Last active
December 16, 2015 03:49
-
-
Save alexstorer/5373015 to your computer and use it in GitHub Desktop.
Plots for pdurbin!
We can make this file beautiful and searchable if this error is corrected: It looks like row 2 should actually have 1 column, instead of 2 in line 1.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
time seconds | |
1365781233.31362 0.815643072128296 | |
1365781253.95795 0.829960107803345 | |
1365781332.08635 0.819650888442993 | |
1365781371.6965 0.817964792251587 | |
1365781407.32883 1.21638607978821 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
# run this by typing: gnuplot phil.gnu | |
set terminal png # gnuplot recommends setting terminal before output | |
set output "output.png" # The output filename; to be set after setting | |
set title "Download Timing" | |
set style data fsteps | |
set xlabel "Date\nTime" | |
set timefmt "%s" | |
set yrange [ 0 : ] | |
set xdata time | |
set ylabel "Time\n(sec)" | |
set format x "%d/%m\n%H:%M" | |
set grid | |
plot 'data.tsv' using 1:2 with linespoints pointtype 5 |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
philplot <- function(floc) { | |
df <- read.table(floc,header=TRUE) | |
png(file = "plot.png") | |
plot(df[,1],df[,2]) | |
dev.off() | |
} | |
args <- commandArgs() | |
philplot(args[6]) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
# Before running, you must do the following | |
# 1. Open R | |
# 2. install.packages('ggplot2') | |
philplot <- function(floc) { | |
df <- read.table(floc,header=TRUE) | |
class(df[,1]) = c('POSIXt','POSIXct') | |
png(file = "plot.png") | |
p <- ggplot(df,aes(x=time,y=seconds)) + geom_point() + | |
scale_x_datetime(labels = date_format("%d-%b %H:%M:%S")) + | |
ylim(0,2) + theme(axis.text.x = element_text(angle = 45, hjust = 1)) | |
print(p) | |
dev.off() | |
} | |
library(ggplot2) | |
library(scales) | |
args <- commandArgs() | |
philplot(args[6]) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Rscript phil.R data.tsv |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment