Created
June 10, 2017 09:15
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geom_bar plot
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library(ggplot2) | |
library(tibble) | |
library(ggthemr) | |
setwd(dirname(rstudioapi::getActiveDocumentContext()$path)) | |
# rm(list = ls()) | |
ggthemr('pale', | |
layout = 'scientific', | |
spacing = 2, | |
type = 'inner') | |
SigTumor <- | |
data_frame( | |
tumor = c("ACC", "BLCA", "COAD", "DLBC", "FPPP", "HNSC", | |
"KICH", "LAML", "PAAD", "TGCT", "THYM", "UCEC"), | |
pvalue = c(12.04436579, 20.16520497, 68.27943137, | |
71.1663968, 67.00187081, 6.506952355, | |
4.024382401, 4.653271947, 3.448334588, | |
3.44587357, 3.574564826, 9.836858967)) | |
p <- | |
ggplot(SigTumor, aes(tumor, pvalue)) + | |
geom_bar(aes(fill = tumor), | |
stat = "identity", | |
width = 0.5) + | |
scale_fill_manual( | |
name = "Group", | |
values = c("#a6cee3", "#1f78b4", "#b2df8a", "#33a02c", | |
"#fb9a99", "#e31a1c", "#fdbf6f", "#ff7f00", | |
"#cab2d6", "#6a3d9a","#ffff99", "#b15928")) + | |
ylab("-ln(-pvalue)") | |
p | |
ggthemr_reset() |
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