Created
June 28, 2018 11:34
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simulate relationships from a logistic curve, about Dragons because why not
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library(tidyverse) | |
set.seed(4812) | |
islands <- data_frame(area = | |
# runif(35, min = 0, max = 29) | |
rlnorm(35, meanlog = log(5), sdlog = log(3)) | |
) | |
dragon_response <- function(b0, b1){ | |
force(b0) | |
force(b1) | |
function(v) { | |
rethinking::logistic(b0 + b1 * v) | |
} | |
} | |
library(gganimate) | |
purrr::rerun(20, | |
islands %>% | |
mutate(area_centered = log(area) - mean(log(area)), | |
p_dragon = map_dbl(area_centered, dragon_response(1.1, 0.5)), | |
is_dragon = rbinom(length(p_dragon), 1, p_dragon))) %>% | |
bind_rows(.id = "frame") %>% | |
ggplot(aes(x = log(area), y = is_dragon, frame = frame)) + | |
geom_point() + | |
stat_smooth(method = "glm", method.args = list(family = "binomial")) + | |
geom_line(aes(x = area_centered + mean(log(area)), y = p_dragon)) + | |
theme_minimal()+ | |
theme(text = element_text(size = 16)) + | |
NULL | |
gganimate(interval = .2, title_frame = FALSE) |
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