Created
November 28, 2024 12:15
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(partial) EasyBuild log for failed build of /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/SciPy-bundle-2023.02-gfbf-2022b.eb (easyblock PR(s) #3499)
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| == 2024-11-28 13:14:58,622 environment.py:93 INFO Environment variable EBVARFFTW_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable FFTW_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable EBVARFFTW_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable FFTW_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable EBVARFFTW_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable FFTW_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable EBVARFFTW_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable FFTW_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable EBVARFFTW_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable FFTW_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable EBVARFFTW_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable FFT_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable EBVARFFT_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable FFT_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable EBVARFFT_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable FFT_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable EBVARFFT_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable FFT_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so') | |
| == 2024-11-28 13:14:58,623 environment.py:93 INFO Environment variable EBVARFFT_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable FFT_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable FFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable EBVARFFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable FLIBS set to -lgfortran (previous value: '-lgfortran') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable EBVARFLIBS set to -lgfortran (previous value: '-lgfortran') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable LAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable EBVARLAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable LAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable EBVARLAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable EBVARLAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable EBVARLAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a') | |
| == 2024-11-28 13:14:58,624 environment.py:93 INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable LDFLAGS set to -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib64 -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib -L/apps/Test/software/GCCcore/12.2.0/lib64 -L/apps/Test/software/GCCcore/12.2.0/lib (previous value: '-L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib64 -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib -L/apps/Test/software/GCCcore/12.2.0/lib64 -L/apps/Test/software/GCCcore/12.2.0/lib') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable EBVARLDFLAGS set to -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib64 -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib -L/apps/Test/software/GCCcore/12.2.0/lib64 -L/apps/Test/software/GCCcore/12.2.0/lib (previous value: '-L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib64 -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib -L/apps/Test/software/GCCcore/12.2.0/lib64 -L/apps/Test/software/GCCcore/12.2.0/lib') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable LIBBLAS set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable EBVARLIBBLAS set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable LIBBLAS_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable EBVARLIBBLAS_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable LIBFFT set to -lfftw3 (previous value: '-lfftw3') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable EBVARLIBFFT set to -lfftw3 (previous value: '-lfftw3') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable LIBFFT_MT set to -lfftw3 -lpthread (previous value: '-lfftw3 -lpthread') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable EBVARLIBFFT_MT set to -lfftw3 -lpthread (previous value: '-lfftw3 -lpthread') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable LIBLAPACK set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable EBVARLIBLAPACK set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable LIBLAPACK_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable EBVARLIBLAPACK_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable LIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:14:58,625 environment.py:93 INFO Environment variable LIBLAPACK_ONLY set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:14:58,626 environment.py:93 INFO Environment variable EBVARLIBLAPACK_ONLY set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:14:58,626 environment.py:93 INFO Environment variable LIBS set to -lm -lpthread (previous value: '-lm -lpthread') | |
| == 2024-11-28 13:14:58,626 environment.py:93 INFO Environment variable EBVARLIBS set to -lm -lpthread (previous value: '-lm -lpthread') | |
| == 2024-11-28 13:14:58,626 environment.py:93 INFO Environment variable OPTFLAGS set to -O1 -march=native (previous value: '-O1 -march=native') | |
| == 2024-11-28 13:14:58,626 environment.py:93 INFO Environment variable EBVAROPTFLAGS set to -O1 -march=native (previous value: '-O1 -march=native') | |
| == 2024-11-28 13:14:58,626 environment.py:93 INFO Environment variable PRECFLAGS set to -fno-math-errno (previous value: '-fno-math-errno') | |
| == 2024-11-28 13:14:58,626 environment.py:93 INFO Environment variable EBVARPRECFLAGS set to -fno-math-errno (previous value: '-fno-math-errno') | |
| == 2024-11-28 13:14:58,626 filetools.py:544 INFO Command python found at /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python | |
| == 2024-11-28 13:14:58,626 pythonpackage.py:205 INFO Python command being used: /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python | |
| == 2024-11-28 13:14:58,626 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-821afyf0 | |
| == 2024-11-28 13:14:58,626 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-821afyf0/out.txt | |
| == 2024-11-28 13:14:58,649 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:58,649 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'' in /mimer/NOBACKUP/groups/c3-staff/vikren/build/easybuild | |
| == 2024-11-28 13:14:58,695 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| 3.10.8 | |
| == 2024-11-28 13:14:58,695 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])' | |
| == 2024-11-28 13:14:58,696 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-85pzpleu | |
| == 2024-11-28 13:14:58,696 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-85pzpleu/out.txt | |
| == 2024-11-28 13:14:58,718 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:58,719 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'' in /mimer/NOBACKUP/groups/c3-staff/vikren/build/easybuild | |
| == 2024-11-28 13:14:59,018 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| /tmp/lib/python3.10/site-packages | |
| == 2024-11-28 13:14:59,018 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))' | |
| == 2024-11-28 13:14:59,019 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-f0bnelaw | |
| == 2024-11-28 13:14:59,019 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-f0bnelaw/out.txt | |
| == 2024-11-28 13:14:59,042 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:59,042 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'' in /mimer/NOBACKUP/groups/c3-staff/vikren/build/easybuild | |
| == 2024-11-28 13:14:59,086 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| 3.10.8 | |
| == 2024-11-28 13:14:59,086 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])' | |
| == 2024-11-28 13:14:59,087 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-giexvjep | |
| == 2024-11-28 13:14:59,087 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-giexvjep/out.txt | |
| == 2024-11-28 13:14:59,109 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:59,109 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'' in /mimer/NOBACKUP/groups/c3-staff/vikren/build/easybuild | |
| == 2024-11-28 13:14:59,396 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| /tmp/lib/python3.10/site-packages | |
| == 2024-11-28 13:14:59,396 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))' | |
| == 2024-11-28 13:14:59,397 filetools.py:1954 INFO Creating directory /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran (parents: True, set_gid: False, sticky: False) | |
| == 2024-11-28 13:14:59,397 run.py:453 INFO run_shell_cmd: command environment of "tar xzf /apps/sources/s/SciPy-bundle/extensions/pythran-0.12.1.tar.gz" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/tar-roai0rfb | |
| == 2024-11-28 13:14:59,397 run.py:456 INFO run_shell_cmd: Output of "tar xzf /apps/sources/s/SciPy-bundle/extensions/pythran-0.12.1.tar.gz" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/tar-roai0rfb/out.txt | |
| == 2024-11-28 13:14:59,422 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:59,422 run.py:503 INFO Running shell command 'tar xzf /apps/sources/s/SciPy-bundle/extensions/pythran-0.12.1.tar.gz' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran | |
| == 2024-11-28 13:14:59,688 run.py:618 INFO Output of 'tar ...' shell command (stdout + stderr): | |
| == 2024-11-28 13:14:59,688 run.py:621 INFO Shell command completed successfully (see output above): tar xzf /apps/sources/s/SciPy-bundle/extensions/pythran-0.12.1.tar.gz | |
| == 2024-11-28 13:14:59,689 build_log.py:322 INFO configuring... | |
| == 2024-11-28 13:14:59,689 environment.py:93 INFO Environment variable PYTHONNOUSERSITE set to 1 (previous value: '1') | |
| == 2024-11-28 13:14:59,689 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-a68wmgoh | |
| == 2024-11-28 13:14:59,689 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-a68wmgoh/out.txt | |
| == 2024-11-28 13:14:59,711 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:59,711 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:14:59,755 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| 3.10.8 | |
| == 2024-11-28 13:14:59,755 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])' | |
| == 2024-11-28 13:14:59,756 pythonpackage.py:790 INFO Checking of $LDSHARED auto-enabled for sufficiently recent Python version 3.10.8 | |
| == 2024-11-28 13:14:59,756 pythonpackage.py:802 INFO Python's value for $LDSHARED ('gcc -pthread -shared -Wl,-z,relro -Wl,-z,now -g -Wl,-z,relro -Wl,-z,now -g') uses current $CC value ('gcc'), not touching it | |
| == 2024-11-28 13:14:59,756 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -V; /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print(sys.executable, sys.path)'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-gx773sw8 | |
| == 2024-11-28 13:14:59,756 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -V; /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print(sys.executable, sys.path)'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-gx773sw8/out.txt | |
| == 2024-11-28 13:14:59,780 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:59,780 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -V; /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print(sys.executable, sys.path)'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:14:59,826 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| Python 3.10.8 | |
| /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ['', '/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages', '/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/lib/python3.10/site-packages', '/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/lib/python3.10/site-packages', '/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/lib/python3.10/site-packages', '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/easybuild/python', '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/lib/python310.zip', '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/lib/python3.10', '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/lib/python3.10/lib-dynload', '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/lib/python3.10/site-packages'] | |
| == 2024-11-28 13:14:59,826 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -V; /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print(sys.executable, sys.path)' | |
| == 2024-11-28 13:14:59,826 build_log.py:322 INFO building... | |
| == 2024-11-28 13:14:59,827 build_log.py:322 INFO testing... | |
| == 2024-11-28 13:14:59,827 build_log.py:322 INFO installing... | |
| == 2024-11-28 13:14:59,827 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-8rz0qmss | |
| == 2024-11-28 13:14:59,827 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-8rz0qmss/out.txt | |
| == 2024-11-28 13:14:59,850 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:59,850 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:14:59,895 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| 3.10.8 | |
| == 2024-11-28 13:14:59,896 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])' | |
| == 2024-11-28 13:14:59,896 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-ffkvy0kd | |
| == 2024-11-28 13:14:59,896 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-ffkvy0kd/out.txt | |
| == 2024-11-28 13:14:59,919 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:59,919 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:14:59,963 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| posix_prefix | |
| == 2024-11-28 13:14:59,963 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())' | |
| == 2024-11-28 13:14:59,963 pythonpackage.py:344 INFO Active Python installation scheme: posix_prefix | |
| == 2024-11-28 13:14:59,963 environment.py:93 INFO Environment variable PYTHONPATH set to /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/easybuild/python (previous value: '/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/easybuild/python') | |
| == 2024-11-28 13:14:59,964 environment.py:93 INFO Environment variable PATH set to /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin:/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/bin:/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/bin:/apps/Test/software/pkgconf/1.9.3-GCCcore-12.2.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.2.0/bin:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/bin:/apps/Test/software/UnZip/6.0-GCCcore-12.2.0/bin:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/bin:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.2.7-GCCcore-12.2.0/bin:/apps/Test/software/SQLite/3.39.4-GCCcore-12.2.0/bin:/apps/Test/software/Tcl/8.6.12-GCCcore-12.2.0/bin:/apps/Test/software/ncurses/6.3-GCCcore-12.2.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.2.0/bin:/apps/Test/software/binutils/2.39-GCCcore-12.2.0/bin:/apps/Test/software/GCCcore/12.2.0/bin:/cephyr/users/c3-builder/Alvis/vikren/easybuild/framework:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin (previous value: '/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/bin:/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/bin:/apps/Test/software/pkgconf/1.9.3-GCCcore-12.2.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.2.0/bin:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/bin:/apps/Test/software/UnZip/6.0-GCCcore-12.2.0/bin:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/bin:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.2.7-GCCcore-12.2.0/bin:/apps/Test/software/SQLite/3.39.4-GCCcore-12.2.0/bin:/apps/Test/software/Tcl/8.6.12-GCCcore-12.2.0/bin:/apps/Test/software/ncurses/6.3-GCCcore-12.2.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.2.0/bin:/apps/Test/software/binutils/2.39-GCCcore-12.2.0/bin:/apps/Test/software/GCCcore/12.2.0/bin:/cephyr/users/c3-builder/Alvis/vikren/easybuild/framework:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin') | |
| == 2024-11-28 13:14:59,964 pythonpackage.py:303 INFO Determining pip version... | |
| == 2024-11-28 13:14:59,964 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -m pip --version" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-e9a_tipp | |
| == 2024-11-28 13:14:59,964 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -m pip --version" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-e9a_tipp/out.txt | |
| == 2024-11-28 13:14:59,985 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:14:59,985 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -m pip --version' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:15:00,300 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| pip 22.3.1 from /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/lib/python3.10/site-packages/pip (python 3.10) | |
| == 2024-11-28 13:15:00,300 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -m pip --version | |
| == 2024-11-28 13:15:00,300 pythonpackage.py:312 INFO Found pip version: 22.3.1 | |
| == 2024-11-28 13:15:00,301 pythonpackage.py:660 INFO Found pip version 22.3.1, OK | |
| == 2024-11-28 13:15:00,301 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -m pip install --prefix=/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b --no-deps --ignore-installed --no-index --no-build-isolation ." will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-bb6zum8q | |
| == 2024-11-28 13:15:00,301 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -m pip install --prefix=/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b --no-deps --ignore-installed --no-index --no-build-isolation ." will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-bb6zum8q/out.txt | |
| == 2024-11-28 13:15:00,325 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:00,325 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -m pip install --prefix=/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b --no-deps --ignore-installed --no-index --no-build-isolation .' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:15:13,179 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| Processing /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| Preparing metadata (setup.py): started | |
| Preparing metadata (setup.py): finished with status 'done' | |
| Building wheels for collected packages: pythran | |
| Building wheel for pythran (setup.py): started | |
| Building wheel for pythran (setup.py): finished with status 'done' | |
| Created wheel for pythran: filename=pythran-0.12.1-py3-none-any.whl size=4248341 sha256=f971f08bccd76394d5f46909d80cd9841c96fd557625b7746580d77e20213f73 | |
| Stored in directory: /dev/shm/eb-1vq_fu1o/pip-ephem-wheel-cache-sqwuc_bn/wheels/ab/4b/98/53f17214d20da10ca99fc372ac4047fd226bb072996e4f080b | |
| Successfully built pythran | |
| Installing collected packages: pythran | |
| Successfully installed pythran-0.12.1 | |
| == 2024-11-28 13:15:13,179 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -m pip install --prefix=/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b --no-deps --ignore-installed --no-index --no-build-isolation . | |
| == 2024-11-28 13:15:13,180 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-l1zabokl | |
| == 2024-11-28 13:15:13,180 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-l1zabokl/out.txt | |
| == 2024-11-28 13:15:13,204 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:13,204 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:15:13,251 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| 3.10.8 | |
| == 2024-11-28 13:15:13,251 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])' | |
| == 2024-11-28 13:15:13,252 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-c8tmgrhn | |
| == 2024-11-28 13:15:13,252 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-c8tmgrhn/out.txt | |
| == 2024-11-28 13:15:13,275 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:13,275 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:15:13,323 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| posix_prefix | |
| == 2024-11-28 13:15:13,323 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())' | |
| == 2024-11-28 13:15:13,323 pythonpackage.py:344 INFO Active Python installation scheme: posix_prefix | |
| == 2024-11-28 13:15:13,323 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-yp8rfuq1 | |
| == 2024-11-28 13:15:13,323 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-yp8rfuq1/out.txt | |
| == 2024-11-28 13:15:13,346 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:13,346 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:15:13,391 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| 3.10.8 | |
| == 2024-11-28 13:15:13,391 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])' | |
| == 2024-11-28 13:15:13,391 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-d_6sh3xr | |
| == 2024-11-28 13:15:13,391 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-d_6sh3xr/out.txt | |
| == 2024-11-28 13:15:13,415 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:13,415 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/pythran/pythran-0.12.1 | |
| == 2024-11-28 13:15:13,461 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| posix_prefix | |
| == 2024-11-28 13:15:13,462 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sysconfig; print(sysconfig.get_default_scheme())' | |
| == 2024-11-28 13:15:13,462 pythonpackage.py:344 INFO Active Python installation scheme: posix_prefix | |
| == 2024-11-28 13:15:13,462 easyblock.py:3029 INFO Path to 'env' command to use in patched shebang lines: /usr/bin/env | |
| == 2024-11-28 13:15:13,463 easyblock.py:3044 INFO Fixing 'python' shebang to '#!/usr/bin/env python' for files that match 'bin/*': ['/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/f2py3.10', '/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/f2py', '/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/f2py3', '/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/pythran-config', '/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/pythran'] | |
| == 2024-11-28 13:15:13,464 filetools.py:265 INFO Overwriting existing file /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/f2py3.10 | |
| == 2024-11-28 13:15:13,465 filetools.py:265 INFO Overwriting existing file /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/f2py | |
| == 2024-11-28 13:15:13,467 filetools.py:265 INFO Overwriting existing file /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/f2py3 | |
| == 2024-11-28 13:15:13,467 filetools.py:265 INFO Overwriting existing file /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/pythran-config | |
| == 2024-11-28 13:15:13,468 filetools.py:265 INFO Overwriting existing file /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin/pythran | |
| == 2024-11-28 13:15:13,469 environment.py:93 INFO Environment variable PYTHONPATH set to /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/easybuild/python (previous value: '/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/easybuild/python') | |
| == 2024-11-28 13:15:13,469 environment.py:93 INFO Environment variable PATH set to /apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/bin:/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/bin:/apps/Test/software/pkgconf/1.9.3-GCCcore-12.2.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.2.0/bin:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/bin:/apps/Test/software/UnZip/6.0-GCCcore-12.2.0/bin:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/bin:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.2.7-GCCcore-12.2.0/bin:/apps/Test/software/SQLite/3.39.4-GCCcore-12.2.0/bin:/apps/Test/software/Tcl/8.6.12-GCCcore-12.2.0/bin:/apps/Test/software/ncurses/6.3-GCCcore-12.2.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.2.0/bin:/apps/Test/software/binutils/2.39-GCCcore-12.2.0/bin:/apps/Test/software/GCCcore/12.2.0/bin:/cephyr/users/c3-builder/Alvis/vikren/easybuild/framework:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin (previous value: '/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin:/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/bin:/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/bin:/apps/Test/software/pkgconf/1.9.3-GCCcore-12.2.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.2.0/bin:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/bin:/apps/Test/software/UnZip/6.0-GCCcore-12.2.0/bin:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/bin:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.2.7-GCCcore-12.2.0/bin:/apps/Test/software/SQLite/3.39.4-GCCcore-12.2.0/bin:/apps/Test/software/Tcl/8.6.12-GCCcore-12.2.0/bin:/apps/Test/software/ncurses/6.3-GCCcore-12.2.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.2.0/bin:/apps/Test/software/binutils/2.39-GCCcore-12.2.0/bin:/apps/Test/software/GCCcore/12.2.0/bin:/cephyr/users/c3-builder/Alvis/vikren/easybuild/framework:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin') | |
| == 2024-11-28 13:15:13,470 build_log.py:322 INFO ... (took 14 secs) | |
| == 2024-11-28 13:15:13,470 easyblock.py:1963 INFO Starting extension scipy | |
| == 2024-11-28 13:15:13,470 build_log.py:322 INFO installing extension scipy 1.10.1 (6/11)... | |
| == 2024-11-28 13:15:13,471 run.py:503 INFO Running shell command '/usr/share/lmod/lmod/libexec/lmod python --terse list' in /mimer/NOBACKUP/groups/c3-staff/vikren/build/easybuild | |
| == 2024-11-28 13:15:13,563 run.py:615 INFO Output of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stdout only): | |
| import os | |
| os.environ["MODULEPATH"] = "/apps/Test/fmodules/all:/dev/shm/eb-1vq_fu1o/tmpvyastk5n/all:/apps/Common/fmodules/all"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "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"; | |
| os.environ["_ModuleTable003_"] = "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"; | |
| os.environ["_ModuleTable004_"] = "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"; | |
| os.environ["_ModuleTable005_"] = "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"; | |
| os.environ["_ModuleTable006_"] = "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"; | |
| os.environ["_ModuleTable007_"] = "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"; | |
| os.environ["_ModuleTable008_"] = "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"; | |
| os.environ["_ModuleTable009_"] = "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"; | |
| os.environ["_ModuleTable010_"] = "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"; | |
| os.environ["_ModuleTable011_"] = "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"; | |
| os.environ["_ModuleTable012_"] = "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"; | |
| os.environ["_ModuleTable013_"] = "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"; | |
| os.environ["_ModuleTable014_"] = "cmRlciA9IDQsCnByb3BUID0ge30sCnJlZl9jb3VudCA9IDIsCnN0YWNrRGVwdGggPSAyLApzdGF0dXMgPSAiYWN0aXZlIiwKdXNlck5hbWUgPSAiYnppcDIvMS4wLjgtR0NDY29yZS0xMi4yLjAiLAp3ViA9ICIwMDAwMDAwMDEuMDAwMDAwMDAwLjAwMDAwMDAwOC4qZ2NjY29yZS4qemZpbmFsLS4wMDAwMDAwMTIuMDAwMDAwMDAyLip6ZmluYWwiLAp9LApnZmJmID0gewpmbiA9ICIvYXBwcy9UZXN0L2Ztb2R1bGVzL2FsbC9nZmJmLzIwMjJiLmx1YSIsCmZ1bGxOYW1lID0gImdmYmYvMjAyMmIiLApsb2FkT3JkZXIgPSAyMywKcHJvcFQgPSB7fSwKcmVmX2NvdW50ID0gMSwKc3RhY2tEZXB0aCA9IDEsCnN0YXR1cyA9ICJhY3RpdmUiLAp1c2VyTmFtZSA9ICJnZmJmLzIwMjJiIiwK"; | |
| os.environ["_ModuleTable015_"] = "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"; | |
| os.environ["_ModuleTable016_"] = "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"; | |
| os.environ["_ModuleTable017_"] = "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"; | |
| os.environ["_ModuleTable018_"] = "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"; | |
| os.environ["_ModuleTable019_"] = "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"; | |
| os.environ["_ModuleTable020_"] = "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"; | |
| os.environ["_ModuleTable021_"] = "YXBwcy9UZXN0L2Ztb2R1bGVzL2FsbCIsICIvZGV2L3NobS9lYi0xdnFfZnUxby90bXB2eWFzdGs1bi9hbGwiLCAiL2FwcHMvQ29tbW9uL2Ztb2R1bGVzL2FsbCIsCn0sCnN5c3RlbUJhc2VNUEFUSCA9ICIvYXBwcy9Db21tb24vZm1vZHVsZXMvYWxsOi9hcHBzL0FyY2gvZm1vZHVsZXMvYWxsIiwKfQo="; | |
| os.environ["_ModuleTable_Sz_"] = "21"; | |
| _mlstatus = True | |
| == 2024-11-28 13:15:13,563 run.py:616 INFO Warnings and errors of '/usr/share/lmod/lmod/libexec/lmod ...' shell command (stderr only): | |
| GCCcore/12.2.0 | |
| zlib/1.2.12-GCCcore-12.2.0 | |
| binutils/2.39-GCCcore-12.2.0 | |
| bzip2/1.0.8-GCCcore-12.2.0 | |
| ncurses/6.3-GCCcore-12.2.0 | |
| libreadline/8.2-GCCcore-12.2.0 | |
| Tcl/8.6.12-GCCcore-12.2.0 | |
| SQLite/3.39.4-GCCcore-12.2.0 | |
| XZ/5.2.7-GCCcore-12.2.0 | |
| GMP/6.2.1-GCCcore-12.2.0 | |
| libffi/3.4.4-GCCcore-12.2.0 | |
| OpenSSL/1.1 | |
| Python/3.10.8-GCCcore-12.2.0 | |
| hypothesis/6.68.2-GCCcore-12.2.0 | |
| UnZip/6.0-GCCcore-12.2.0 | |
| Meson/0.64.0-GCCcore-12.2.0 | |
| Ninja/1.11.1-GCCcore-12.2.0 | |
| pkgconf/1.9.3-GCCcore-12.2.0 | |
| GCC/12.2.0 | |
| OpenBLAS/0.3.21-GCC-12.2.0 | |
| FlexiBLAS/3.2.1-GCC-12.2.0 | |
| FFTW/3.3.10-GCC-12.2.0 | |
| gfbf/2022b | |
| pybind11/2.10.3-GCCcore-12.2.0 | |
| SciPy-bundle/2023.02-gfbf-2022b | |
| == 2024-11-28 13:15:13,563 run.py:621 INFO Shell command completed successfully (see output above): /usr/share/lmod/lmod/libexec/lmod python --terse list | |
| == 2024-11-28 13:15:13,564 modules.py:619 INFO Checking whether gfbf/2022b exists... | |
| == 2024-11-28 13:15:13,565 modules.py:627 INFO Module gfbf/2022b not found in list of available modules, checking via 'module show'... | |
| == 2024-11-28 13:15:13,565 modules.py:647 INFO Result for existence check of gfbf/2022b module: True | |
| == 2024-11-28 13:15:13,565 toolchain.py:746 INFO List of toolchain dependency modules and toolchain definition match! | |
| == 2024-11-28 13:15:13,566 compiler.py:354 INFO _set_optimal_architecture: using march=native as optarch for x86_64/Intel. | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable BLAS_INC_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable EBVARBLAS_INC_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable BLAS_LAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable BLAS_LAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable BLAS_LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable BLAS_LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable BLAS_LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so') | |
| == 2024-11-28 13:15:13,575 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable BLAS_LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable EBVARBLAS_LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable BLAS_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable EBVARBLAS_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable BLAS_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable EBVARBLAS_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable BLAS_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable EBVARBLAS_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable BLAS_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable EBVARBLAS_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable BLAS_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable EBVARBLAS_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable CC set to gcc (previous value: 'gcc') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable EBVARCC set to gcc (previous value: 'gcc') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable CFLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable EBVARCFLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable CPPFLAGS set to -I/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include -I/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include -I/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '-I/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include -I/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include -I/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:15:13,576 environment.py:93 INFO Environment variable EBVARCPPFLAGS set to -I/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include -I/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include -I/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '-I/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include -I/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include -I/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable CXX set to g++ (previous value: 'g++') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable EBVARCXX set to g++ (previous value: 'g++') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable CXXFLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable EBVARCXXFLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable F77 set to gfortran (previous value: 'gfortran') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable EBVARF77 set to gfortran (previous value: 'gfortran') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable F90 set to gfortran (previous value: 'gfortran') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable EBVARF90 set to gfortran (previous value: 'gfortran') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable F90FLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable EBVARF90FLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable FC set to gfortran (previous value: 'gfortran') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable EBVARFC set to gfortran (previous value: 'gfortran') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable FCFLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable EBVARFCFLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable FFLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable EBVARFFLAGS set to -O1 -march=native -fno-math-errno -fPIC (previous value: '-O1 -march=native -fno-math-errno -fPIC') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable FFTW_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include') | |
| == 2024-11-28 13:15:13,577 environment.py:93 INFO Environment variable EBVARFFTW_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFTW_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable EBVARFFTW_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFTW_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable EBVARFFTW_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFTW_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable EBVARFFTW_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFTW_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable EBVARFFTW_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFTW_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable EBVARFFTW_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFT_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable EBVARFFT_INC_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/include') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFT_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable EBVARFFT_LIB_DIR set to /apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib (previous value: '/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFT_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable EBVARFFT_SHARED_LIBS set to libfftw3.so (previous value: 'libfftw3.so') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFT_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable EBVARFFT_SHARED_LIBS_MT set to libfftw3.so,libpthread.so (previous value: 'libfftw3.so,libpthread.so') | |
| == 2024-11-28 13:15:13,578 environment.py:93 INFO Environment variable FFT_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable EBVARFFT_STATIC_LIBS set to libfftw3.a (previous value: 'libfftw3.a') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable FFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable EBVARFFT_STATIC_LIBS_MT set to libfftw3.a,libpthread.a (previous value: 'libfftw3.a,libpthread.a') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable FLIBS set to -lgfortran (previous value: '-lgfortran') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable EBVARFLIBS set to -lgfortran (previous value: '-lgfortran') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable LAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable EBVARLAPACK_INC_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/include/flexiblas') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable LAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable EBVARLAPACK_LIB_DIR set to /apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib (previous value: '/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable LAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable EBVARLAPACK_MT_SHARED_LIBS set to libflexiblas.so,libgfortran.so,libpthread.so (previous value: 'libflexiblas.so,libgfortran.so,libpthread.so') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable LAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable EBVARLAPACK_MT_STATIC_LIBS set to libflexiblas.a,libgfortran.a,libpthread.a (previous value: 'libflexiblas.a,libgfortran.a,libpthread.a') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable LAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable EBVARLAPACK_SHARED_LIBS set to libflexiblas.so,libgfortran.so (previous value: 'libflexiblas.so,libgfortran.so') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable LAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable EBVARLAPACK_STATIC_LIBS set to libflexiblas.a,libgfortran.a (previous value: 'libflexiblas.a,libgfortran.a') | |
| == 2024-11-28 13:15:13,579 environment.py:93 INFO Environment variable LDFLAGS set to -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib64 -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib -L/apps/Test/software/GCCcore/12.2.0/lib64 -L/apps/Test/software/GCCcore/12.2.0/lib (previous value: '-L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib64 -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib -L/apps/Test/software/GCCcore/12.2.0/lib64 -L/apps/Test/software/GCCcore/12.2.0/lib') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLDFLAGS set to -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib64 -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib -L/apps/Test/software/GCCcore/12.2.0/lib64 -L/apps/Test/software/GCCcore/12.2.0/lib (previous value: '-L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib64 -L/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/lib -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib64 -L/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/lib -L/apps/Test/software/GCCcore/12.2.0/lib64 -L/apps/Test/software/GCCcore/12.2.0/lib') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable LIBBLAS set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLIBBLAS set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable LIBBLAS_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLIBBLAS_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable LIBFFT set to -lfftw3 (previous value: '-lfftw3') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLIBFFT set to -lfftw3 (previous value: '-lfftw3') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable LIBFFT_MT set to -lfftw3 -lpthread (previous value: '-lfftw3 -lpthread') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLIBFFT_MT set to -lfftw3 -lpthread (previous value: '-lfftw3 -lpthread') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable LIBLAPACK set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLIBLAPACK set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable LIBLAPACK_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLIBLAPACK_MT set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable LIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLIBLAPACK_MT_ONLY set to -lflexiblas -lgfortran -lpthread (previous value: '-lflexiblas -lgfortran -lpthread') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable LIBLAPACK_ONLY set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLIBLAPACK_ONLY set to -lflexiblas -lgfortran (previous value: '-lflexiblas -lgfortran') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable LIBS set to -lm -lpthread (previous value: '-lm -lpthread') | |
| == 2024-11-28 13:15:13,580 environment.py:93 INFO Environment variable EBVARLIBS set to -lm -lpthread (previous value: '-lm -lpthread') | |
| == 2024-11-28 13:15:13,581 environment.py:93 INFO Environment variable OPTFLAGS set to -O1 -march=native (previous value: '-O1 -march=native') | |
| == 2024-11-28 13:15:13,581 environment.py:93 INFO Environment variable EBVAROPTFLAGS set to -O1 -march=native (previous value: '-O1 -march=native') | |
| == 2024-11-28 13:15:13,581 environment.py:93 INFO Environment variable PRECFLAGS set to -fno-math-errno (previous value: '-fno-math-errno') | |
| == 2024-11-28 13:15:13,581 environment.py:93 INFO Environment variable EBVARPRECFLAGS set to -fno-math-errno (previous value: '-fno-math-errno') | |
| == 2024-11-28 13:15:13,581 filetools.py:544 INFO Command python found at /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python | |
| == 2024-11-28 13:15:13,581 pythonpackage.py:205 INFO Python command being used: /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python | |
| == 2024-11-28 13:15:13,581 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-kg3yod4n | |
| == 2024-11-28 13:15:13,581 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-kg3yod4n/out.txt | |
| == 2024-11-28 13:15:13,602 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:13,602 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'' in /mimer/NOBACKUP/groups/c3-staff/vikren/build/easybuild | |
| == 2024-11-28 13:15:13,647 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| 3.10.8 | |
| == 2024-11-28 13:15:13,647 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])' | |
| == 2024-11-28 13:15:13,647 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-5hx4sx9h | |
| == 2024-11-28 13:15:13,647 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-5hx4sx9h/out.txt | |
| == 2024-11-28 13:15:13,669 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:13,669 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'' in /mimer/NOBACKUP/groups/c3-staff/vikren/build/easybuild | |
| == 2024-11-28 13:15:13,977 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| /tmp/lib/python3.10/site-packages | |
| == 2024-11-28 13:15:13,977 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))' | |
| == 2024-11-28 13:15:13,977 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-ahq48bm1 | |
| == 2024-11-28 13:15:13,977 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-ahq48bm1/out.txt | |
| == 2024-11-28 13:15:14,000 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:14,001 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'' in /mimer/NOBACKUP/groups/c3-staff/vikren/build/easybuild | |
| == 2024-11-28 13:15:14,044 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| 3.10.8 | |
| == 2024-11-28 13:15:14,044 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])' | |
| == 2024-11-28 13:15:14,044 run.py:453 INFO run_shell_cmd: command environment of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-cjit9g98 | |
| == 2024-11-28 13:15:14,044 run.py:456 INFO run_shell_cmd: Output of "/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-cjit9g98/out.txt | |
| == 2024-11-28 13:15:14,067 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:14,067 run.py:503 INFO Running shell command '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))'' in /mimer/NOBACKUP/groups/c3-staff/vikren/build/easybuild | |
| == 2024-11-28 13:15:14,346 run.py:618 INFO Output of '/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python ...' shell command (stdout + stderr): | |
| /tmp/lib/python3.10/site-packages | |
| == 2024-11-28 13:15:14,346 run.py:621 INFO Shell command completed successfully (see output above): /apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin/python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=True, prefix="/tmp/"))' | |
| == 2024-11-28 13:15:14,347 filetools.py:1954 INFO Creating directory /dev/shm/SciPybundle/2023.02/gfbf-2022b/scipy (parents: True, set_gid: False, sticky: False) | |
| == 2024-11-28 13:15:14,347 run.py:453 INFO run_shell_cmd: command environment of "tar xzf /apps/sources/s/SciPy-bundle/extensions/scipy-1.10.1.tar.gz" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/tar-5pvmml_n | |
| == 2024-11-28 13:15:14,347 run.py:456 INFO run_shell_cmd: Output of "tar xzf /apps/sources/s/SciPy-bundle/extensions/scipy-1.10.1.tar.gz" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/tar-5pvmml_n/out.txt | |
| == 2024-11-28 13:15:14,370 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:14,370 run.py:503 INFO Running shell command 'tar xzf /apps/sources/s/SciPy-bundle/extensions/scipy-1.10.1.tar.gz' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/scipy | |
| == 2024-11-28 13:15:15,551 run.py:618 INFO Output of 'tar ...' shell command (stdout + stderr): | |
| == 2024-11-28 13:15:15,552 run.py:621 INFO Shell command completed successfully (see output above): tar xzf /apps/sources/s/SciPy-bundle/extensions/scipy-1.10.1.tar.gz | |
| == 2024-11-28 13:15:15,553 easyblock.py:2676 INFO Applying patch scipy-1.10.1_disable-tests.patch | |
| == 2024-11-28 13:15:15,554 run.py:453 INFO run_shell_cmd: command environment of "patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_disable-tests.patch" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/patch-njtnergy | |
| == 2024-11-28 13:15:15,554 run.py:456 INFO run_shell_cmd: Output of "patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_disable-tests.patch" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/patch-njtnergy/out.txt | |
| == 2024-11-28 13:15:15,579 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:15,579 run.py:503 INFO Running shell command 'patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_disable-tests.patch' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/scipy/scipy-1.10.1 | |
| == 2024-11-28 13:15:15,602 run.py:618 INFO Output of 'patch ...' shell command (stdout + stderr): | |
| patching file scipy/optimize/tests/test_milp.py | |
| patching file scipy/sparse/linalg/_eigen/arpack/tests/test_arpack.py | |
| patching file scipy/sparse/tests/test_construct.py | |
| == 2024-11-28 13:15:15,602 run.py:621 INFO Shell command completed successfully (see output above): patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_disable-tests.patch | |
| == 2024-11-28 13:15:15,602 easyblock.py:2676 INFO Applying patch scipy-1.10.1_xfail-aarch64_test_maxiter_worsening.patch | |
| == 2024-11-28 13:15:15,603 run.py:453 INFO run_shell_cmd: command environment of "patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_xfail-aarch64_test_maxiter_worsening.patch" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/patch-clcmmzdf | |
| == 2024-11-28 13:15:15,603 run.py:456 INFO run_shell_cmd: Output of "patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_xfail-aarch64_test_maxiter_worsening.patch" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/patch-clcmmzdf/out.txt | |
| == 2024-11-28 13:15:15,627 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:15,627 run.py:503 INFO Running shell command 'patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_xfail-aarch64_test_maxiter_worsening.patch' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/scipy/scipy-1.10.1 | |
| == 2024-11-28 13:15:15,650 run.py:618 INFO Output of 'patch ...' shell command (stdout + stderr): | |
| patching file scipy/sparse/linalg/_isolve/tests/test_iterative.py | |
| == 2024-11-28 13:15:15,650 run.py:621 INFO Shell command completed successfully (see output above): patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_xfail-aarch64_test_maxiter_worsening.patch | |
| == 2024-11-28 13:15:15,650 easyblock.py:2676 INFO Applying patch scipy-1.10.1_fix-lobpcg-test.patch | |
| == 2024-11-28 13:15:15,651 run.py:453 INFO run_shell_cmd: command environment of "patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_fix-lobpcg-test.patch" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/patch-0xuo8zjz | |
| == 2024-11-28 13:15:15,651 run.py:456 INFO run_shell_cmd: Output of "patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_fix-lobpcg-test.patch" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/patch-0xuo8zjz/out.txt | |
| == 2024-11-28 13:15:15,673 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:15,674 run.py:503 INFO Running shell command 'patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_fix-lobpcg-test.patch' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/scipy/scipy-1.10.1 | |
| == 2024-11-28 13:15:15,696 run.py:618 INFO Output of 'patch ...' shell command (stdout + stderr): | |
| patching file scipy/sparse/linalg/_eigen/lobpcg/tests/test_lobpcg.py | |
| == 2024-11-28 13:15:15,697 run.py:621 INFO Shell command completed successfully (see output above): patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_fix-lobpcg-test.patch | |
| == 2024-11-28 13:15:15,697 easyblock.py:2676 INFO Applying patch scipy-1.10.1_fix-test_det_and_ortho.patch | |
| == 2024-11-28 13:15:15,697 run.py:453 INFO run_shell_cmd: command environment of "patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_fix-test_det_and_ortho.patch" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/patch-lmt8b_su | |
| == 2024-11-28 13:15:15,697 run.py:456 INFO run_shell_cmd: Output of "patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_fix-test_det_and_ortho.patch" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/patch-lmt8b_su/out.txt | |
| == 2024-11-28 13:15:15,721 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:15,721 run.py:503 INFO Running shell command 'patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_fix-test_det_and_ortho.patch' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/scipy/scipy-1.10.1 | |
| == 2024-11-28 13:15:15,745 run.py:618 INFO Output of 'patch ...' shell command (stdout + stderr): | |
| patching file scipy/stats/tests/test_multivariate.py | |
| Hunk #1 succeeded at 1821 (offset -39 lines). | |
| == 2024-11-28 13:15:15,745 run.py:621 INFO Shell command completed successfully (see output above): patch -p1 -i /cephyr/users/c3-builder/Alvis/vikren/easybuild/configs/easybuild/easyconfigs/s/SciPy-bundle/scipy-1.10.1_fix-test_det_and_ortho.patch | |
| == 2024-11-28 13:15:15,745 build_log.py:322 INFO configuring... | |
| == 2024-11-28 13:15:15,745 run.py:453 INFO run_shell_cmd: command environment of "python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-zut5lm3z | |
| == 2024-11-28 13:15:15,745 run.py:456 INFO run_shell_cmd: Output of "python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-zut5lm3z/out.txt | |
| == 2024-11-28 13:15:15,769 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:15,769 run.py:503 INFO Running shell command 'python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/scipy/scipy-1.10.1 | |
| == 2024-11-28 13:15:15,817 run.py:618 INFO Output of 'python ...' shell command (stdout + stderr): | |
| 3.10.8 | |
| == 2024-11-28 13:15:15,817 run.py:621 INFO Shell command completed successfully (see output above): python -c 'import sys; print("%s.%s.%s" % sys.version_info[:3])' | |
| == 2024-11-28 13:15:15,818 run.py:453 INFO run_shell_cmd: command environment of "python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'" will be saved to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-7trtplah | |
| == 2024-11-28 13:15:15,818 run.py:456 INFO run_shell_cmd: Output of "python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'" will be logged to /dev/shm/eb-1vq_fu1o/run-shell-cmd-output/python-7trtplah/out.txt | |
| == 2024-11-28 13:15:15,839 run.py:493 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2024-11-28 13:15:15,840 run.py:503 INFO Running shell command 'python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))'' in /dev/shm/SciPybundle/2023.02/gfbf-2022b/scipy/scipy-1.10.1 | |
| == 2024-11-28 13:15:16,133 run.py:618 INFO Output of 'python ...' shell command (stdout + stderr): | |
| /tmp/lib/python3.10/site-packages | |
| == 2024-11-28 13:15:16,133 run.py:621 INFO Shell command completed successfully (see output above): python -c 'import distutils.sysconfig; print(distutils.sysconfig.get_python_lib(plat_specific=False, prefix="/tmp/"))' | |
| == 2024-11-28 13:15:16,133 environment.py:93 INFO Environment variable PYTHONPATH set to /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/easybuild/python (previous value: '/apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/lib/python3.10/site-packages:/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/lib/python3.10/site-packages:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/easybuild/python') | |
| == 2024-11-28 13:15:16,134 environment.py:93 INFO Environment variable PATH set to /apps/Test/software/SciPy-bundle/2023.02-gfbf-2022b/bin:/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/bin:/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/bin:/apps/Test/software/pkgconf/1.9.3-GCCcore-12.2.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.2.0/bin:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/bin:/apps/Test/software/UnZip/6.0-GCCcore-12.2.0/bin:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/bin:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.2.7-GCCcore-12.2.0/bin:/apps/Test/software/SQLite/3.39.4-GCCcore-12.2.0/bin:/apps/Test/software/Tcl/8.6.12-GCCcore-12.2.0/bin:/apps/Test/software/ncurses/6.3-GCCcore-12.2.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.2.0/bin:/apps/Test/software/binutils/2.39-GCCcore-12.2.0/bin:/apps/Test/software/GCCcore/12.2.0/bin:/cephyr/users/c3-builder/Alvis/vikren/easybuild/framework:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin (previous value: '/apps/Test/software/pybind11/2.10.3-GCCcore-12.2.0/bin:/apps/Test/software/FFTW/3.3.10-GCC-12.2.0/bin:/apps/Test/software/FlexiBLAS/3.2.1-GCC-12.2.0/bin:/apps/Test/software/pkgconf/1.9.3-GCCcore-12.2.0/bin:/apps/Test/software/Ninja/1.11.1-GCCcore-12.2.0/bin:/apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/bin:/apps/Test/software/UnZip/6.0-GCCcore-12.2.0/bin:/apps/Test/software/hypothesis/6.68.2-GCCcore-12.2.0/bin:/apps/Test/software/Python/3.10.8-GCCcore-12.2.0/bin:/apps/Test/software/OpenSSL/1.1/bin:/apps/Test/software/XZ/5.2.7-GCCcore-12.2.0/bin:/apps/Test/software/SQLite/3.39.4-GCCcore-12.2.0/bin:/apps/Test/software/Tcl/8.6.12-GCCcore-12.2.0/bin:/apps/Test/software/ncurses/6.3-GCCcore-12.2.0/bin:/apps/Test/software/bzip2/1.0.8-GCCcore-12.2.0/bin:/apps/Test/software/binutils/2.39-GCCcore-12.2.0/bin:/apps/Test/software/GCCcore/12.2.0/bin:/cephyr/users/c3-builder/Alvis/vikren/easybuild/framework:/cephyr/users/c3-builder/Alvis/.yarn/bin:/cephyr/users/c3-builder/Alvis/.config/yarn/global/node_modules/.bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/apps/bin:/cephyr/NOBACKUP/users/c3-builder/cargo/bin:/cephyr/users/c3-builder/Alvis/.local/bin:/cephyr/users/c3-builder/Alvis/bin') | |
| == 2024-11-28 13:15:16,138 filetools.py:544 INFO Command ninja found at /apps/Test/software/Ninja/1.11.1-GCCcore-12.2.0/bin/ninja | |
| == 2024-11-28 13:15:16,141 filetools.py:544 INFO Command meson found at /apps/Test/software/Meson/0.64.0-GCCcore-12.2.0/bin/meson | |
| == 2024-11-28 13:15:16,208 build_log.py:226 ERROR EasyBuild encountered an error (at easybuild/framework/easybuild/base/exceptions.py:126 in __init__): Use of unknown easyconfig parameter 'build_type' when getting parameter value (at easybuild/framework/easybuild/framework/easyconfig/easyconfig.py:1763 in __getitem__) | |
| == 2024-11-28 13:15:16,208 build_log.py:322 INFO ... (took 2 secs) | |
| == 2024-11-28 13:15:16,208 build_log.py:322 INFO ... (took 5 mins 35 secs) | |
| == 2024-11-28 13:15:16,208 filetools.py:2045 INFO Removing lock /apps/Test/software/.locks/_apps_Test_software_SciPy-bundle_2023.02-gfbf-2022b.lock... | |
| == 2024-11-28 13:15:16,213 filetools.py:400 INFO Path /apps/Test/software/.locks/_apps_Test_software_SciPy-bundle_2023.02-gfbf-2022b.lock successfully removed. | |
| == 2024-11-28 13:15:16,213 filetools.py:2049 INFO Lock removed: /apps/Test/software/.locks/_apps_Test_software_SciPy-bundle_2023.02-gfbf-2022b.lock | |
| == 2024-11-28 13:15:16,214 easyblock.py:327 INFO Closing log for application name SciPy-bundle version 2023.02 |
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