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October 16, 2015 19:27
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final_matrix
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| C G A T A C G T T | |
| M: 0 Ix: 0 Iy: -2 ______ | M: -- Ix: -- Iy: -3 ______ | M: -- Ix: -- Iy: -4 ______ | M: -- Ix: -- Iy: -5 ______ | M: -- Ix: -- Iy: -6 ______ | M: -- Ix: -- Iy: -7 ______ | M: -- Ix: -- Iy: -8 ______ | M: -- Ix: -- Iy: -9 ______ | M: -- Ix: -- Iy: -10 ______ | M: -- Ix: -- Iy: -11 ______ | | |
| A ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: -1 Ix: -- Iy: -- :M____ | M: -4 Ix: -- Iy: -4 :y__:M | M: -3 Ix: -- Iy: -5 :y__:y | M: -6 Ix: -- Iy: -6 :y__:M | M: -5 Ix: -- Iy: -7 :y__:y | M: -8 Ix: -- Iy: -8 :y__:M | M: -9 Ix: -- Iy: -9 :y__:y | M: -10 Ix: -- Iy: -10 :y__:y | M: -11 Ix: -- Iy: -11 :y__:y | | |
| C ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: 1 Ix: -4 Iy: -- :x:M__ | M: -2 Ix: -7 Iy: -2 :M:M:M | M: -5 Ix: -6 Iy: -3 :M:M:y | M: -4 Ix: -9 Iy: -4 :M:M:y | M: -7 Ix: -8 Iy: -5 :M:M:y | M: -4 Ix: -11 Iy: -6 :M:M:y | M: -9 Ix: -12 Iy: -7 :M:M:M | M: -10 Ix: -13 Iy: -8 :M:M:y | M: -11 Ix: -14 Iy: -9 :M:M:y | | |
| T ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: -1 Ix: -2 Iy: -- :x:M__ | M: 0 Ix: -5 Iy: -4 :M:M:M | M: -3 Ix: -7 Iy: -3 :M:x:M | M: -2 Ix: -7 Iy: -4 :y:M:y | M: -5 Ix: -9 Iy: -5 :M:x:M | M: -6 Ix: -7 Iy: -6 :y:M:y | M: -5 Ix: -12 Iy: -7 :M:M:y | M: -6 Ix: -13 Iy: -8 :y:M:M | M: -7 Ix: -14 Iy: -9 :y:M:M | | |
| C ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: 1 Ix: -3 Iy: -- :x:x__ | M: -2 Ix: -3 Iy: -2 :M:M:M | M: -1 Ix: -6 Iy: -3 :M:M:y | M: -4 Ix: -5 Iy: -4 :M:M:M | M: -3 Ix: -8 Iy: -5 :M:M:y | M: -4 Ix: -8 Iy: -6 :M:x:M | M: -7 Ix: -8 Iy: -7 :M:M:M | M: -6 Ix: -9 Iy: -8 :M:M:y | M: -7 Ix: -10 Iy: -9 :M:M:M | | |
| G ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: -1 Ix: -2 Iy: -- :x:M__ | M: 2 Ix: -4 Iy: -4 :M:x:M | M: -3 Ix: -4 Iy: -1 :M:M:M | M: -2 Ix: -6 Iy: -2 :M:x:y | M: -5 Ix: -6 Iy: -3 :M:M:y | M: -4 Ix: -7 Iy: -4 :M:M:y | M: -3 Ix: -9 Iy: -5 :M:x:y | M: -8 Ix: -9 Iy: -6 :M:M:M | M: -7 Ix: -10 Iy: -7 :M:M:y | | |
| A ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: -1 Ix: -3 Iy: -- :x:x__ | M: -2 Ix: -1 Iy: -4 :M:M:M | M: 3 Ix: -5 Iy: -5 :M:x:M | M: -2 Ix: -5 Iy: 0 :y:M:M | M: -1 Ix: -7 Iy: -1 :M:x:y | M: -4 Ix: -7 Iy: -2 :y:M:y | M: -5 Ix: -6 Iy: -3 :M:M:y | M: -4 Ix: -10 Iy: -4 :M:x:y | M: -7 Ix: -10 Iy: -5 :y:M:y | | |
| T ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: -1 Ix: -4 Iy: -- :x:M__ | M: -2 Ix: -2 Iy: -4 :M:x:M | M: -2 Ix: 0 Iy: -5 :x:M:M | M: 4 Ix: -5 Iy: -5 :M:M:M | M: -1 Ix: -4 Iy: 1 :y:M:M | M: -2 Ix: -7 Iy: 0 :M:M:y | M: -3 Ix: -7 Iy: -1 :y:x:y | M: -2 Ix: -7 Iy: -2 :y:M:y | M: -3 Ix: -10 Iy: -3 :M:M:y | | |
| C ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: 1 Ix: -4 Iy: -- :x:M__ | M: -2 Ix: -3 Iy: -2 :M:x:M | M: -3 Ix: -1 Iy: -3 :M:x:y | M: -1 Ix: 1 Iy: -4 :x:M:y | M: 3 Ix: -4 Iy: -4 :M:M:M | M: 2 Ix: -5 Iy: 0 :y:M:M | M: -1 Ix: -6 Iy: -1 :y:M:M | M: -2 Ix: -5 Iy: -2 :y:M:y | M: -3 Ix: -6 Iy: -3 :M:M:y | | |
| C ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: 1 Ix: -2 Iy: -- :x:M__ | M: 0 Ix: -4 Iy: -2 :M:x:M | M: -3 Ix: -2 Iy: -3 :M:x:M | M: -2 Ix: 0 Iy: -4 :x:x:y | M: 0 Ix: 0 Iy: -5 :x:M:M | M: 4 Ix: -1 Iy: -3 :M:M:M | M: 1 Ix: -4 Iy: 1 :M:M:M | M: -2 Ix: -5 Iy: 0 :M:M:y | M: -3 Ix: -6 Iy: -1 :M:M:y | | |
| A ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: -1 Ix: -2 Iy: -- :x:M__ | M: 0 Ix: -3 Iy: -4 :M:M:M | M: 1 Ix: -3 Iy: -3 :M:x:M | M: -3 Ix: -1 Iy: -2 :x:x:M | M: 1 Ix: -1 Iy: -3 :x:x:y | M: -1 Ix: 1 Iy: -2 :M:M:M | M: 3 Ix: -2 Iy: -3 :M:M:y | M: 0 Ix: -5 Iy: 0 :M:M:M | M: -1 Ix: -6 Iy: -1 :y:M:y | | |
| C ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: 1 Ix: -3 Iy: -- :x:x__ | M: -2 Ix: -3 Iy: -2 :M:M:M | M: -1 Ix: -2 Iy: -3 :M:M:y | M: 0 Ix: -2 Iy: -4 :M:x:M | M: -2 Ix: -2 Iy: -3 :x:M:M | M: 2 Ix: 0 Iy: -4 :M:x:y | M: 0 Ix: 0 Iy: -1 :x:M:M | M: 2 Ix: -3 Iy: -2 :M:M:y | M: -1 Ix: -4 Iy: -1 :M:M:M | | |
| G ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |
| M: -- Ix: 0 Iy: -- ______ | M: -1 Ix: -2 Iy: -- :x:M__ | M: 2 Ix: -4 Iy: -4 :M:x:M | M: -3 Ix: -3 Iy: -1 :M:x:M | M: -2 Ix: -3 Iy: -2 :M:M:y | M: -1 Ix: -3 Iy: -3 :M:x:y | M: -3 Ix: -1 Iy: -4 :M:M:M | M: 3 Ix: -1 Iy: -5 :M:x:y | M: -1 Ix: -1 Iy: 0 :M:M:M | M: 1 Ix: -4 Iy: -1 :M:M:y | | |
| ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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