Created
July 31, 2013 23:06
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Chromosome extents for hg19 with unmappable regions removed via BEDOPS partition and difference operations
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| chr1 10000 177417 167417 | |
| chr1 227417 267719 40302 | |
| chr1 317719 471368 153649 | |
| chr1 521368 2634220 2112852 | |
| chr1 2684220 3845268 1161048 | |
| chr1 3995268 13052998 9057730 | |
| chr1 13102998 13219912 116914 | |
| chr1 13319912 13557162 237250 | |
| chr1 13607162 17125658 3518496 | |
| chr1 17175658 29878082 12702424 | |
| chr1 30028082 103863906 73835824 | |
| chr1 103913906 120697156 16783250 | |
| chr1 120747156 120936695 189539 | |
| chr1 121086695 121485434 398739 | |
| chr1 142535434 142731022 195588 | |
| chr1 142781022 142967761 186739 | |
| chr1 143117761 143292816 175055 | |
| chr1 143342816 143544525 201709 | |
| chr1 143644525 143771002 126477 | |
| chr1 143871002 144095783 224781 | |
| chr1 144145783 144224481 78698 | |
| chr1 144274481 144401744 127263 | |
| chr1 144451744 144622413 170669 | |
| chr1 144672413 144710724 38311 | |
| chr1 144810724 145833118 1022394 | |
| chr1 145883118 146164650 281532 | |
| chr1 146214650 146253299 38649 | |
| chr1 146303299 148026038 1722739 | |
| chr1 148176038 148361358 185320 | |
| chr1 148511358 148684147 172789 | |
| chr1 148734147 148954460 220313 | |
| chr1 149004460 149459645 455185 | |
| chr1 149509645 205922707 56413062 | |
| chr1 206072707 206332221 259514 | |
| chr1 206482221 223747846 17265625 | |
| chr1 223797846 235192211 11394365 | |
| chr1 235242211 248908210 13665999 | |
| chr1 249058210 249240621 182411 | |
| chr10 60000 17974675 17914675 | |
| chr10 18024675 38818835 20794160 | |
| chr10 38868835 39154935 286100 | |
| chr10 42354935 42546687 191752 | |
| chr10 42596687 46426964 3830277 | |
| chr10 46476964 47429169 952205 | |
| chr10 47529169 47792476 263307 | |
| chr10 47892476 48055707 163231 | |
| chr10 48105707 49095536 989829 | |
| chr10 49195536 51137410 1941874 | |
| chr10 51187410 51398845 211435 | |
| chr10 51448845 125869472 74420627 | |
| chr10 125919472 128616069 2696597 | |
| chr10 128766069 133381404 4615335 | |
| chr10 133431404 133677527 246123 | |
| chr10 133727527 135524747 1797220 | |
| chr11 60000 1162759 1102759 | |
| chr11 1212759 50783853 49571094 | |
| chr11 51090853 51594205 503352 | |
| chr11 54694205 69089801 14395596 | |
| chr11 69139801 69724695 584894 | |
| chr11 69774695 87688378 17913683 | |
| chr11 87738378 96287584 8549206 | |
| chr11 96437584 134946516 38508932 | |
| chr12 60000 95739 35739 | |
| chr12 145739 7189876 7044137 | |
| chr12 7239876 34856694 27616818 | |
| chr12 37856694 109373470 71516776 | |
| chr12 109423470 122530623 13107153 | |
| chr12 122580623 132706992 10126369 | |
| chr12 132806992 133841895 1034903 | |
| chr13 19020000 86760324 67740324 | |
| chr13 86910324 112353994 25443670 | |
| chr13 112503994 114325993 1821999 | |
| chr13 114425993 114639948 213955 | |
| chr13 114739948 115109878 369930 | |
| chr14 19000000 107289540 88289540 | |
| chr15 20000000 20894633 894633 | |
| chr15 20935075 21398819 463744 | |
| chr15 21885000 22212114 327114 | |
| chr15 22262114 22596193 334079 | |
| chr15 22646193 23514853 868660 | |
| chr15 23564853 29159443 5594590 | |
| chr15 29209443 82829645 53620202 | |
| chr15 82879645 84984473 2104828 | |
| chr15 85034473 102521392 17486919 | |
| chr16 60000 8636921 8576921 | |
| chr16 8686921 34023150 25336229 | |
| chr16 34173150 35285801 1112651 | |
| chr16 46385801 88389383 42003582 | |
| chr16 88439383 90294753 1855370 | |
| chr17 0 296626 296626 | |
| chr17 396626 21566608 21169982 | |
| chr17 21666608 22263006 596398 | |
| chr17 25263006 34675848 9412842 | |
| chr17 34725848 62410760 27684912 | |
| chr17 62460760 77546461 15085701 | |
| chr17 77596461 79709049 2112588 | |
| chr17 79759049 81195210 1436161 | |
| chr18 10000 15410898 15400898 | |
| chr18 18510898 52059136 33548238 | |
| chr18 52209136 72283353 20074217 | |
| chr18 72333353 75721820 3388467 | |
| chr18 75771820 78017248 2245428 | |
| chr19 60000 7346004 7286004 | |
| chr19 7396004 8687198 1291194 | |
| chr19 8737198 20523415 11786217 | |
| chr19 20573415 24631782 4058367 | |
| chr19 27731782 59118983 31387201 | |
| chr2 10000 3529312 3519312 | |
| chr2 3579312 5018788 1439476 | |
| chr2 5118788 16279724 11160936 | |
| chr2 16329724 21153113 4823389 | |
| chr2 21178113 87668206 66490093 | |
| chr2 87718206 89630436 1912230 | |
| chr2 89830436 90321525 491089 | |
| chr2 90371525 90545103 173578 | |
| chr2 91595103 92326171 731068 | |
| chr2 95326171 110109337 14783166 | |
| chr2 110251337 149690582 39439245 | |
| chr2 149790582 234003741 84213159 | |
| chr2 234053741 239801978 5748237 | |
| chr2 239831978 240784132 952154 | |
| chr2 240809132 243102476 2293344 | |
| chr2 243152476 243189373 36897 | |
| chr20 60000 26319569 26259569 | |
| chr20 29419569 29653908 234339 | |
| chr20 29803908 34897085 5093177 | |
| chr20 34947085 61091437 26144352 | |
| chr20 61141437 61213369 71932 | |
| chr20 61263369 62965520 1702151 | |
| chr21 9411193 9595548 184355 | |
| chr21 9645548 9775437 129889 | |
| chr21 9825437 10034920 209483 | |
| chr21 10084920 10215976 131056 | |
| chr21 10365976 10647896 281920 | |
| chr21 10697896 11188129 490233 | |
| chr21 14338129 42955559 28617430 | |
| chr21 43005559 44632664 1627105 | |
| chr21 44682664 48119895 3437231 | |
| chr22 16050000 16697850 647850 | |
| chr22 16847850 20509431 3661581 | |
| chr22 20609431 50364777 29755346 | |
| chr22 50414777 51244566 829789 | |
| chr3 60000 66170270 66110270 | |
| chr3 66270270 90504854 24234584 | |
| chr3 93504854 194041961 100537107 | |
| chr3 194047251 197962430 3915179 | |
| chr4 10000 1423146 1413146 | |
| chr4 1478646 8799203 7320557 | |
| chr4 8818203 9274642 456439 | |
| chr4 9324642 31820917 22496275 | |
| chr4 31837417 32834638 997221 | |
| chr4 32840638 40296396 7455758 | |
| chr4 40297096 49338941 9041845 | |
| chr4 49488941 49660117 171176 | |
| chr4 52660117 59739333 7079216 | |
| chr4 59789333 75427379 15638046 | |
| chr4 75452279 191044276 115591997 | |
| chr5 10000 17530657 17520657 | |
| chr5 17580657 46405641 28824984 | |
| chr5 49405641 91636128 42230487 | |
| chr5 91686128 138787073 47100945 | |
| chr5 138837073 155138727 16301654 | |
| chr5 155188727 180905260 25716533 | |
| chr6 60000 58087659 58027659 | |
| chr6 58137659 58780166 642507 | |
| chr6 61880166 62128589 248423 | |
| chr6 62178589 95680543 33501954 | |
| chr6 95830543 157559467 61728924 | |
| chr6 157609467 157641300 31833 | |
| chr6 157691300 167942073 10250773 | |
| chr6 168042073 170279972 2237899 | |
| chr6 170329972 171055067 725095 | |
| chr7 10000 232484 222484 | |
| chr7 282484 50370631 50088147 | |
| chr7 50410631 58054331 7643700 | |
| chr7 61054331 61310513 256182 | |
| chr7 61360513 61460465 99952 | |
| chr7 61510465 61677020 166555 | |
| chr7 61727020 61917157 190137 | |
| chr7 61967157 74715724 12748567 | |
| chr7 74765724 100556043 25790319 | |
| chr7 100606043 130154523 29548480 | |
| chr7 130254523 139379377 9124854 | |
| chr7 139404377 142048195 2643818 | |
| chr7 142098195 142276197 178002 | |
| chr7 142326197 143347897 1021700 | |
| chr7 143397897 154270634 10872737 | |
| chr7 154370634 159128663 4758029 | |
| chr8 10000 7474649 7464649 | |
| chr8 7524649 12091854 4567205 | |
| chr8 12141854 43838887 31697033 | |
| chr8 46838887 48130499 1291612 | |
| chr8 48135599 86576451 38440852 | |
| chr8 86726451 142766515 56040064 | |
| chr8 142816515 145332588 2516073 | |
| chr8 145432588 146304022 871434 | |
| chr9 10000 39663686 39653686 | |
| chr9 39713686 39974796 261110 | |
| chr9 40024796 40233029 208233 | |
| chr9 40283029 40425834 142805 | |
| chr9 40475834 40940341 464507 | |
| chr9 40990341 41143214 152873 | |
| chr9 41193214 41365793 172579 | |
| chr9 41415793 42613955 1198162 | |
| chr9 42663955 43213698 549743 | |
| chr9 43313698 43946569 632871 | |
| chr9 43996569 44676646 680077 | |
| chr9 44726646 44908293 181647 | |
| chr9 44958293 45250203 291910 | |
| chr9 45350203 45815521 465318 | |
| chr9 45865521 46216430 350909 | |
| chr9 46266430 46461039 194609 | |
| chr9 46561039 47060133 499094 | |
| chr9 47160133 47317679 157546 | |
| chr9 65467679 65918360 450681 | |
| chr9 65968360 66192215 223855 | |
| chr9 66242215 66404656 162441 | |
| chr9 66454656 66614195 159539 | |
| chr9 66664195 66863343 199148 | |
| chr9 66913343 67107834 194491 | |
| chr9 67207834 67366296 158462 | |
| chr9 67516296 67987998 471702 | |
| chr9 68137998 68514181 376183 | |
| chr9 68664181 68838946 174765 | |
| chr9 68988946 69278385 289439 | |
| chr9 69328385 70010542 682157 | |
| chr9 70060542 70218729 158187 | |
| chr9 70318729 70506535 187806 | |
| chr9 70556535 70735468 178933 | |
| chr9 70835468 92343416 21507948 | |
| chr9 92443416 92528796 85380 | |
| chr9 92678796 133073060 40394264 | |
| chr9 133223060 137041193 3818133 | |
| chr9 137091193 139166997 2075804 | |
| chr9 139216997 141153431 1936434 | |
| chrM 0 16571 16571 | |
| chrX 60000 94821 34821 | |
| chrX 144821 231384 86563 | |
| chrX 281384 1047557 766173 | |
| chrX 1097557 1134113 36556 | |
| chrX 1184113 1264234 80121 | |
| chrX 1314234 2068238 754004 | |
| chrX 2118238 7623882 5505644 | |
| chrX 7673882 10738674 3064792 | |
| chrX 10788674 37098256 26309582 | |
| chrX 37148256 49242997 12094741 | |
| chrX 49292997 49974173 681176 | |
| chrX 50024173 52395914 2371741 | |
| chrX 52445914 58582012 6136098 | |
| chrX 61682012 76653692 14971680 | |
| chrX 76703692 113517668 36813976 | |
| chrX 113567668 115682290 2114622 | |
| chrX 115732290 120013235 4280945 | |
| chrX 120063235 143507324 23444089 | |
| chrX 143557324 148906424 5349100 | |
| chrX 148956424 149032062 75638 | |
| chrX 149082062 152277099 3195037 | |
| chrX 152327099 155260560 2933461 | |
| chrY 10000 44821 34821 | |
| chrY 94821 181384 86563 | |
| chrY 231384 997557 766173 | |
| chrY 1047557 1084113 36556 | |
| chrY 1134113 1214234 80121 | |
| chrY 1264234 2018238 754004 | |
| chrY 2068238 8914955 6846717 | |
| chrY 8964955 9241322 276367 | |
| chrY 9291322 10104553 813231 | |
| chrY 13104553 13143954 39401 | |
| chrY 13193954 13748578 554624 | |
| chrY 13798578 20143885 6345307 | |
| chrY 20193885 22369679 2175794 | |
| chrY 22419679 23901428 1481749 | |
| chrY 23951428 28819361 4867933 | |
| chrY 58819361 58917656 98295 | |
| chrY 58967656 59363566 395910 |
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