Created
May 29, 2015 22:08
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Beautiful two-communities-graph layout
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import igraph | |
clusters_const = 2 | |
graph = igraph.read("2_big_graph_clusters_ncol.txt", format="ncol", directed=False, names=True) | |
clusters = graph.community_edge_betweenness(clusters=2, directed=False) | |
splitter = clusters.as_clustering(clusters_const).membership | |
vs = igraph.VertexSeq(graph) | |
def get_community_map(community_id, color_to_be_set): | |
map = {} | |
for v, index in zip(vs, range(len(vs))): #todo: get vertices ids from igraph.Vertex, not zipping | |
if splitter[index] == community_id: | |
map[index] = v['name'] | |
v['color'] = color_to_be_set | |
v['label'] = v['name'] | |
return map | |
map_1 = get_community_map(0, (0.9, 1.0, 0.9)) | |
map_2 = get_community_map(1, (0.9, 0.9, 1.0)) | |
# printing communities labels | |
print "community of size", len(map_1), ",".join(map_1.values()) | |
print "community of size", len(map_2), ",".join(map_2.values()) | |
# printing intercluster connections | |
for c1 in map_1.keys(): | |
for c2 in map_2.keys(): | |
if graph.get_eid(c1, c2, directed=False, error=False) != -1: | |
print map_1[c1], "--", map_2[c2], | |
# See for tuning http://igraph.org/python/doc/igraph.Graph-class.html#__plot__ | |
igraph.plot(graph, vertex_frame_width=0.5, vertex_frame_color="gray", edge_width=0.5, edge_color="gray") |
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