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Haversine distance between ODPostalCodes
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--- | |
title: "Haversine distance between ODPostalcodes" | |
output: | |
html_notebook: default | |
html_document: default | |
--- | |
```{r} | |
require("dplyr") | |
postalcodes <- read.csv(file.choose(), stringsAsFactors = FALSE, header=TRUE) | |
head(postalcodes) | |
``` | |
```{r} | |
dropcol <- c("oid") | |
postalcodes <- postalcodes[, ! names(postalcodes) %in% dropcol, drop = FALSE] | |
names(postalcodes)[names(postalcodes) == "postalcode"] <- "destination" | |
head(postalcodes) | |
``` | |
```{r} | |
input <- read.table(file.choose(), sep="\t", stringsAsFactors = FALSE, header=TRUE) | |
head(input) | |
``` | |
```{r} | |
dropcol <- c("id","raw") | |
input <- input[, ! names(input) %in% dropcol, drop = FALSE] | |
head(input) | |
``` | |
```{r} | |
merged <- left_join(input, postalcodes, by="destination") | |
head(merged) | |
``` | |
```{r} | |
names(merged)[names(merged) == "lon"] <- "destination.lon" | |
names(merged)[names(merged) == "lat"] <- "destination.lat" | |
head(merged) | |
``` | |
```{r} | |
names(postalcodes)[names(postalcodes) == "destination"] <- "origin" | |
head(postalcodes) | |
``` | |
```{r} | |
merged <- left_join(merged, postalcodes, by="origin") | |
head(merged) | |
``` | |
```{r} | |
names(merged)[names(merged) == "lon"] <- "origin.lon" | |
names(merged)[names(merged) == "lat"] <- "origin.lat" | |
head(merged) | |
``` | |
```{r} | |
library(geosphere) | |
myfn <- function(a,b,c,d) distHaversine(c(a,b),c(c,d)) | |
merged$dist <- mapply(myfn, merged$origin.lon, merged$origin.lat, merged$destination.lon, merged$destination.lat) | |
# Inferior implementation with a "for loop"" | |
# for(i in 1:dim(merged)[1]) { | |
# subset <- merged %>% slice(i) | |
# merged$dist[i] <- distHaversine( | |
# c(subset$origin.lon, subset$origin.lat), | |
# c(subset$destination.lon, subset$destination.lat) | |
# ) | |
# } | |
head(merged) | |
``` | |
```{r} | |
write.table(merged, 'distances.tsv', sep="\t") | |
``` |
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