Created
January 23, 2026 00:33
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An animation of posterior distribution with mixture normal model
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| library(dplyr) | |
| library(tidyr) | |
| library(ggplot2) | |
| library(gganimate) | |
| logsumexp2 =function (logx1,logx2){ | |
| logx1 + log1p(exp(logx2-logx1)) | |
| } | |
| llmixnorm <- function(par, y){ | |
| a0 <- par[1] | |
| b0 <- par[2] | |
| theta <- par[3] | |
| sum(logsumexp2(log(1-a0)+dnorm(y,log = TRUE), log(a0)+dnorm(y,b0,log = TRUE))) + | |
| dbeta(a0,theta,theta,log=TRUE) | |
| } | |
| N <- 100L | |
| set.seed(1); y11 <- c(rnorm(N/2),rnorm(N/2,0.5)) | |
| ggplot()+ | |
| geom_histogram(data=NULL, aes(x=y11), fill="grey70", bins=25)+ | |
| theme_bw(14)+labs(x="y", y="count") | |
| parms <- expand.grid(a=seq(0.01,0.99,length.out = 60), | |
| b=seq(0,1,length.out = 60), | |
| theta=seq(0.5,2,by=0.1)) | |
| l11 <- apply(parms, 1, llmixnorm, y=y11) | |
| dfL11 <- data.frame(parms, posterior = exp(l11)) %>% | |
| mutate(prior = dbeta(a, theta,theta)) %>% | |
| pivot_longer(posterior:prior) %>% | |
| group_by(theta, name) %>% | |
| mutate(value = value/max(value)) %>% | |
| ungroup() | |
| head(dfL11) | |
| pp <- ggplot(dfL11,aes(x=a,y=b,colour=value))+ | |
| geom_point(pch=15, size=3.5)+ | |
| scale_colour_continuous(type = "viridis")+ | |
| labs(title = 'theta: {round(frame_time,2)}') + | |
| transition_time(theta)+ | |
| facet_wrap(~name)+ | |
| theme_bw(14)+theme(legend.position = "none") | |
| animate( | |
| pp, | |
| renderer = gifski_renderer("post_mixnorm.gif") | |
| ) |
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