 pythonpackage.py:785 INFO Python's value for $LDSHARED ('gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g') uses current $CC value ('gcc'), not touching it
== 2024-10-30 19:32:52,278 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -V; /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print(sys.executable, sys.path)'
== 2024-10-30 19:32:52,278 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -V; /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print(sys.executable, sys.path)'
== 2024-10-30 19:32:52,368 build_log.py:267 INFO building...
== 2024-10-30 19:32:52,368 build_log.py:267 INFO testing...
== 2024-10-30 19:32:52,369 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:52,369 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:32:52,446 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:32:52,446 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:32:52,524 pythonpackage.py:283 INFO Active Python installation scheme: posix_prefix
== 2024-10-30 19:32:52,525 filetools.py:1924 INFO Creating directory /cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq/lib/python3.11/site-packages (parents: True, set_gid: False, sticky: False)
== 2024-10-30 19:32:52,525 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print(sys.path)'
== 2024-10-30 19:32:52,525 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print(sys.path)'
== 2024-10-30 19:32:52,599 pythonpackage.py:243 INFO Determining pip version...
== 2024-10-30 19:32:52,599 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip --version
== 2024-10-30 19:32:52,599 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip --version
== 2024-10-30 19:32:53,013 pythonpackage.py:251 INFO Found pip version: 23.1.2
== 2024-10-30 19:32:53,013 pythonpackage.py:643 INFO Found pip version 23.1.2, OK
== 2024-10-30 19:32:53,013 run.py:251 INFO Using /bin/bash as shell for running cmd: export PYTHONPATH=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq/lib/python3.11/site-packages:$PYTHONPATH && /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq --no-deps --ignore-installed --no-index --no-build-isolation .
== 2024-10-30 19:32:53,013 run.py:260 INFO running cmd: export PYTHONPATH=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq/lib/python3.11/site-packages:$PYTHONPATH && /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq --no-deps --ignore-installed --no-index --no-build-isolation .
== 2024-10-30 19:35:17,639 run.py:700 INFO cmd "export PYTHONPATH=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq/lib/python3.11/site-packages:$PYTHONPATH && /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq --no-deps --ignore-installed --no-index --no-build-isolation ." exited with exit code 0 and output:
Processing /dev/shm/PyTorch3D/0.7.8/foss-2023a-CUDA-12.1.1/PyTorch3D/pytorch3d-0.7.8
Preparing metadata (setup.py): started
Preparing metadata (setup.py): finished with status 'done'
Building wheels for collected packages: pytorch3d
Building wheel for pytorch3d (setup.py): started
Building wheel for pytorch3d (setup.py): still running...
Building wheel for pytorch3d (setup.py): still running...
Building wheel for pytorch3d (setup.py): finished with status 'done'
Created wheel for pytorch3d: filename=pytorch3d-0.7.8-cp311-cp311-linux_x86_64.whl size=55974696 sha256=4f431388da26d8090ed4726596c120d1a14a5a0db9dd7e9f4a9605b0eec7622b
Stored in directory: /cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/pip-ephem-wheel-cache-doafs8oq/wheels/ae/c7/54/3f097db0a26a1aa07323210818f3958f32e55a26aade64de95
Successfully built pytorch3d
Installing collected packages: pytorch3d
Successfully installed pytorch3d-0.7.8
== 2024-10-30 19:35:17,640 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:35:17,640 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:35:17,739 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:35:17,739 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:35:17,815 pythonpackage.py:283 INFO Active Python installation scheme: posix_prefix
== 2024-10-30 19:35:17,815 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:35:17,815 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-30 19:35:17,890 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:35:17,890 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-30 19:35:17,968 pythonpackage.py:283 INFO Active Python installation scheme: posix_prefix
== 2024-10-30 19:35:17,968 run.py:251 INFO Using /bin/bash as shell for running cmd: export PYTHONPATH=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq/lib/python3.11/site-packages:$PYTHONPATH && mv pytorch3d pytorch3d.src && pytest tests -k "not ( (test_rasterize_rectangle_images.py and test_render_cow_opengl) or (test_rasterizer.py and test_compare_rasterizers) or (test_meshes.py and test_clone) or (test_render_multigpu.py and test_mesh_renderer_opengl_to) or (test_io_off.py and (test_bad or test_load_lumpy)) or (test_knn.py and test_knn_vs_python_square_cuda) or (test_opengl_utils.py and test_no_egl_error) or (test_points_alignment.py and test_heterogeneous_inputs) or (tests/implicitron/test_config.py and test_simpleclass_member) or (tests/implicitron/test_data_cow.py and test_simple) or (tests/implicitron/test_extending_orm_types.py and test_extending_frame_data) or (tests/pulsar/test_forward.py and TestForward))" && mv pytorch3d.src pytorch3d
== 2024-10-30 19:35:17,969 run.py:260 INFO running cmd: export PYTHONPATH=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq/lib/python3.11/site-packages:$PYTHONPATH && mv pytorch3d pytorch3d.src && pytest tests -k "not ( (test_rasterize_rectangle_images.py and test_render_cow_opengl) or (test_rasterizer.py and test_compare_rasterizers) or (test_meshes.py and test_clone) or (test_render_multigpu.py and test_mesh_renderer_opengl_to) or (test_io_off.py and (test_bad or test_load_lumpy)) or (test_knn.py and test_knn_vs_python_square_cuda) or (test_opengl_utils.py and test_no_egl_error) or (test_points_alignment.py and test_heterogeneous_inputs) or (tests/implicitron/test_config.py and test_simpleclass_member) or (tests/implicitron/test_data_cow.py and test_simple) or (tests/implicitron/test_extending_orm_types.py and test_extending_frame_data) or (tests/pulsar/test_forward.py and TestForward))" && mv pytorch3d.src pytorch3d
== 2024-10-31 10:36:00,054 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:126 in __init__): cmd "export PYTHONPATH=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq/lib/python3.11/site-packages:$PYTHONPATH && mv pytorch3d pytorch3d.src && pytest tests -k "not ( (test_rasterize_rectangle_images.py and test_render_cow_opengl) or (test_rasterizer.py and test_compare_rasterizers) or (test_meshes.py and test_clone) or (test_render_multigpu.py and test_mesh_renderer_opengl_to) or (test_io_off.py and (test_bad or test_load_lumpy)) or (test_knn.py and test_knn_vs_python_square_cuda) or (test_opengl_utils.py and test_no_egl_error) or (test_points_alignment.py and test_heterogeneous_inputs) or (tests/implicitron/test_config.py and test_simpleclass_member) or (tests/implicitron/test_data_cow.py and test_simple) or (tests/implicitron/test_extending_orm_types.py and test_extending_frame_data) or (tests/pulsar/test_forward.py and TestForward))" && mv pytorch3d.src pytorch3d " exited with exit code 131 and output:
======================================================================================= test session starts =======================================================================================
platform linux -- Python 3.11.3, pytest-7.4.0, pluggy-1.2.0
rootdir: /dev/shm/PyTorch3D/0.7.8/foss-2023a-CUDA-12.1.1/PyTorch3D/pytorch3d-0.7.8
plugins: mock-3.11.1, xdist-3.3.1
collected 961 items / 9 deselected / 952 selected
tests/test_acos_linear_extrapolation.py .. [ 0%]
tests/test_ball_query.py ..... [ 0%]
tests/test_blending.py ..... [ 1%]
tests/test_build.py ..... [ 1%]
tests/test_camera_conversions.py ... [ 2%]
tests/test_camera_pixels.py .... [ 2%]
tests/test_camera_utils.py .... [ 2%]
tests/test_cameras.py ................................................................. [ 9%]
tests/test_cameras_alignment.py . [ 9%]
tests/test_chamfer.py .................. [ 11%]
tests/test_checkerboard.py . [ 11%]
tests/test_common_linear_with_repeat.py . [ 11%]
tests/test_common_testing.py . [ 12%]
tests/test_common_workaround.py ... [ 12%]
tests/test_compositing.py .... [ 12%]
tests/test_cubify.py .... [ 13%]
tests/test_face_areas_normals.py .... [ 13%]
tests/test_graph_conv.py ........ [ 14%]
tests/test_harmonic_embedding.py ..... [ 15%]
tests/test_interpolate_face_attributes.py ...... [ 15%]
tests/test_io_gltf.py s...... [ 16%]
tests/test_io_obj.py .................................. [ 19%]
tests/test_io_off.py ... [ 20%]
tests/test_io_ply.py ..................... [ 22%]
tests/test_iou_box3d.py ...... [ 23%]
tests/test_knn.py ...... [ 23%]
tests/test_laplacian_matrices.py ... [ 24%]
tests/test_lighting.py ................... [ 26%]
tests/test_marching_cubes.py ......................... [ 28%]
tests/test_materials.py ....... [ 29%]
tests/test_mesh_edge_loss.py .. [ 29%]
tests/test_mesh_filtering.py . [ 29%]
tests/test_mesh_laplacian_smoothing.py ... [ 30%]
tests/test_mesh_normal_consistency.py ... [ 30%]
tests/test_mesh_rendering_utils.py . [ 30%]
tests/test_meshes.py ........................ [ 32%]
tests/test_opengl_utils.py FF..........FF.. [ 34%]
tests/test_ops_utils.py .. [ 34%]
tests/test_packed_to_padded.py .................... [ 36%]
tests/test_perspective_n_points.py .. [ 37%]
tests/test_point_mesh_distance.py ......... [ 38%]
tests/test_pointclouds.py .......................FF. [ 40%]
tests/test_points_alignment.py ... [ 41%]
tests/test_points_normals.py . [ 41%]
tests/test_points_to_volumes.py ................... [ 43%]
tests/test_r2n2.py sssssss [ 44%]
tests/test_rasterize_meshes.py ................. [ 45%]
tests/test_rasterize_points.py ................. [ 47%]
tests/test_rasterize_rectangle_images.py ........ [ 48%]
tests/test_rasterizer.py ../bin/bash: line 1: 296247 Quit (core dumped) pytest tests -k "not ( (test_rasterize_rectangle_images.py and test_render_cow_opengl) or (test_rasterizer.py and test_compare_rasterizers) or (test_meshes.py and test_clone) or (test_render_multigpu.py and test_mesh_renderer_opengl_to) or (test_io_off.py and (test_bad or test_load_lumpy)) or (test_knn.py and test_knn_vs_python_square_cuda) or (test_opengl_utils.py and test_no_egl_error) or (test_points_alignment.py and test_heterogeneous_inputs) or (tests/implicitron/test_config.py and test_simpleclass_member) or (tests/implicitron/test_data_cow.py and test_simple) or (tests/implicitron/test_extending_orm_types.py and test_extending_frame_data) or (tests/pulsar/test_forward.py and TestForward))"
(at easybuild/tools/run.py:695 in parse_cmd_output)
== 2024-10-31 10:36:00,316 build_log.py:369 WARNING Test failure ignored: 'cmd "export PYTHONPATH=/cephyr/NOBACKUP/priv/c3-staff/eb-tmp/eb-giftprjf/tmptvvycloq/lib/python3.11/site-packages:$PYTHONPATH && mv pytorch3d pytorch3d.src && pytest tests -k "not ( (test_rasterize_rectangle_images.py and test_render_cow_opengl) or (test_rasterizer.py and test_compare_rasterizers) or (test_meshes.py and test_clone) or (test_render_multigpu.py and test_mesh_renderer_opengl_to) or (test_io_off.py and (test_bad or test_load_lumpy)) or (test_knn.py and test_knn_vs_python_square_cuda) or (test_opengl_utils.py and test_no_egl_error) or (test_points_alignment.py and test_heterogeneous_inputs) or (tests/implicitron/test_config.py and test_simpleclass_member) or (tests/implicitron/test_data_cow.py and test_simple) or (tests/implicitron/test_extending_orm_types.py and test_extending_frame_data) or (tests/pulsar/test_forward.py and TestForward))" && mv pytorch3d.src pytorch3d " exited with exit code 131 and output:\n======================================================================================= test session starts =======================================================================================\nplatform linux -- Python 3.11.3, pytest-7.4.0, pluggy-1.2.0\nrootdir: /dev/shm/PyTorch3D/0.7.8/foss-2023a-CUDA-12.1.1/PyTorch3D/pytorch3d-0.7.8\nplugins: mock-3.11.1, xdist-3.3.1\ncollected 961 items / 9 deselected / 952 selected\n\ntests/test_acos_linear_extrapolation.py .. [ 0%]\ntests/test_ball_query.py ..... [ 0%]\ntests/test_blending.py ..... [ 1%]\ntests/test_build.py ..... [ 1%]\ntests/test_camera_conversions.py ... [ 2%]\ntests/test_camera_pixels.py .... [ 2%]\ntests/test_camera_utils.py .... [ 2%]\ntests/test_cameras.py ................................................................. [ 9%]\ntests/test_cameras_alignment.py . [ 9%]\ntests/test_chamfer.py .................. [ 11%]\ntests/test_checkerboard.py . [ 11%]\ntests/test_common_linear_with_repeat.py . [ 11%]\ntests/test_common_testing.py . [ 12%]\ntests/test_common_workaround.py ... [ 12%]\ntests/test_compositing.py .... [ 12%]\ntests/test_cubify.py .... [ 13%]\ntests/test_face_areas_normals.py .... [ 13%]\ntests/test_graph_conv.py ........ [ 14%]\ntests/test_harmonic_embedding.py ..... [ 15%]\ntests/test_interpolate_face_attributes.py ...... [ 15%]\ntests/test_io_gltf.py s...... [ 16%]\ntests/test_io_obj.py .................................. [ 19%]\ntests/test_io_off.py ... [ 20%]\ntests/test_io_ply.py ..................... [ 22%]\ntests/test_iou_box3d.py ...... [ 23%]\ntests/test_knn.py ...... [ 23%]\ntests/test_laplacian_matrices.py ... [ 24%]\ntests/test_lighting.py ................... [ 26%]\ntests/test_marching_cubes.py ......................... [ 28%]\ntests/test_materials.py ....... [ 29%]\ntests/test_mesh_edge_loss.py .. [ 29%]\ntests/test_mesh_filtering.py . [ 29%]\ntests/test_mesh_laplacian_smoothing.py ... [ 30%]\ntests/test_mesh_normal_consistency.py ... [ 30%]\ntests/test_mesh_rendering_utils.py . [ 30%]\ntests/test_meshes.py ........................ [ 32%]\ntests/test_opengl_utils.py FF..........FF.. [ 34%]\ntests/test_ops_utils.py .. [ 34%]\ntests/test_packed_to_padded.py .................... [ 36%]\ntests/test_perspective_n_points.py .. [ 37%]\ntests/test_point_mesh_distance.py ......... [ 38%]\ntests/test_pointclouds.py .......................FF. [ 40%]\ntests/test_points_alignment.py ... [ 41%]\ntests/test_points_normals.py . [ 41%]\ntests/test_points_to_volumes.py ................... [ 43%]\ntests/test_r2n2.py sssssss [ 44%]\ntests/test_rasterize_meshes.py ................. [ 45%]\ntests/test_rasterize_points.py ................. [ 47%]\ntests/test_rasterize_rectangle_images.py ........ [ 48%]\ntests/test_rasterizer.py ../bin/bash: line 1: 296247 Quit (core dumped) pytest tests -k "not ( (test_rasterize_rectangle_images.py and test_render_cow_opengl) or (test_rasterizer.py and test_compare_rasterizers) or (test_meshes.py and test_clone) or (test_render_multigpu.py and test_mesh_renderer_opengl_to) or (test_io_off.py and (test_bad or test_load_lumpy)) or (test_knn.py and test_knn_vs_python_square_cuda) or (test_opengl_utils.py and test_no_egl_error) or (test_points_alignment.py and test_heterogeneous_inputs) or (tests/implicitron/test_config.py and test_simpleclass_member) or (tests/implicitron/test_data_cow.py and test_simple) or (tests/implicitron/test_extending_orm_types.py and test_extending_frame_data) or (tests/pulsar/test_forward.py and TestForward))"\n'
== 2024-10-31 10:36:00,316 build_log.py:267 INFO installing...
== 2024-10-31 10:36:00,316 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-31 10:36:00,316 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'
== 2024-10-31 10:36:00,496 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-31 10:36:00,496 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'
== 2024-10-31 10:36:00,570 pythonpackage.py:283 INFO Active Python installation scheme: posix_prefix
== 2024-10-31 10:36:00,570 environment.py:93 INFO Environment variable PYTHONPATH set to /apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyCUDA/2024.1-gfbf-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyOpenGL/3.1.7-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/lxml/4.9.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/jedi/0.19.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch-bundle/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/grpcio/1.57.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/sympy/1.12-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/gmpy2/2.1.5-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/expecttest/0.1.5-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/protobuf-python/4.24.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/visdom/0.2.4-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/psycopg2/2.9.9-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/plotly.py/5.16.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/lib/python3.11/site-packages:/apps/Test/software/PyGObject/3.46.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyCairo/1.25.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/scikit-image/0.22.0-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/imageio/2.33.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/dask/2023.9.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/bokeh/3.2.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/tornado/6.3.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Pillow-SIMD/9.5.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyYAML/6.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/networkx/3.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/Pillow/10.0.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Tkinter/3.11.3-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cryptography/41.0.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cffi/1.15.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/easybuild/python (previous value: '/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyCUDA/2024.1-gfbf-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/PyOpenGL/3.1.7-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/IPython/8.14.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/lxml/4.9.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/jedi/0.19.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch-bundle/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/tensorboard/2.15.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/grpcio/1.57.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SentencePiece/0.2.0-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyTorch/2.1.2-foss-2023a-CUDA-12.1.1/lib/python3.11/site-packages:/apps/Test/software/Z3/4.12.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/sympy/1.12-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/gmpy2/2.1.5-GCC-12.3.0/lib/python3.11/site-packages:/apps/Test/software/expecttest/0.1.5-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/protobuf-python/4.24.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/tqdm/4.66.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/visdom/0.2.4-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/SQLAlchemy/2.0.25-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Mako/1.2.4-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/psycopg2/2.9.9-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/plotly.py/5.16.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/OpenCV/4.8.1-foss-2023a-CUDA-12.1.1-contrib/lib/python3.11/site-packages:/apps/Test/software/PyGObject/3.46.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyCairo/1.25.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/scikit-image/0.22.0-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/imageio/2.33.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/dask/2023.9.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/bokeh/3.2.2-foss-2023a/lib/python3.11/site-packages:/apps/Test/software/tornado/6.3.2-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Pillow-SIMD/9.5.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/PyYAML/6.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/networkx/3.1-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/matplotlib/3.7.2-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/Pillow/10.0.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Tkinter/3.11.3-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/SciPy-bundle/2023.07-gfbf-2023a/lib/python3.11/site-packages:/apps/Test/software/pybind11/2.11.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python-bundle-PyPI/2023.06-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/virtualenv/20.23.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cryptography/41.0.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/cffi/1.15.1-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/hatchling/1.18.0-GCCcore-12.3.0/lib/python3.11/site-packages:/apps/Test/software/Python/3.11.3-GCCcore-12.3.0/easybuild/python')
== 2024-10-31 10:36:00,570 environment.py:93 INFO Environment variable PATH set to 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== 2024-10-31 10:36:00,570 pythonpackage.py:243 INFO Determining pip version...
== 2024-10-31 10:36:00,570 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip --version
== 2024-10-31 10:36:00,571 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip --version
== 2024-10-31 10:36:01,250 pythonpackage.py:251 INFO Found pip version: 23.1.2
== 2024-10-31 10:36:01,251 pythonpackage.py:643 INFO Found pip version 23.1.2, OK
== 2024-10-31 10:36:01,251 run.py:251 INFO Using /bin/bash as shell for running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1 --no-deps --ignore-installed --no-index --no-build-isolation .
== 2024-10-31 10:36:01,251 run.py:260 INFO running cmd: /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1 --no-deps --ignore-installed --no-index --no-build-isolation .
== 2024-10-31 10:36:04,992 build_log.py:171 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:126 in __init__): cmd " /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1 --no-deps --ignore-installed --no-index --no-build-isolation ." exited with exit code 1 and output:
Processing /dev/shm/PyTorch3D/0.7.8/foss-2023a-CUDA-12.1.1/PyTorch3D/pytorch3d-0.7.8
Preparing metadata (setup.py): started
Preparing metadata (setup.py): finished with status 'error'
error: subprocess-exited-with-error
python setup.py egg_info did not run successfully.
exit code: 1
> [9 lines of output]
Traceback (most recent call last):
File "<string>", line 2, in <module>
File "<pip-setuptools-caller>", line 34, in <module>
File "/dev/shm/PyTorch3D/0.7.8/foss-2023a-CUDA-12.1.1/PyTorch3D/pytorch3d-0.7.8/setup.py", line 130, in <module>
__version__ = runpy.run_path("pytorch3d/__init__.py")["__version__"]
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "<frozen runpy>", line 290, in run_path
File "<frozen runpy>", line 254, in _get_code_from_file
FileNotFoundError: [Errno 2] No such file or directory: '/dev/shm/PyTorch3D/0.7.8/foss-2023a-CUDA-12.1.1/PyTorch3D/pytorch3d-0.7.8/pytorch3d/__init__.py'
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed
Encountered error while generating package metadata.
> See above for output.
note: This is an issue with the package mentioned above, not pip.
hint: See above for details.
(at easybuild/tools/run.py:695 in parse_cmd_output)
== 2024-10-31 10:36:04,993 build_log.py:267 INFO ... (took 15 hours 3 mins 14 secs)
== 2024-10-31 10:36:04,993 build_log.py:267 INFO ... (took 15 hours 4 mins 2 secs)
== 2024-10-31 10:36:04,993 filetools.py:2025 INFO Removing lock /apps/Test/software/.locks/_apps_Test_software_PyTorch3D_0.7.8-foss-2023a-CUDA-12.1.1.lock...
== 2024-10-31 10:36:04,999 filetools.py:385 INFO Path /apps/Test/software/.locks/_apps_Test_software_PyTorch3D_0.7.8-foss-2023a-CUDA-12.1.1.lock successfully removed.
== 2024-10-31 10:36:04,999 filetools.py:2029 INFO Lock removed: /apps/Test/software/.locks/_apps_Test_software_PyTorch3D_0.7.8-foss-2023a-CUDA-12.1.1.lock
== 2024-10-31 10:36:04,999 easyblock.py:4297 WARNING build failed (first 300 chars): cmd " /apps/Test/software/Python/3.11.3-GCCcore-12.3.0/bin/python -m pip install --prefix=/apps/Test/software/PyTorch3D/0.7.8-foss-2023a-CUDA-12.1.1 --no-deps --ignore-installed --no-index --no-build-isolation ." exited with exit code 1 and output:
Processing /dev/shm/PyTorch3D/0.7.8/foss-2023a
== 2024-10-31 10:36:04,999 easyblock.py:326 INFO Closing log for application name PyTorch3D version 0.7.8
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