Created
February 28, 2025 17:55
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render a projection below a volume in napari
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| import napari | |
| import mrcfile | |
| import torch | |
| from torch_fourier_slice import project_3d_to_2d | |
| volume = torch.tensor(mrcfile.read("run_class001.mrc")).float() | |
| projection = project_3d_to_2d(volume, rotation_matrices=torch.eye(3)) | |
| d, h, w = volume.shape | |
| viewer = napari.Viewer(ndisplay=3) | |
| viewer.add_image(volume.numpy(), translate=[d, 0, 0], name="volume") | |
| viewer.add_image(projection.numpy(), name="projection") | |
| napari.run() |
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